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High-quality reference genomes of swallowtail butterflies provide insights into their coloration evolution
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作者 Jin-Wu He Ru Zhang +20 位作者 Jie Yang Zhou Chang Li-Xin Zhu Si-Han Lu Fei-Ang Xie Jun-Lai Mao Zhi-Wei Dong Gui-Chun Liu Ping Hu Yan Dong Wen-Ting Wan Ruo-Ping Zhao Tian-Zhu Xiong Jorge LLeón-Cortés Chu-Yang Mao Wei Zhang Shuai Zhan Jun Li Lei Chen Wen Wang Xue-Yan Li 《Zoological Research》 SCIE CAS CSCD 2022年第3期367-379,共13页
Swallowtail butterflies(Papilionidae)are a historically significant butterfly group due to their colorful wing patterns,extensive morphological diversity,and phylogenetically important position as a sister group to al... Swallowtail butterflies(Papilionidae)are a historically significant butterfly group due to their colorful wing patterns,extensive morphological diversity,and phylogenetically important position as a sister group to all other butterflies and have been widely studied regarding ecological adaption,phylogeny,genetics,and evolution.Notably,they contain a unique class of pigments,i.e.,papiliochromes,which contribute to their color diversity and various biological functions such as predator avoidance and mate preference.To date,however,the genomic and genetic basis of their color diversity and papiliochrome origin in a phylogenetic and evolutionary context remain largely unknown.Here,we obtained high-quality reference genomes of 11 swallowtail butterfly species covering all tribes of Papilioninae and Parnassiinae using long-read sequencing technology.Combined with previously published butterfly genomes,we obtained robust phylogenetic relationships among tribes,overcoming the challenges of incomplete lineage sorting(ILS)and gene flow.Comprehensive genomic analyses indicated that the evolution of Papilionidae-specific conserved non-exonic elements(PSCNEs)and transcription factor binding sites(TFBSs)of patterning and transporter/cofactor genes,together with the rapid evolution of transporters/cofactors,likely promoted the origin and evolution of papiliochromes.These findings not only provide novel insights into the genomic basis of color diversity,especially papiliochrome origin in swallowtail butterflies,but also provide important data resources for exploring the evolution,ecology,and conservation of butterflies. 展开更多
关键词 High-quality reference genome Swallowtail butterfly tribe color evolution Papiliochromes
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Random Coloring Evolution on Graphs
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作者 Xin Xing CHEN Jian Gang YING 《Acta Mathematica Sinica,English Series》 SCIE CSCD 2010年第2期369-376,共8页
In this short note we study how two colors, red and blue, painted on a given graph are evolved randomly according to a transition rule which aims to simulate how people influence each other. We shall also calculate th... In this short note we study how two colors, red and blue, painted on a given graph are evolved randomly according to a transition rule which aims to simulate how people influence each other. We shall also calculate the probability that the evolution will be trapped eventually using the martingale method. 展开更多
关键词 random coloring evolution GRAPHS Markov chains MARTINGALE
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