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玉米生长素响应因子基因家族全基因组鉴定及表达分析 被引量:6
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作者 曹丽茹 张前进 +5 位作者 郭子宁 鲁晓民 张新 魏昕 皇甫柏树 王振华 《核农学报》 CAS CSCD 北大核心 2021年第9期2016-2026,共11页
生长素响应因子(ARF)在植物中可以特异性结合在应答基因的启动子区域,调控植物的生长发育。为了进一步了解玉米ARF基因家族的数量、基本特征、进化关系及响应非生物胁迫和激素的表达模式,本研究在全基因组水平,通过生物信息学方法鉴定玉... 生长素响应因子(ARF)在植物中可以特异性结合在应答基因的启动子区域,调控植物的生长发育。为了进一步了解玉米ARF基因家族的数量、基本特征、进化关系及响应非生物胁迫和激素的表达模式,本研究在全基因组水平,通过生物信息学方法鉴定玉米ARF基因家族,分析了蛋白理化性质及系统发育,利用实时荧光定量PCR(RT-qPCR)分析了4个ZmARFs基因的时空表达模式及高温、干旱、盐和脱落酸(ABA)处理下的表达情况。结果表明,玉米36个ARFs基因随机非均匀分布在9条染色体上,编码氨基酸长度、分子量、等电点及二级结构存在很大的差异。高粱、水稻、拟南芥和玉米的蛋白复合进化树显示共分为Ⅰ~Ⅳ四大类,玉米与高粱ARF蛋白亲缘关系最近,而与拟南芥ARF蛋白亲缘关系最远,且玉米中发生基因内和基因间复制现象。启动子顺式作用元件主要是干旱、低温、氧化和激素类响应元件。RT-qPCR结果显示,ZmARF1、ZmARF6、ZmARF13和ZmARF22基因均在雄穗分支和胚中表达量较高,在花粉中表达量较低;4个基因(除ZmARF22)在高温、干旱、盐和ABA诱导时均显著上调表达。亚细胞定位表明上述4个基因编码的蛋白质均定位于细胞核。本研究结果为揭示玉米ARF蛋白功能和挖掘玉米的抗逆基因提供了理论基础,为抗逆育种提供了分子资源。 展开更多
关键词 玉米 zmarfs 生物信息学 表达模式 细胞核
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An ARF24-ZmArf2 module influences kernel size in different maize haplotypes
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作者 Jie Gao Long Zhang +8 位作者 Haonan Du Yongbin Dong Sihan Zhen Chen Wang Qilei Wang Jingyu Yang Paifeng Zhang Xu Zheng Yuling Li 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2023年第7期1767-1781,共15页
Members of the ADP-ribosylation factor family,which are GTP-binding proteins, are involved in metabolite transport, cell division, and expansion.Although there has been a significant amount of research on small GTP-bi... Members of the ADP-ribosylation factor family,which are GTP-binding proteins, are involved in metabolite transport, cell division, and expansion.Although there has been a significant amount of research on small GTP-binding proteins, their roles and functions in regulating maize kernel size remain elusive. Here, we identified Zm Arf2 as a maize ADPribosylation factor-like family member that is highly conserved during evolution. Maize zmarf2 mutants showed a characteristic smaller kernel size. Conversely, ZmArf2 overexpression increased maize kernel size. Furthermore, heterologous expression of Zm Arf2 dramatically elevated Arabidopsis and yeast growth by promoting cell division. Using expression quantitative trait loci(e QTL) analysis, we determined that Zm Arf2 expression levels in various lines were mainly associated with variation at the gene locus. The promoters of Zm Arf2 genes could be divided into two types, p S and p L, that were significantly associated with both Zm Arf2 expression levels and kernel size. In yeast-one-hybrid screening, maize Auxin Response Factor 24(ARF24) is directly bound to the Zm Arf2 promoter region and negatively regulated Zm Arf2 expression.Notably, the p S and p L promoter types each contained an ARF24 binding element: an auxin response element(AuxRE) in p S and an auxin response region(Aux RR) in p L, respectively. ARF24binding affinity to Aux RR was much higher compared with Aux RE. Overall, our results establish that the small G-protein Zm Arf2 positively regulates maize kernel size and reveals the mechanism of its expression regulation. 展开更多
关键词 ARF24 auxin response maize kernel ZmArf2
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