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亚洲棉(Gossypium arboreum L.)纤维次生壁加厚期NAC基因的鉴定与表达分析 被引量:4
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作者 王中娜 商海红 +12 位作者 陈婷婷 巩万奎 刘爱英 李俊文 石玉真 龚举武 葛群 王琳 李伟 李鹏涛 白志川 于杰 袁有禄 《棉花学报》 CSCD 北大核心 2016年第1期52-64,共13页
基于亚洲棉29729条纤维相关EST(Expressed sequence tag)序列和亚洲棉基因组序列,并结合雷蒙德氏棉(G.raimondii)NAC(NAM/ATAF/CUC)转录因子家族的研究结果,利用生物信息学方法,鉴定出143个亚洲棉NAC转录因子家族基因;利用实时荧光定量... 基于亚洲棉29729条纤维相关EST(Expressed sequence tag)序列和亚洲棉基因组序列,并结合雷蒙德氏棉(G.raimondii)NAC(NAM/ATAF/CUC)转录因子家族的研究结果,利用生物信息学方法,鉴定出143个亚洲棉NAC转录因子家族基因;利用实时荧光定量PCR技术对30个NAC转录因子构建表达图谱,鉴定出7个基因在亚洲棉纤维细胞次生壁加厚期优势表达,进一步明确了它们在亚洲棉、雷蒙德氏棉和陆地棉中的表达模式差异。利用RT-PCR(Reverse transcription-polymerase chain reaction)技术克隆得到了3个NAC基因全长c DNA,将其命名为Ga NAC20、Ga NAC09和Ga NAC69,初步的生物信息学分析发现Ga NAC20和Ga NAC09基因均含有3个外显子和2个内含子,Ga NAC69含有4个外显子和3个内含子,为进一步研究奠定了良好基础。 展开更多
关键词 亚洲棉(G.arboreum L.) 棉纤维 NAC转录因子 序列分析 结构分析 表达模式
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Antihyperglycemic and antihyperlipidemic activity of ethyl acetate fraction of Rhododendron arboreum Smith flowers in streptozotocin induced diabetic rats and its role in regulating carbohydrate metabolism 被引量:1
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作者 Neeraj Verma G Amresh +2 位作者 PK Sahu Ch V Rao Anil Pratap Singh 《Asian Pacific Journal of Tropical Biomedicine》 SCIE CAS 2012年第9期696-701,共6页
Objective:To explore and identify the most potent antihyperglycemic fraction from the ethanol extract of Rhododendron arboreum(R.arboreum)flowers.Methods:Normal and streptozotocin induced diabetic rats were treated wi... Objective:To explore and identify the most potent antihyperglycemic fraction from the ethanol extract of Rhododendron arboreum(R.arboreum)flowers.Methods:Normal and streptozotocin induced diabetic rats were treated with all four fractions of R.arboreum flowers for short term and with fraction 3 for long term study.On completion of the treatment,a range of indicators were tested including fasting blood glucose,plasma protein,haemoglobin A1C,insulin secretion,body weight,blood lipid profile and carbohydrate metabolism regulating enzymes of liver.Results:In short term study,the fraction 3(Active fraction)produced a significant(P<0.0001)reduction(73.6%)in blood glucose level at a dose of 200 mg/kg after the treatment in the diabetic rats.Administration of active fraction(200 and 400 mg/kg)once daily for 30 d in streptozotocin diabetic rats resulted in a significant(P<0.001 to P<0.0001)fall in blood glucose level,hemoglobin A1C,serum urea and creatinine with significant but a increase in insulin level similar to standard drug glybenclamide.Further,the active fraction showed antihyperlipidemic activity as evidenced by significant(P<0.001 to P<0.0001)decreases in serum serum total cholesterol,triglycerides,low density lipoprotein cholesterol and very low density cholesterol levels coupled together with elevation of high density lipoprotein cholesterol in the diabetic rats.Conclusions:The active fraction of R.arboreum flowers decreases streptozotocin induced hyperglycemia by promoting insulin secretion and glycolysis and by decreasing gluconeogenesis. 展开更多
关键词 ANTIHYPERGLYCEMIC ANTIHYPERLIPIDEMIC Ethanol FRACTION RHODODENDRON arboreum STREPTOZOTOCIN
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Sequencing of a Cultivated Diploid Cotton Genome-Gossypium arboreum 被引量:2
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作者 WILKINS Thea A 《棉花学报》 CSCD 北大核心 2008年第S1期5-,共1页
Sequencing the genomes of crop species and model systems contributes significantly to our understanding of the organization,structure and function of plant genomes.In a `white paper' published in 2007,the cotton c... Sequencing the genomes of crop species and model systems contributes significantly to our understanding of the organization,structure and function of plant genomes.In a `white paper' published in 2007,the cotton community set forth a strategic plan for sequencing the AD genome of cultivated upland cotton that initially targets less complex diploid genomes.This strategy banks on the high 展开更多
关键词 Sequencing of a Cultivated Diploid Cotton Genome-Gossypium arboreum GENE
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Genetic Diversity and Correlation Studies for Cotton Leaf Curl Disease (CLCuD), Fiber &Yield Related Attributes in Exotic Lines of <i>Gossypium arboreum</i>L.
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作者 Muhammad Idrees Khan Hafiz Abdul Haq +2 位作者 Kalim Ullah Muhammad Arshad Abdul Majid 《American Journal of Plant Sciences》 2017年第3期615-624,共10页
Genetic diversity provides the foundation for crop improvement. Genetic variation and associations among Cotton Leaf Curl Disease (CLCuD), fiber and yield related traits were investigated in exotic lines of Gossypium ... Genetic diversity provides the foundation for crop improvement. Genetic variation and associations among Cotton Leaf Curl Disease (CLCuD), fiber and yield related traits were investigated in exotic lines of Gossypium arboreum L. in an experimental field at the Central Cotton Research Institute (CCRI), Multan, Pakistan during the crop season 2011-12. One hundred and nineteen (119) accessions imported from USA through the Pakistan and US “Cotton Productivity Enhancement Program” (CPEP), were evaluated in this study. Various statistical approaches including descriptive statistics, correlation and principal component analysis was performed to evaluate and identify desirable genotypes. Results revealed that seed cotton yield was significantly and positively correlated with boll weight and number of bolls plant-1. Similarly, plant height was also significantly correlated with sympodial branches, lint percentage and micronaire value. Lint percentage showed a highly significant and positive correlation with plant height, sympodial branches and micronaire value. With respect to fiber traits, negative and significant relationships were observed between the micronaire value (MIC) and fiber strength. CLCuD showed no relationship with any of the studied traits, as all the G. arboreum L. lines evaluated were scored resistant to CLCuD. Principal component analysis (PCA) showed that the first four out of 11 components contributed about 65.88% of the total variation having an eigen value greater than 1. Based on PCA, the genotypes GS-4, GS-9, GS-8, GS-55 and GS-50 could be utilized successfully in a future breeding program based on having the highest positive loading factor for staple length (0.135) in PC1 and seed cotton yield (0.625), number of bolls plant-1, boll weight, first sympodial nod, staple length and fiber strength in PC2 respectively. 展开更多
关键词 Gossypium arboreum Genetic Diversity CLCuD YIELD LINT % Age FIBER Strength Principle Component Analysis and CORRELATION
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Tetraploid Induction and Identification of <i>Gossypium arboreum</i>
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作者 Na Yang Erhua Rong +4 位作者 Qianru Li Juan Dong Tianqin Du Xiaoming Zhao Yuxiang Wu 《Agricultural Sciences》 2015年第4期436-444,共9页
Gossypium arboreum (2n = 26, A2) is a diploid species with limited production in acreage com-pared with G. hirsutum and G. barbadense. However, its unique traits such as insect and disease resistance contribute an imp... Gossypium arboreum (2n = 26, A2) is a diploid species with limited production in acreage com-pared with G. hirsutum and G. barbadense. However, its unique traits such as insect and disease resistance contribute an important germplasm to cotton breeding. So polyploid manipulation for G. arboreum is an effective approach of germplasm development. This research focused on tetraploid induction of G. arboreum by colchicine. Morphology and cytology identifications for obtained mutants were also conducted. The seedling growth and development of all mutants was more stunted than controls. According to preliminary morphological characteristics, mutant rates in different treatment were statistically estimated and the highest mutant rate was 42.31% under the treatment of 0.1% colchicine for 24 hours. The chromosome number of most mutants was 2n = 4x = 52, while the chromosome number of diploid controls was 2n = 2x = 26 by cytology observation of root tip cells. By microscope observation of low leaf epidermis, there were significant differences for stoma area between tetraploids and diploids. The meiosis behavior of the induced tetraploid was much more complex than that of the diploid. At diakinesis, some univalent, trivalent and polyvalent were also observed besides bivalent and quadrivalent. There were different kinds of polyad in tetraspore period of mutants. The dissociate chromosomes existed during metaphase I and II, the unbalance separation of chromosomes existed during anaphase I and II. As a result, tetraploid mutants of G. arboreum were identified and their desirable traits would be further evaluated to incorporate into next breeding program. 展开更多
关键词 G. arboreum TETRAPLOID Induction KARYOTYPE Analysis CYTOLOGY IDENTIFICATION
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Identification and Cloning of Resistance Gene Analogues (RGAs) Encoding NBS-LRR Proteins from Gossypium arboreum L.
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作者 AZHAR Muhammad Tehseen BASHIR Aftab BRIDDON Rob W MANSOOR Shahid 《棉花学报》 CSCD 北大核心 2008年第S1期42-,共1页
Plants have developed a complicated defense mechanism during evolution to resist the harmful pathogens they encountered.The mechanism involves the interaction of the plant resistance(R)
关键词 NBS Encoding NBS-LRR Proteins from Gossypium arboreum L Identification and Cloning of Resistance Gene Analogues LRR RGAs
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Genetic diversity and population structure of Gossypium arboreum L. collected in China
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作者 JIA Yinhua PAN Zhaoe +5 位作者 HE Shoupu GONG Wenfang GENG Xiaoli PANG Baoyin WANG Liru DU Xiongming 《Journal of Cotton Research》 2018年第3期1-8,共8页
Background: Gossypium arboreum is a diploid species cultivated in the Old World. It possesses favorable characters that are valuable for developing superior cotton cultivars.Method: A set of 197 Gossypium arboreum acc... Background: Gossypium arboreum is a diploid species cultivated in the Old World. It possesses favorable characters that are valuable for developing superior cotton cultivars.Method: A set of 197 Gossypium arboreum accessions were genotyped using 80 genome-wide SSR markers to establish patterns of the genetic diversity and population structure. These accessions were collected from three major G. arboreum growing areas in China. A total of 255 alleles across 80 markers were identified in the genetic diversity analysis.Results: Three subgroups were found using the population structure analysis, corresponding to the Yangtze River Valley, North China, and Southwest China zones of G.arboreum growing areas in China. Average genetic distance and Polymorphic information content value of G. arboreum population were 0.34 and 0.47, respectively, indicating high genetic diversity in the G. arboreum germplasm pool. The Phylogenetic analysis results concurred with the subgroups identified by Structure analysis with a few exceptions. Variations among and within three groups were observed to be 13.61% and 86.39%, respectively.Conclusion: The information regarding genetic diversity and population structure from this study is useful for genetic and genomic analysis and systematic utilization of economically important traits in G. arboreum. 展开更多
关键词 GOSSYPIUM arboreum L. Population structure GENETIC diversity GENETIC DIFFERENTIATION Simple sequence repeat(SSR)markers
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Molecular Cloning,Expression,and Characterization of an Adenylyl Cyclase-associated Protein from Gossypium arboreum Fuzzless Mutant
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作者 WANG Sheng,ZHAO Guo-hong,JIA Yin-hua,DU Xiong-ming(Cotton Research Institute,Chinese Academy of Agricultural Sciences Key Laboratory of Cotton Genetic Improvement,Ministry of Agriculture,Anyang,Henan 455000,China) 《棉花学报》 CSCD 北大核心 2008年第S1期69-,共1页
CAP,an adenylyl cyclase-associated protein,is predicted to be involved in cytoskeletal organization and signal transduction.Recently,we found that CAP may play an important role in fuzz-like fiber cell initiation in c... CAP,an adenylyl cyclase-associated protein,is predicted to be involved in cytoskeletal organization and signal transduction.Recently,we found that CAP may play an important role in fuzz-like fiber cell initiation in cotton.For the further research,we isolated two CAP homologues from wild 展开更多
关键词 Molecular Cloning Expression and Characterization of an Adenylyl Cyclase-associated Protein from Gossypium arboreum Fuzzless Mutant CAP
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Genetic Diversity of Landraces in Gossypium arboreum L. Race sinense Assessed with Simple Sequence Repeat Markers 被引量:8
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作者 Wang-Zhen Guo Bao-Liang Zhou Lu-Ming Yang Wei Wang Tian-Zhen Zhang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2006年第9期1008-1017,共10页
Asiatic cotton (Gossypium arboreum L.) is an "Old World" cultivated cotton species, the sinense race of which is planted extensively in China. This species is still used in the current tetraploid cotton breeding p... Asiatic cotton (Gossypium arboreum L.) is an "Old World" cultivated cotton species, the sinense race of which is planted extensively in China. This species is still used in the current tetraploid cotton breeding program as an elite germplasm line, and is also used as a model for genomic research in Gossypium. In the present study, 60 cotton microsatellite markers, averaging 4.6 markers for each A-genome chromosome, were chosen to assess the genetic diversity of 109 accessions. These included 106 G. arboreum landraces, collected from 18 provinces throughout four Asiatic cotton-growing regions in China. A total of 128 alleles were detected, with an average of 2.13 alleles per locus. The largest number of alleles, as well as the maximum number of polymorphic loci, was detected in the A03 linkage group. No polymorphic alleles were detected on chromosome 10. The polymorphism information content for the 22 polymorphic microsatellite loci varied from 0.52 to 0.98, with an average of 0.89. Genetic diversity analysis revealed that the landraces in the Southern region had more genetic variability than those from the other two regions, and no significant difference was detected between landraces in the Yangtze and the Yellow River Valley regions. These findings are consistent with the history of sinense introduction, with the Southern region being the presumed center of origin for Chinese Asiatic cotton, and with subsequent northeastward extension to the Yangtze and Yellow River Valleys. Cluster analysis, based on simple sequence repeat data for 60 microsatellite loci, clearly differentiated Vietnamese and G. herbaceum landraces from the sinense landrace. No relationship between inter-variety similarity and geographical ecological region was observed. The present findings indicate that the Southern region landraces may have been directly introduced into the provinces in the middle and lower Yangtze River Valley, where Asiatic cotton was most extensively grown, and further race sinense crops were subsequently produced. 展开更多
关键词 genetic diversity Gossypium arboreum LANDRACES microsatellites
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Isolation and characterization of a sterile-dwarf mutant in Asian cotton (Gossypium arboreum L.) 被引量:6
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作者 Chuntai Wu Baoliang Zhou Tianzhen Zhang 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2009年第6期343-353,共11页
Plant height is an important trait in cotton. To elucidate the molecular mechanisms of the dwarf phenotype, a sterile-dwarf mutant derived from Gossypium arboreum L. cv. Jinhuazhongmian was developed by ^60Co y-ray ir... Plant height is an important trait in cotton. To elucidate the molecular mechanisms of the dwarf phenotype, a sterile-dwarf mutant derived from Gossypium arboreum L. cv. Jinhuazhongmian was developed by ^60Co y-ray irradiation. The results demonstrated that the steriledwarf mutant phenotype was controlled by a pair of recessive gene, which was designated sd^a. Plants carrying the sd^a gene contained lower levels of indole-3-acetic acid (IAA) and abscisic acid (ABA) compared with wild-type (WT) plants. The chlorophyll content and net photosynthetic rate in mutant leaves were markedly decreased. However, it was possible that ABA biosynthesis or signaling was involved in governing the sd^a phenotype. Semi-quantitative RT-PCR analysis detected 13 differentially expressed ESTs, and the steriledwarf mutant exhibited decreased expression levels relative to the WT. The role of nine potential hormone biosynthetic genes in the synthesis of IAA, ABA, polyamines (PAs) and jasmonic acid (JA) were discussed. 展开更多
关键词 Gossypium arboreum sd^a AUXIN abscisic acid ESTS
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Simple Sequence Repeat Genetic Linkage Maps of A-genome Diploid Cotton (Gossypium arboreum) 被引量:4
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作者 Xue-Xia Ma Bao-Liang Zhou Yan-Hui Lü Wang-Zhen Guo Tian-Zhen Zhang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2008年第4期491-502,共12页
This study introduces the construction of the first intraspecific genetic linkage map of the A-genome diploid cotton with newly developed simple sequence repeat (SSR) markers using 189 F2 plants derived from the cro... This study introduces the construction of the first intraspecific genetic linkage map of the A-genome diploid cotton with newly developed simple sequence repeat (SSR) markers using 189 F2 plants derived from the cross of two Asiatic cotton cultivars (Gossypium arboreum L.) Jianglingzhongmlan x Zhejiangxiaoshanl(ishu. Polymorphisms between the two parents were detected using 6 092 pairs of SSR primers. Two-hundred and sixty-eight pairs of SSR primers with better polymorphisms were picked out to analyze the F2 population. In total, 320 polymorphic bands were generated and used to construct a linkage map with JoinMap3.0. Two-hundred and sixty-seven loci, including three phenotypic traits were mapped at a logarithms of odds ratio (LOD)≥ 3.0 on 13 linkage groups. The total length of the map was 2 508.71 cM, and the average distance between adjacent markers was 9.40 cM. Chromosome assignments were according to the association of linkages with our backbone tetraploid specific map using the 89 similar SSR loci. Comparisons among the 13 suites of orthologous linkage groups revealed that the A-genome chromosomes are largely collinear with the At and Dt sub- genome chromosomes. Chromosomes associated with inversions suggested that allopolyploidization was accompanied by homologous chromosomal rearrangement. The inter-chromosomal duplicated loci supply molecular evidence that the A-genome diploid Asiatic cotton is paleopolyploid. 展开更多
关键词 DIPLOID genetic linkage map Gossypium arboreum molecular marker simple sequence repeat.
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Genome-wide analysis and expression profiling of the phospholipase D gene family in Gossypium arboreum 被引量:9
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作者 Kai TANG Chunjuan DONG Jinyuan LIU 《Science China(Life Sciences)》 SCIE CAS CSCD 2016年第2期130-141,共12页
The plant phospholipase D(PLD)plays versatile functions in multiple aspects of plant growth,development,and stress responses.However,until now,our knowledge concerning the PLD gene family members and their expression ... The plant phospholipase D(PLD)plays versatile functions in multiple aspects of plant growth,development,and stress responses.However,until now,our knowledge concerning the PLD gene family members and their expression patterns in cotton has been limited.In this study,we performed for the first time the genome-wide analysis and expression profiling of PLD gene family in Gossypium arboretum,and finally,a total of 19 non-redundant PLD genes(GaPLDs)were identified.Based on the phylogenetic analysis,they were divided into six well-supported clades(α,β/γ,δ,ε,ζ and φ).Most of the GaPLD genes within the same clade showed the similar exon-intron organization and highly conserved motif structures.Additionally,the chromosomal distribution pattern revealed that GaPLD genes were unevenly distributed across 10 of the 13 cotton chromosomes.Segmental duplication is the major contributor to the expansion of Ga PLD gene family and estimated to have occurred from19.61 to 20.44 million years ago when a recent large-scale genome duplication occurred in cotton.Moreover,the expression profiling provides the functional divergence of GaPLD genes in cotton and provides some new light on the molecular mechanisms of GaPLDα1 and GaPLDδ2 in fiber development. 展开更多
关键词 基因组分析 基因表达谱 基因家族 磷脂酶D 棉花 PLD基因 系统发育分析 分子机制
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亚洲棉短纤维发育相关长链非编码RNA的鉴定及表达 被引量:1
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作者 王晓阳 彭振 +5 位作者 邢爱双 赵盈睿 马欣丽 刘方 杜雄明 何守朴 《中国农业科学》 CAS CSCD 北大核心 2023年第23期4565-4584,I0001-I0003,共23页
【目的】长链非编码RNA(long non-coding RNAs,lncRNAs)是一类无蛋白质编码能力,但参与许多重要生命活动调控过程的长度大于200 nt的RNA。通过对亚洲棉无短纤维突变体(GA0149)和野生型(GA0146)纤维发育早期的转录组数据进行分析,挖掘调... 【目的】长链非编码RNA(long non-coding RNAs,lncRNAs)是一类无蛋白质编码能力,但参与许多重要生命活动调控过程的长度大于200 nt的RNA。通过对亚洲棉无短纤维突变体(GA0149)和野生型(GA0146)纤维发育早期的转录组数据进行分析,挖掘调控短纤维发育的lncRNA,并明确其调控网络,为进一步解析棉花纤维发育机制奠定基础。【方法】选择GA0146和GA01492个材料在开花后当天(0 DPA)及花后3 d(3 DPA)、5 d(5 DPA)和8 d(8 DPA)的胚珠和纤维为材料进行转录组测序。鉴定lncRNA并预测其调控的靶基因;通过mRNA和lncRNA的差异表达分析,比较2个材料在不同纤维发育时期的差异。进一步利用KOBAS软件预测对差异lncRNA的靶基因进行富集分析并预测其参与的生物过程;最后通过实时荧光定量(RT-qPCR)技术对25个差异表达的lncRNA转录组数据进行验证。【结果】共鉴定获得15339个lncRNA,其中11595个lncRNA位于基因间区,包括2428个反义lncRNA、350个内含子lncRNA及966个正义lncRNA。共有1932个差异表达lncRNA(DE-lncRNA),它们所对应的8134个靶基因中,有788个为差异表达基因(DE-mRNA)。KEGG代谢通路富集分析表明,DE-mRNA主要参与植物激素信号转导(plant hormone signal transduction)和内质网中蛋白质加工过程(protein processing in endoplasmic reticulum)。共表达调控网络分析显示,表达量差异比较显著的lncRNA(MSTRG.454250.3)和其所调控的靶基因表达趋势一致,仅在野生型(GA0146)短纤维发育早期胚珠中特异表达;而lncRNA(MSTRG.454261.4)与其调控的靶基因表达趋势相反,在突变体(GA0149)中的表达量显著高于野生型。RT-qPCR结果证实了转录组数据的真实性。【结论】鉴定了26个与亚洲棉短纤维发育相关的lncRNA,其通过调控植物激素信号转导途径相关的吲哚乙酸合成酶基因(Ga03G2421)和生长素响应蛋白基因(Ga05G1344)的表达而影响短纤维的发育。 展开更多
关键词 亚洲棉 短纤维突变体 长链非编码RNA 调控网络 荧光定量PCR
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TRV病毒介导的基因沉默体系在新疆陆地棉和亚洲棉中的建立 被引量:3
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作者 刘慧 于秀立 黄先忠 《棉花学报》 CSCD 北大核心 2016年第5期485-492,共8页
为研究烟草脆裂病毒(Tobacco rattle virus,TRV)介导的基因沉默(Virus-induced gene silencing,VIGS)技术应用的广谱性,以陆地棉(Gossypium hirsutum)CLA1为标记基因,通过构建基因沉默载体,在新陆早33和亚洲棉(Gossypium arboreum)建立... 为研究烟草脆裂病毒(Tobacco rattle virus,TRV)介导的基因沉默(Virus-induced gene silencing,VIGS)技术应用的广谱性,以陆地棉(Gossypium hirsutum)CLA1为标记基因,通过构建基因沉默载体,在新陆早33和亚洲棉(Gossypium arboreum)建立了TRV-VIGS体系。半定量PCR分析表明,与对照相比,TRV侵染的新陆早33和亚洲棉中CLA1基因的表达均被有效抑制,真叶表现出明显的白化症状。同时在45份新陆中系列棉花材料中重复该体系,并且通过控制培养温度来检验温度对VIGS的影响,结果表明,当昼/夜温度分别为23℃/21℃和32℃/28℃时,不同品种的新陆中系列棉花均可以维持不同程度的白化表型。证明,TRV介导的VIGS可以用于室内研究新陆中系列棉花和亚洲棉基因功能。 展开更多
关键词 GOSSYPIUM arboreum GOSSYPIUM hirsutum 基因沉默 烟草脆裂病毒 TRV-VIGS CLA1
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一个亚洲棉MYB家族新基因的克隆及特征分析 被引量:14
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作者 杨召恩 杨作仁 +3 位作者 刘坤 刘传亮 张朝军 李付广 《中国农业科学》 CAS CSCD 北大核心 2013年第1期195-204,共10页
【目的】克隆亚洲棉MYB家族的一个新基因(GaMYB2),研究其表达模式,分析其预期编码蛋白。【方法】利用RT-PCR和RACE技术克隆亚洲棉MYB2的cDNA序列全长;应用生物信息学软件分析该基因及预期编码蛋白的特征;采用实时荧光定量PCR技术对该基... 【目的】克隆亚洲棉MYB家族的一个新基因(GaMYB2),研究其表达模式,分析其预期编码蛋白。【方法】利用RT-PCR和RACE技术克隆亚洲棉MYB2的cDNA序列全长;应用生物信息学软件分析该基因及预期编码蛋白的特征;采用实时荧光定量PCR技术对该基因的组织特异性和PEG6000模拟干旱胁迫处理下的表达模式进行分析。【结果】从亚洲棉(Gossypium arboreum L.)中克隆了MYB家族的一个新基因MYB2,该基因全长1 117 bp,ORF全长840 bp,编码279个氨基酸,含有MYB保守域,氨基酸的BALSTP分析表明GaMYB2氨基酸序列与已报道的水稻(BAA23338.1)、小麦(AAT37168.1)等的序列有40.50%到68.20%的相似性。亚细胞定位表明该基因在细胞核中表达,实时荧光定量PCR结果表明该基因在根和花中的表达量较高,并且响应17%的PEG6000模拟干旱胁迫处理,上调表达。【结论】GaMYB2是亚洲棉MYB家族的一个新基因,并认为该基因可能在棉花调控干旱胁迫的生理适应过程中发挥重要作用。 展开更多
关键词 亚洲棉 GaMYB2 干旱模拟 上调表达
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亚洲棉纤维品质和产量性状的主基因与多基因遗传分析 被引量:13
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作者 马雪霞 丁业掌 +4 位作者 蒋峰 朱协飞 郭旺珍 周保良 张天真 《植物遗传资源学报》 CAS CSCD 2008年第2期212-217,共6页
利用亚洲棉农家品种中长纤维、高强度的江陵中棉和短纤维、低强度的浙江萧山绿树构建的F2∶3家系,利用主基因与多基因混合遗传模型分析方法,对主要纤维品质和产量性状进行4世代联合分析,得到有关纤维品质和产量性状的最适遗传模型。除... 利用亚洲棉农家品种中长纤维、高强度的江陵中棉和短纤维、低强度的浙江萧山绿树构建的F2∶3家系,利用主基因与多基因混合遗传模型分析方法,对主要纤维品质和产量性状进行4世代联合分析,得到有关纤维品质和产量性状的最适遗传模型。除伸长率之外,长度、马克隆值、比强度、整齐度、短纤维指数均没有检测到主基因;产量性状中铃重和单株铃数最适遗传模型为两对加性-显性-上位性主基因+加性-显性多基因混合遗传模型(E-1),衣分的最适遗传模型为两对主基因的加性模型(B-3),子指的最适遗传模型为无主基因的加性-显性-上位性多基因模型(C),单株皮棉产量的最适遗传模型为两对加性-显性-上位性主基因+加性-显性-上位性多基因混合遗传模型(E)。利用主基因与多基因混合遗传模型分析方法对亚洲棉纤维品质和产量性状进行遗传分析,有助于阐明棉花品质和产量性状的遗传规律。 展开更多
关键词 亚洲棉 纤维品质 产量 主基因 多基因 遗传
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103份亚洲棉表型多样性分析 被引量:14
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作者 刘方 王春英 +5 位作者 王玉红 高伟 周忠丽 蔡小彦 王星星 王坤波 《植物遗传资源学报》 CAS CSCD 北大核心 2014年第3期491-497,共7页
对103份分别来源于印度、越南、贵州、广西和云南等不同地域的亚洲棉进行了表型遗传多样性分析。结果发现亚洲棉在质量性状和数量性状上均存在不同程度的遗传多样性;质量性状遗传多样性指数在主茎、叶、花、铃等不同部位表现不同;21... 对103份分别来源于印度、越南、贵州、广西和云南等不同地域的亚洲棉进行了表型遗传多样性分析。结果发现亚洲棉在质量性状和数量性状上均存在不同程度的遗传多样性;质量性状遗传多样性指数在主茎、叶、花、铃等不同部位表现不同;21个质量性状的多样性指数为0.04~1.01,平均0.57,3个数量性状的多样性指数为1.65~1.96,平均1.82,表明数量性状的遗传多样性大于质量性状。研究发现不同地域的亚洲棉遗传多样性不同,并将这103份亚洲棉聚类到8个组群。 展开更多
关键词 亚洲棉 表型性状 遗传多样性 聚类分析
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亚洲棉种质资源的SSR遗传多样性分析 被引量:8
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作者 周忠丽 杜雄明 +1 位作者 潘兆娥 何守朴 《棉花学报》 CSCD 北大核心 2013年第3期217-226,共10页
对我国棉花中期库保存的200份不同地理来源的亚洲棉代表性样本进行了SSR遗传多样性分析,结果表明:亚洲棉分子水平的遗传多样性较高。83个多态性位点共检测到368个等位基因变异,其中多态性的等位基因数为329个,平均每个SSR位点3.964个。... 对我国棉花中期库保存的200份不同地理来源的亚洲棉代表性样本进行了SSR遗传多样性分析,结果表明:亚洲棉分子水平的遗传多样性较高。83个多态性位点共检测到368个等位基因变异,其中多态性的等位基因数为329个,平均每个SSR位点3.964个。位点多态性信息量(PIC)变幅为0.010~0.882,平均0.578,PIC值大于0.7的标记有33个(占39.8%)。基因多样性(H′)变幅为0.031~2.163,有效等位基因数(Ne)变幅为1.010~8.496。华南棉区基因遗传多样性最高,其次为长江流域棉区、黄河流域棉区,从理论上支持被广泛接受的亚洲棉在我国的传播路线是由南到北,华南棉区是中棉种系的遗传多样性富集中心。利用软件NYSTS-pc2.20,采用类平均法(UPGMA)进行聚类分析,种质间SSR相似系数变幅为0.58~0.997,平均0.745,在阈值0.73处200份亚洲棉聚为8个类群,贵池小子棉白子单独聚为一群,与其他种质遗传距离较远。遗传距离和地理距离没有必然联系,但种质间亲缘关系处于极端远或极端近时,则地理距离一般也趋于较远或较近。 展开更多
关键词 亚洲棉 遗传多样性 SSR标记
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亚洲棉石系亚1号耐旱相关基因SSH文库的构建及其分析 被引量:6
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作者 张玲 李付广 +2 位作者 刘传亮 张朝军 武芝霞 《棉花学报》 CSCD 北大核心 2010年第2期110-114,共5页
通过抑制消减杂交技术成功地构建了亚洲棉石系亚1号耐旱相关基因cDNA文库。通过蓝白斑筛选、菌落PCR及生物信息学等分子生物学手段分析和检验了库的质量,最终筛选出阳性克隆392个。通过EST测序得到265个单一序列,其中41个为重叠群,224... 通过抑制消减杂交技术成功地构建了亚洲棉石系亚1号耐旱相关基因cDNA文库。通过蓝白斑筛选、菌落PCR及生物信息学等分子生物学手段分析和检验了库的质量,最终筛选出阳性克隆392个。通过EST测序得到265个单一序列,其中41个为重叠群,224个为单拷贝。生物信息学分析结果表明,该文库含有大量与耐旱相关的基因,并且涉及植物生理中多种代谢途径。 展开更多
关键词 亚洲棉 干旱胁迫 抑制性消减杂交
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棉花法呢基焦磷酸合酶cDNA克隆、序列分析及其在种子发育过程中的表达特征 被引量:26
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作者 刘长军 孟玉玲 +1 位作者 侯嵩生 陈晓亚 《Acta Botanica Sinica》 CSCD 1998年第8期703-710,共8页
根据法呢基焦磷酸合酶(FPS)保守域设计简并引物,应用NestPCR和PCR96孔板筛库技术分离到亚洲棉(GosypiumarboreumL.)法呢基焦磷酸合成酶的cDNA。序列分析表明,该cDNA全长1280bp... 根据法呢基焦磷酸合酶(FPS)保守域设计简并引物,应用NestPCR和PCR96孔板筛库技术分离到亚洲棉(GosypiumarboreumL.)法呢基焦磷酸合成酶的cDNA。序列分析表明,该cDNA全长1280bp,开放阅读框共编码342个氨基酸残基,推断蛋白质分子量约为39kD,推测的氨基酸顺序与拟南芥和青蒿的FPP合酶序列同源性为789%和807%。应用RTPCR定量分析fps1基因在“苏棉6号”(G.hirsutumL.cv.“Sumian6”)种子发育过程中的表达特征,发现从胚珠开始形成种子(开花后20d)至种子成熟(开花后40d),fps1mRNA转录水平发生明显变化。在种子发育早期,开花后20d至27dfps1基因保持相对稳定的表达水平;但从开花后27d到种子成熟,fps1mRNA的转录水平迅速增高,此期倍半萜棉毒素在种子中的积累亦呈明显的增长趋势,完全风干成熟的种子中倍半萜棉毒素的含量可达13mg/g。推测fps1基因在转录水平参与种子中倍半萜类物质合成的调控。 展开更多
关键词 CDNA 亚洲棉 苏棉6号 种子 FPS
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