The early morphological and physiological events occurring during maize (Zea mays cv. Nongda 108) seed imbibition and germination were studied. Water uptake of seeds exhibited a triphasic pattern with a marked incre...The early morphological and physiological events occurring during maize (Zea mays cv. Nongda 108) seed imbibition and germination were studied. Water uptake of seeds exhibited a triphasic pattern with a marked increase during the initial phase of imbibition, and then a slow increase, followed by a second substantial increase. Imbibition time for 10 and 50% of seed germination was about 26 and 46 h at 30℃, respectively. The relative conductivity of maize seeds dramatically decreased during the initial phase of imbibition, followed by a substantial increase. Respiratory rate of seeds gradually increased with imbibition. Length of root cap cells decreased during the initial phase and then increased; those of meristematic zone cells increased during the initial phase and then decreased; and those of elongation zone cells and of the whole elongation zone of the radicle gradually increased during germination. The contents of soluble sugars and starch in embryos gradually decreased as the activities of α- and β-amylase strikingly increased with imbibition. In the meantime, protein contents of embryos gradually decreased and free amino acid content increased. The activities of aminopeptidase and endopeptidase increased until 12 h of imbibition and then decreased. It is concluded that germination of maize seeds is mainly completed by extension of cells in the elongation zone of the radicle, and that mobilization of stored reserves in the embryo during the initial phase of imbibition is also an early event during seed germination.展开更多
Three continuous marine fish cell lines of FG (i.e., Flounder Gill) from flounder ( Paralichthys olivaceus) gill, SPH (i.e., Sea Perch Heart) from sea perch ( Lateolabrax japonicus ) heart and RSBF (i.e., Red Sea...Three continuous marine fish cell lines of FG (i.e., Flounder Gill) from flounder ( Paralichthys olivaceus) gill, SPH (i.e., Sea Perch Heart) from sea perch ( Lateolabrax japonicus ) heart and RSBF (i.e., Red Sea Bream Fin) from red sea bream ( Pagrosomus major ) fin, were characterized by lactate dehydrogenase (LDH) isozyme and morphological analysis. The LDH isozyme patterns of these three cell lines and their corresponding tissues of origin were investigated and compared. The results showed: (1) No difference was found in the LDH isozyme patterns of FG and flounder gill tissue. However, the LDH isozyme patterns of SPH and RSBF were significantly different from their corresponding tissues of origin; (2) LDH isozyme patterns of FG, SPH and RSBF were markedly different from each other and could serve as genetic markers for species identification and detection of cross contamination. Morphological change analysis of these three cell lines in comparison to their original tissues indicated that FG cells still appeared epithelioid without morphological transformation. However, morphological changes were found in SPH and RSBF compared to their original tissues. Therefore, the cellular morphology was still plastic in the relatively stable culture conditions, and it was possible that change of LDH patterns was related to morphological changes of fish cells in vitro .展开更多
To evaluate the performance of basic shape representation methods for the description of dynamic cellular morphology, several frequently-used shape descriptors are compared. The methods are examined by using 50 lympho...To evaluate the performance of basic shape representation methods for the description of dynamic cellular morphology, several frequently-used shape descriptors are compared. The methods are examined by using 50 lymphocyte video clips including two kinds of lymphocyte cells. Our goal is to represent cell shape in each frame accurately, meanwhile precisely classify the two groups of cells based on the cellular morphological variations in the video clips. Experimental results illustrate that in general the region-based shape descriptors outperform the contour-based ones, since the contourbased methods are excessively sensitive and ignorant to cellular internal information. Due to their robustness to noise, the region-based shape descriptors are suitable for dynamic cell representation. Although region-based methods are more time-consuming, they analyze the entire cell area.展开更多
Caenorhabditis elegans has been widely used as a model organism in developmental biology due to its invariant development.In this study,we developed a desktop software CShaperApp to segment fluorescence-labeled images...Caenorhabditis elegans has been widely used as a model organism in developmental biology due to its invariant development.In this study,we developed a desktop software CShaperApp to segment fluorescence-labeled images of cell membranes and analyze cellular morphologies interactively during C.elegans embryogenesis.Based on the previously proposed framework CShaper,CShaperApp empowers biologists to automatically and efficiently extract quantitative cellular morphological data with either an existing deep learning model or a fine-tuned one adapted to their in-house dataset.Experimental results show that it takes about 30 min to process a three-dimensional time-lapse(4D)dataset,which consists of 150 image stacks at a~1.5-min interval and covers C.elegans embryogenesis from the 4-cell to 350-cell stages.The robustness of CShaperApp is also validated with the datasets from different laboratories.Furthermore,modularized implementation increases the flexibility in multi-task applications and promotes its flexibility for future enhancements.As cell morphology over development has emerged as a focus of interest in developmental biology,CShaperApp is anticipated to pave the way for those studies by accelerating the high-throughput generation of systems-level quantitative data collection.The software can be freely downloaded from the website of Github(cao13jf/CShaperApp)and is executable on Windows,macOS,and Linux operating systems.展开更多
Cellular morphology and nuclear DNA content were measured with point-counting technique and flow cytometry (FCM) respectively in normal nasopharyngeal epithelium (NE), tissue adjacent to carcinoma (ATC) and nasopharyn...Cellular morphology and nuclear DNA content were measured with point-counting technique and flow cytometry (FCM) respectively in normal nasopharyngeal epithelium (NE), tissue adjacent to carcinoma (ATC) and nasopharyngeal carcinoma (NPC). The results showed that all 20 patients with NE show ed diploid, whereas 38 (38%) of 101 patients with NPC, 7 (58%) of 12 patients with recurrent NPC, 6 (30%) of 20 patients with ATC and 2 (33%) of 6 patients with NE positive to EBVCA-IgA test showed nondiploid. A total of 19 morphometric parameters of the cell were measured and calculated. The results showed that with malignant transformation of NE, most of the cellular morphometric parameters gradually increased in numerical values while no marked difference was shown between normal NE and simple hyperplasia or metaplasia in terms of cytomorphometric characteristics. Most of the parameters in dysplasia changed significantly as compared with those normal NE, simple hyperplasia or metaplasia and NPC groups. Cytomorphome展开更多
Microsporogenesis and male gametogenesis are essential for the alternating life cycle of flowering plants between diploid sporophyte and haploid gametophyte generations. Rice (Oryza sativa) is the world's major sta...Microsporogenesis and male gametogenesis are essential for the alternating life cycle of flowering plants between diploid sporophyte and haploid gametophyte generations. Rice (Oryza sativa) is the world's major staple food, and manipulation of pollen fertility is particularly important for the demands to increase rice grain yield. Towards a better understanding of the mechanisms controlling rice male reproductive development, we describe here the cytological changes of anther development through 14 stages, including cell division, differentiation and degeneration of somatic tissues consisting of four concentric cell layers surrounding and supporting reproductive cells as they form mature pollen grains through meiosis and mitosis. Furthermore, we compare the morphological difference of anthers and pollen grains in both monocot rice and eudicot Arabidopsis thaliana. Additionally, we describe the key genes identified to date critical for rice anther development and pollen formation.展开更多
基金the Knowledge Innovation Project of the Chinese Academy of Sciences(KSCX2-SW-117)Natural Science Foundation of Yunnan Province of China(2003C0068M)
文摘The early morphological and physiological events occurring during maize (Zea mays cv. Nongda 108) seed imbibition and germination were studied. Water uptake of seeds exhibited a triphasic pattern with a marked increase during the initial phase of imbibition, and then a slow increase, followed by a second substantial increase. Imbibition time for 10 and 50% of seed germination was about 26 and 46 h at 30℃, respectively. The relative conductivity of maize seeds dramatically decreased during the initial phase of imbibition, followed by a substantial increase. Respiratory rate of seeds gradually increased with imbibition. Length of root cap cells decreased during the initial phase and then increased; those of meristematic zone cells increased during the initial phase and then decreased; and those of elongation zone cells and of the whole elongation zone of the radicle gradually increased during germination. The contents of soluble sugars and starch in embryos gradually decreased as the activities of α- and β-amylase strikingly increased with imbibition. In the meantime, protein contents of embryos gradually decreased and free amino acid content increased. The activities of aminopeptidase and endopeptidase increased until 12 h of imbibition and then decreased. It is concluded that germination of maize seeds is mainly completed by extension of cells in the elongation zone of the radicle, and that mobilization of stored reserves in the embryo during the initial phase of imbibition is also an early event during seed germination.
文摘Three continuous marine fish cell lines of FG (i.e., Flounder Gill) from flounder ( Paralichthys olivaceus) gill, SPH (i.e., Sea Perch Heart) from sea perch ( Lateolabrax japonicus ) heart and RSBF (i.e., Red Sea Bream Fin) from red sea bream ( Pagrosomus major ) fin, were characterized by lactate dehydrogenase (LDH) isozyme and morphological analysis. The LDH isozyme patterns of these three cell lines and their corresponding tissues of origin were investigated and compared. The results showed: (1) No difference was found in the LDH isozyme patterns of FG and flounder gill tissue. However, the LDH isozyme patterns of SPH and RSBF were significantly different from their corresponding tissues of origin; (2) LDH isozyme patterns of FG, SPH and RSBF were markedly different from each other and could serve as genetic markers for species identification and detection of cross contamination. Morphological change analysis of these three cell lines in comparison to their original tissues indicated that FG cells still appeared epithelioid without morphological transformation. However, morphological changes were found in SPH and RSBF compared to their original tissues. Therefore, the cellular morphology was still plastic in the relatively stable culture conditions, and it was possible that change of LDH patterns was related to morphological changes of fish cells in vitro .
基金Supported by the National Natural Science Foundation of China(61271112)
文摘To evaluate the performance of basic shape representation methods for the description of dynamic cellular morphology, several frequently-used shape descriptors are compared. The methods are examined by using 50 lymphocyte video clips including two kinds of lymphocyte cells. Our goal is to represent cell shape in each frame accurately, meanwhile precisely classify the two groups of cells based on the cellular morphological variations in the video clips. Experimental results illustrate that in general the region-based shape descriptors outperform the contour-based ones, since the contourbased methods are excessively sensitive and ignorant to cellular internal information. Due to their robustness to noise, the region-based shape descriptors are suitable for dynamic cell representation. Although region-based methods are more time-consuming, they analyze the entire cell area.
基金National Natural Science Foundation of China,Grant/Award Numbers:12090053,32088101Hong Kong Innovation and Technology Fund,Grant/Award Numbers:GHP/176/21SZ,InnoHK Project CIMDAHong Kong Research Grants Council,Grant/Award Numbers:11204821,HKBU12101323,HKBU12101520,HKBU12101522,N_HKBU201/18。
文摘Caenorhabditis elegans has been widely used as a model organism in developmental biology due to its invariant development.In this study,we developed a desktop software CShaperApp to segment fluorescence-labeled images of cell membranes and analyze cellular morphologies interactively during C.elegans embryogenesis.Based on the previously proposed framework CShaper,CShaperApp empowers biologists to automatically and efficiently extract quantitative cellular morphological data with either an existing deep learning model or a fine-tuned one adapted to their in-house dataset.Experimental results show that it takes about 30 min to process a three-dimensional time-lapse(4D)dataset,which consists of 150 image stacks at a~1.5-min interval and covers C.elegans embryogenesis from the 4-cell to 350-cell stages.The robustness of CShaperApp is also validated with the datasets from different laboratories.Furthermore,modularized implementation increases the flexibility in multi-task applications and promotes its flexibility for future enhancements.As cell morphology over development has emerged as a focus of interest in developmental biology,CShaperApp is anticipated to pave the way for those studies by accelerating the high-throughput generation of systems-level quantitative data collection.The software can be freely downloaded from the website of Github(cao13jf/CShaperApp)and is executable on Windows,macOS,and Linux operating systems.
文摘Cellular morphology and nuclear DNA content were measured with point-counting technique and flow cytometry (FCM) respectively in normal nasopharyngeal epithelium (NE), tissue adjacent to carcinoma (ATC) and nasopharyngeal carcinoma (NPC). The results showed that all 20 patients with NE show ed diploid, whereas 38 (38%) of 101 patients with NPC, 7 (58%) of 12 patients with recurrent NPC, 6 (30%) of 20 patients with ATC and 2 (33%) of 6 patients with NE positive to EBVCA-IgA test showed nondiploid. A total of 19 morphometric parameters of the cell were measured and calculated. The results showed that with malignant transformation of NE, most of the cellular morphometric parameters gradually increased in numerical values while no marked difference was shown between normal NE and simple hyperplasia or metaplasia in terms of cytomorphometric characteristics. Most of the parameters in dysplasia changed significantly as compared with those normal NE, simple hyperplasia or metaplasia and NPC groups. Cytomorphome
基金supported by the funds from the National Basic Research Program of China(Nos.2009CB941500 and 2007CB108700)the National Natural Science Foundation of China(No.30725022)+1 种基金the Chinese Transgenic Project(No. 2009ZX08009-108B)the National 863 High-Tech Project (No.2011AA10A101)
文摘Microsporogenesis and male gametogenesis are essential for the alternating life cycle of flowering plants between diploid sporophyte and haploid gametophyte generations. Rice (Oryza sativa) is the world's major staple food, and manipulation of pollen fertility is particularly important for the demands to increase rice grain yield. Towards a better understanding of the mechanisms controlling rice male reproductive development, we describe here the cytological changes of anther development through 14 stages, including cell division, differentiation and degeneration of somatic tissues consisting of four concentric cell layers surrounding and supporting reproductive cells as they form mature pollen grains through meiosis and mitosis. Furthermore, we compare the morphological difference of anthers and pollen grains in both monocot rice and eudicot Arabidopsis thaliana. Additionally, we describe the key genes identified to date critical for rice anther development and pollen formation.