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CircCpsf6在N2a细胞中对细胞活力的抑制作用及其结合的蛋白功能富集分析
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作者 铁昌锐 万峻 《解剖学研究》 CAS 2021年第3期193-198,205,共7页
目的探讨CircCpsf6在N2a细胞中对细胞活力的影响,同时对CircCpsf6结合蛋白进行功能富集分析,预测CircCpsf6影响细胞活力的分子机制。方法在N2a细胞中转染CircCpsf6的siRNA或过表达质粒,对CircCpsf6进行敲减或过表达,用CCK-8法检测细胞... 目的探讨CircCpsf6在N2a细胞中对细胞活力的影响,同时对CircCpsf6结合蛋白进行功能富集分析,预测CircCpsf6影响细胞活力的分子机制。方法在N2a细胞中转染CircCpsf6的siRNA或过表达质粒,对CircCpsf6进行敲减或过表达,用CCK-8法检测细胞活力。在CircCpsf6的接口处设计特异性探针,进行下拉实验,即CircCpsf6的反义纯化实验。经过磁珠吸附,蛋白的洗脱、纯化,蛋白的质谱检测,得到CircCpsf6可能结合的蛋白。利用在线网站STRING对这些蛋白之间可能存在的相互作用进行预测,同时利用在线网站DAVID进行蛋白功能富集分析。结果在N2a细胞中,CircCpsf6能够被有效的敲减或过表达(P<0.01),敲减CircCpsf6后,细胞活力上升(P<0.01);过表达CircCpsf6后,细胞活力下降(P<0.05)。经过CircCpsf6的反义纯化实验,发现CircCpsf6可能与385个蛋白结合。GO分析和KEGG富集分析提示CircCpsf6可能通过结合蛋白影响细胞的增殖或者凋亡,从而影响细胞活力。结论CircCpsf6能够抑制N2a细胞的细胞活力。CircCpsf6可能通过结合G6pdx、Pcx、Csl影响细胞增殖,通过结合2210010C04Rik、Try10、Gm2663影响细胞凋亡。 展开更多
关键词 小鼠脑神经瘤细胞 N2a细胞 环状RNA 环状裂解和多聚腺苷酸化特异因子6 细胞活力 功能富集分析
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Deregulated expression and subcellular localization of CPSF6,a circRNA-binding protein,promote malignant development of esophageal squamous cell carcinoma 被引量:1
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作者 Shichao Guo Guangchao Wang +3 位作者 Zitong Zhao Dan Li Yongmei Song Qimin Zhan 《Chinese Journal of Cancer Research》 SCIE CAS CSCD 2022年第1期11-27,共17页
Objective:Cleavage and polyadenylation specific factor 6(CPSF6)has been documented as an oncoprotein in different types of cancer.However,functions of CPSF6 have not been investigated yet in esophageal squamous cell c... Objective:Cleavage and polyadenylation specific factor 6(CPSF6)has been documented as an oncoprotein in different types of cancer.However,functions of CPSF6 have not been investigated yet in esophageal squamous cell carcinoma(ESCC).Here,we aimed to investigate the potential clinical values and biological functions of CPSF6 in ESCC.Methods:For determining the expression level of CPSF6 in ESCC patients,we analyzed published data,performed quantitative real-time polymerase chain reaction(RT-qPCR)and immunohistochemistry assays.Kaplan-Meier curves and log-rank tests were used for survival analyses.GO and KEGG analyses were done for CPSF6-related genes.Cell proliferation,colony formation and xenograft assays were conducted to verify the effects of CPSF6 on ESCC.In addition,cell cycle and apoptosis assays were also performed to manifest the functions of CPSF6 and circCPSF6.RNA pulldown and radioimmunoprecipitation(RIP)assays were used for confirming the interaction between circCPSF6(hsa_circ_0000417)and CPSF6 protein.The regulatory relationship between CPSF6 protein and circCPSF6 was determined by RT-qPCR.Results:We found that CPSF6 was upregulated in ESCC tissues and overexpression of cytoplasmic CPSF6 was associated with poor prognosis.GO and KEGG analyses suggested that CPSF6 could mainly affect cell division in ESCC.Further experiments manifested that CPSF6 promoted cell proliferation and colony formation in vitro.Xenograft assay showed that knockdown of CPSF6 significantly decreased tumor growth rate in vivo.Subsequently,we verified that depletion of CPSF6 led to cell cycle arrest and apoptosis.Finally,we validated that CPSF6,as a circRNA-binding protein,interacted with and regulated its circular isoform circCPSF6(hsa_circ_0000417),of which depletion also resulted in cell cycle arrest and cell apoptosis in ESCC.Conclusions:These findings gave us insight that overexpression of cytoplasmic CPSF6 protein is associated with poor prognosis in ESCC and CPSF6 may function as an oncoprotein,at least in part,through regulating circCPSF6 expression. 展开更多
关键词 CPSF6 esophageal squamous cell carcinoma PROGNOSIS cell proliferation circRNA-binding protein circcpsf6
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