With the fast development of livestock breeding,serious environmental pollution issues caused by the large accumulation of animal feces have arisen increasingly. It is of great importance to re-use these organic matte...With the fast development of livestock breeding,serious environmental pollution issues caused by the large accumulation of animal feces have arisen increasingly. It is of great importance to re-use these organic matter resources in order to ease the environmental and resource problems. And we reviews the significance of microorganism for livestock development and particularly the close relationship between microorganism and biodegradation of animal breeding residues. These bacteria play important roles in odor control,degradation and conversion of organic matters,and even the reduction of animal waste discharging amount by adjusting the feed nutrition proportion or improving the digestibility of nutrients. Consequently,it shows good application prospect of microbe practice in the improvement of contaminated environment resulting from livestock farming residues and the utilization of livestock manure resource.展开更多
Antarctica and the Arctic are the coldest places, containing a high diversity of microorganisms, including viruses,which are important components of polar ecosystems. However, owing to the difficulties in obtaining ac...Antarctica and the Arctic are the coldest places, containing a high diversity of microorganisms, including viruses,which are important components of polar ecosystems. However, owing to the difficulties in obtaining access to animal and environmental samples, the current knowledge of viromes in polar regions is still limited. To better understand polar viromes, this study performed a retrospective analysis using metagenomic sequencing data of animal feces from Antarctica and frozen soil from the Arctic collected during 2012–2014. The results reveal diverse communities of DNA and RNA viruses from at least 23 families from Antarctic animal feces and 16families from Arctic soils. Although the viral communities from Antarctica and the Arctic show a large diversity,they have genetic similarities with known viruses from different ecosystems and organisms with similar viral proteins. Phylogenetic analysis of Microviridae, Parvoviridae, and Larvidaviridae was further performed, and complete genomic sequences of two novel circular replication-associated protein(rep)-encoding single-stranded(CRESS) DNA viruses closely related to Circoviridae were identified. These results reveal the high diversity,complexity, and novelty of viral communities from polar regions, and suggested the genetic similarity and functional correlations of viromes between the Antarctica and Arctic. Variations in viral families in Arctic soils,Arctic freshwater, and Antarctic soils are discussed. These findings improve our understanding of polar viromes and suggest the importance of performing follow-up in-depth investigations of animal and environmental samples from Antarctica and the Arctic, which would reveal the substantial role of these viruses in the global viral community.展开更多
基金Supported by Industry,Study and Research Combined Project of Guangdong Provincial Department of Education,China(2012B091100402)Guangdong Technology Spark Program,China(2012A020602095)National Spark Plan Program,China(2013GA780071)
文摘With the fast development of livestock breeding,serious environmental pollution issues caused by the large accumulation of animal feces have arisen increasingly. It is of great importance to re-use these organic matter resources in order to ease the environmental and resource problems. And we reviews the significance of microorganism for livestock development and particularly the close relationship between microorganism and biodegradation of animal breeding residues. These bacteria play important roles in odor control,degradation and conversion of organic matters,and even the reduction of animal waste discharging amount by adjusting the feed nutrition proportion or improving the digestibility of nutrients. Consequently,it shows good application prospect of microbe practice in the improvement of contaminated environment resulting from livestock farming residues and the utilization of livestock manure resource.
基金supported by the Key Deployment Projects of Chinese Academy of Sciences(KJZD-SW-L11)the International Partnership Program from the Bureau of International Cooperation,Chinese Academy of Sciences(153B42KYSB20200013)+2 种基金the Strategic Priority Science and Technology Program of Chinese Academy of Sciences(Category B)(XDB42000000)the National Natural Science Foundation of China(grant no.31900154)the Chinese polar scientific strategy Research Fund(IC201706)
文摘Antarctica and the Arctic are the coldest places, containing a high diversity of microorganisms, including viruses,which are important components of polar ecosystems. However, owing to the difficulties in obtaining access to animal and environmental samples, the current knowledge of viromes in polar regions is still limited. To better understand polar viromes, this study performed a retrospective analysis using metagenomic sequencing data of animal feces from Antarctica and frozen soil from the Arctic collected during 2012–2014. The results reveal diverse communities of DNA and RNA viruses from at least 23 families from Antarctic animal feces and 16families from Arctic soils. Although the viral communities from Antarctica and the Arctic show a large diversity,they have genetic similarities with known viruses from different ecosystems and organisms with similar viral proteins. Phylogenetic analysis of Microviridae, Parvoviridae, and Larvidaviridae was further performed, and complete genomic sequences of two novel circular replication-associated protein(rep)-encoding single-stranded(CRESS) DNA viruses closely related to Circoviridae were identified. These results reveal the high diversity,complexity, and novelty of viral communities from polar regions, and suggested the genetic similarity and functional correlations of viromes between the Antarctica and Arctic. Variations in viral families in Arctic soils,Arctic freshwater, and Antarctic soils are discussed. These findings improve our understanding of polar viromes and suggest the importance of performing follow-up in-depth investigations of animal and environmental samples from Antarctica and the Arctic, which would reveal the substantial role of these viruses in the global viral community.