Applications based on Wireless Sensor Networks(WSN)have shown to be quite useful in monitoring a particular geographic area of interest.Relevant geometries of the surrounding environment are essential to establish a s...Applications based on Wireless Sensor Networks(WSN)have shown to be quite useful in monitoring a particular geographic area of interest.Relevant geometries of the surrounding environment are essential to establish a successful WSN topology.But it is literally hard because constructing a localization algorithm that tracks the exact location of Sensor Nodes(SN)in a WSN is always a challenging task.In this research paper,Distance Matrix and Markov Chain(DM-MC)model is presented as node localization technique in which Distance Matrix and Estimation Matrix are used to identify the position of the node.The method further employs a Markov Chain Model(MCM)for energy optimization and interference reduction.Experiments are performed against two well-known models,and the results demonstrate that the proposed algorithm improves performance by using less network resources when compared to the existing models.Transition probability is used in the Markova chain to sustain higher energy nodes.Finally,the proposed Distance Matrix and Markov Chain model decrease energy use by 31%and 25%,respectively,compared to the existing DV-Hop and CSA methods.The experimental results were performed against two proven models,Distance VectorHop Algorithm(DV-HopA)and Crow Search Algorithm(CSA),showing that the proposed DM-MC model outperforms both the existing models regarding localization accuracy and Energy Consumption(EC).These results add to the credibility of the proposed DC-MC model as a better model for employing node localization while establishing a WSN framework.展开更多
We continue to consider one of the cybernetic methods in biology related to the study of DNA chains. Exactly, we are considering the problem of reconstructing the distance matrix for DNA chains. Such a matrix is forme...We continue to consider one of the cybernetic methods in biology related to the study of DNA chains. Exactly, we are considering the problem of reconstructing the distance matrix for DNA chains. Such a matrix is formed on the basis of any of the possible algorithms for determining the distances between DNA chains, as well as any specific object of study. At the same time, for example, the practical programming results show that on an average modern computer, it takes about a day to build such a 30 × 30 matrix for mnDNAs using the Needleman-Wunsch algorithm;therefore, for such a 300 × 300 matrix, about 3 months of continuous computer operation is expected. Thus, even for a relatively small number of species, calculating the distance matrix on conventional computers is hardly feasible and the supercomputers are usually not available. Therefore, we started publishing our variants of the algorithms for calculating the distance between two DNA chains, then we publish algorithms for restoring partially filled matrices, i.e., the inverse problem of matrix processing. Previously, we used the method of branches and boundaries, but in this paper we propose to use another new algorithm for restoring the distance matrix for DNA chains. Our recent work has shown that even greater improvement in the quality of the algorithm can often be achieved without improving the auxiliary heuristics of the branches and boundaries method. Thus, we are improving the algorithms that formulate the greedy function of this method only. .展开更多
A connected graph, whose blocks are all cliques(of possibly varying sizes),is called a block graph. Let D(G) be its distance matrix. In this note, we prove that the Smith normal form of D(G) is independent of the inte...A connected graph, whose blocks are all cliques(of possibly varying sizes),is called a block graph. Let D(G) be its distance matrix. In this note, we prove that the Smith normal form of D(G) is independent of the interconnection way of blocks and give an explicit expression for the Smith normal form in the case that all cliques have the same size, which generalize the results on determinants.展开更多
Let D(G) =(d_(ij))_(n×n) denote the distance matrix of a connected graph G with order n, where d_(ij) is equal to the distance between vertices viand vjin G. A graph is called distance integral if all eigenvalues...Let D(G) =(d_(ij))_(n×n) denote the distance matrix of a connected graph G with order n, where d_(ij) is equal to the distance between vertices viand vjin G. A graph is called distance integral if all eigenvalues of its distance matrix are integers. In 2014, Yang and Wang gave a sufficient and necessary condition for complete r-partite graphs K_(p1,p2,···,pr)=K_(a1·p1,a2·p2,···,as···ps) to be distance integral and obtained such distance integral graphs with s = 1, 2, 3, 4. However distance integral complete multipartite graphs K_(a1·p1,a2·p2,···,as·ps) with s > 4 have not been found. In this paper, we find and construct some infinite classes of these distance integral graphs K_(a1·p1,a2·p2,···,as·ps) with s = 5, 6. The problem of the existence of such distance integral graphs K_(a1·p1,a2·p2,···,as·ps) with arbitrarily large number s remains open.展开更多
We employ molecular dynamic simulation to investigate metabasin dynamics for supercooled polymer melt. We find that, in a small system, the α-relaxation process is composed of a few crossing events that the monomers ...We employ molecular dynamic simulation to investigate metabasin dynamics for supercooled polymer melt. We find that, in a small system, the α-relaxation process is composed of a few crossing events that the monomers hops from one metabasin to another. Each crossing event is very rapid and involves a democratic movement of many particles,whereas such collective motion is not string-like. Evaluation on the contributions of metabasin exploration and democratic movement shows that the structural relaxation is mostly governed by the latter. Our calculated results show that the metabasin–metabasin transitions are not the main reason of spatially dynamical heterogeneity. It is different from the binary Lennard–Jones mixture model in which the metabasin–metabasin transitions are relevant for the spatially dynamical heterogeneity.展开更多
The paper considers Voss type representation of amino acids and uses FFT on the represented binary sequences to get the spectrum in the frequency domain. Based on the analysis of this spectrum by using the method of i...The paper considers Voss type representation of amino acids and uses FFT on the represented binary sequences to get the spectrum in the frequency domain. Based on the analysis of this spectrum by using the method of inter coefficient difference (ICD), it compares protein sequences of ND5 and ND6 category. Results obtained agree with the standard ones. The purpose of the paper is to extend the ICD method of comparison of DNA sequences to comparison of protein sequences. The topic of discussion is to develop a novel method of comparing protein sequences. The main achievements of the work are that the method applied is completely new of its kind, so far as protein sequence comparison is concerned and moreover the results of comparison agree with the previous results obtained by other methods for the same category of protein sequences.展开更多
For a finite group G,the power graph P(G)is a simple connected graph whose vertex set is the set of elements of G and two distinct vertices x and y are adjacent if and only if x^(i)=y or y^(i)=x,for 2≤i,j≤n.In this ...For a finite group G,the power graph P(G)is a simple connected graph whose vertex set is the set of elements of G and two distinct vertices x and y are adjacent if and only if x^(i)=y or y^(i)=x,for 2≤i,j≤n.In this paper,we obtain the distance Laplacian spectrum of power graphs of finite groups such as cyclic groups,dihedral groups,dicyclic groups,abelian groups and elementary abelian p groups.Moreover,we find the largest and second smallest distance Laplacian eigenvalue of power graphs of such groups.展开更多
The conditional quadratic semidefinite programming(cQSDP)refers to a class of matrix optimization problems whose matrix variables are required to be positive semidefinite on a subspace,and the objectives are quadratic...The conditional quadratic semidefinite programming(cQSDP)refers to a class of matrix optimization problems whose matrix variables are required to be positive semidefinite on a subspace,and the objectives are quadratic.The chief purpose of this paper is to focus on two primal examples of cQSDP:the problem of matrix completion/approximation on a subspace and the Euclidean distance matrix problem.For the latter problem,we review some classical contributions and establish certain links among them.Moreover,we develop a semismooth Newton method for a special class of cQSDP and establish its quadratic convergence under the condition of constraint nondegeneracy.We also include an application in calibrating the correlation matrix in Libor market models.We hope this work will stimulate new research in cQSDP.展开更多
基金This project was funded by the Deanship of Scientific Research(DSR)at King Abdulaziz University,Jeddah,under Grant No.(RG-91-611-42).The authors,therefore,acknowledge with thanks to DSR technical and financial support.
文摘Applications based on Wireless Sensor Networks(WSN)have shown to be quite useful in monitoring a particular geographic area of interest.Relevant geometries of the surrounding environment are essential to establish a successful WSN topology.But it is literally hard because constructing a localization algorithm that tracks the exact location of Sensor Nodes(SN)in a WSN is always a challenging task.In this research paper,Distance Matrix and Markov Chain(DM-MC)model is presented as node localization technique in which Distance Matrix and Estimation Matrix are used to identify the position of the node.The method further employs a Markov Chain Model(MCM)for energy optimization and interference reduction.Experiments are performed against two well-known models,and the results demonstrate that the proposed algorithm improves performance by using less network resources when compared to the existing models.Transition probability is used in the Markova chain to sustain higher energy nodes.Finally,the proposed Distance Matrix and Markov Chain model decrease energy use by 31%and 25%,respectively,compared to the existing DV-Hop and CSA methods.The experimental results were performed against two proven models,Distance VectorHop Algorithm(DV-HopA)and Crow Search Algorithm(CSA),showing that the proposed DM-MC model outperforms both the existing models regarding localization accuracy and Energy Consumption(EC).These results add to the credibility of the proposed DC-MC model as a better model for employing node localization while establishing a WSN framework.
文摘We continue to consider one of the cybernetic methods in biology related to the study of DNA chains. Exactly, we are considering the problem of reconstructing the distance matrix for DNA chains. Such a matrix is formed on the basis of any of the possible algorithms for determining the distances between DNA chains, as well as any specific object of study. At the same time, for example, the practical programming results show that on an average modern computer, it takes about a day to build such a 30 × 30 matrix for mnDNAs using the Needleman-Wunsch algorithm;therefore, for such a 300 × 300 matrix, about 3 months of continuous computer operation is expected. Thus, even for a relatively small number of species, calculating the distance matrix on conventional computers is hardly feasible and the supercomputers are usually not available. Therefore, we started publishing our variants of the algorithms for calculating the distance between two DNA chains, then we publish algorithms for restoring partially filled matrices, i.e., the inverse problem of matrix processing. Previously, we used the method of branches and boundaries, but in this paper we propose to use another new algorithm for restoring the distance matrix for DNA chains. Our recent work has shown that even greater improvement in the quality of the algorithm can often be achieved without improving the auxiliary heuristics of the branches and boundaries method. Thus, we are improving the algorithms that formulate the greedy function of this method only. .
基金supported by the National Natural Science Foundation of China(Nos.11501188,11326057,11171102)by Aid program for Science and Technology Innovative Research Team in Higher Educational Institutions of Hunan Province
文摘A connected graph, whose blocks are all cliques(of possibly varying sizes),is called a block graph. Let D(G) be its distance matrix. In this note, we prove that the Smith normal form of D(G) is independent of the interconnection way of blocks and give an explicit expression for the Smith normal form in the case that all cliques have the same size, which generalize the results on determinants.
基金Supported by the National Natural Science Foundation of China(11171273) Supported by the Graduate Starting Seed Fund of Northwestern Polytechnical University(Z2014173)
文摘Let D(G) =(d_(ij))_(n×n) denote the distance matrix of a connected graph G with order n, where d_(ij) is equal to the distance between vertices viand vjin G. A graph is called distance integral if all eigenvalues of its distance matrix are integers. In 2014, Yang and Wang gave a sufficient and necessary condition for complete r-partite graphs K_(p1,p2,···,pr)=K_(a1·p1,a2·p2,···,as···ps) to be distance integral and obtained such distance integral graphs with s = 1, 2, 3, 4. However distance integral complete multipartite graphs K_(a1·p1,a2·p2,···,as·ps) with s > 4 have not been found. In this paper, we find and construct some infinite classes of these distance integral graphs K_(a1·p1,a2·p2,···,as·ps) with s = 5, 6. The problem of the existence of such distance integral graphs K_(a1·p1,a2·p2,···,as·ps) with arbitrarily large number s remains open.
基金Project supported by the National Natural Science Foundation of China(Grant No.11804085)the Doctoral Foundation of Heze University,China(Grant No.XY18BS13)
文摘We employ molecular dynamic simulation to investigate metabasin dynamics for supercooled polymer melt. We find that, in a small system, the α-relaxation process is composed of a few crossing events that the monomers hops from one metabasin to another. Each crossing event is very rapid and involves a democratic movement of many particles,whereas such collective motion is not string-like. Evaluation on the contributions of metabasin exploration and democratic movement shows that the structural relaxation is mostly governed by the latter. Our calculated results show that the metabasin–metabasin transitions are not the main reason of spatially dynamical heterogeneity. It is different from the binary Lennard–Jones mixture model in which the metabasin–metabasin transitions are relevant for the spatially dynamical heterogeneity.
文摘The paper considers Voss type representation of amino acids and uses FFT on the represented binary sequences to get the spectrum in the frequency domain. Based on the analysis of this spectrum by using the method of inter coefficient difference (ICD), it compares protein sequences of ND5 and ND6 category. Results obtained agree with the standard ones. The purpose of the paper is to extend the ICD method of comparison of DNA sequences to comparison of protein sequences. The topic of discussion is to develop a novel method of comparing protein sequences. The main achievements of the work are that the method applied is completely new of its kind, so far as protein sequence comparison is concerned and moreover the results of comparison agree with the previous results obtained by other methods for the same category of protein sequences.
基金Supported by SERB-DST,New Delhi,under the research project number MTR/2017/000084the third author is supported by NSFC (Grant Nos.11931006 and 11971011)。
文摘For a finite group G,the power graph P(G)is a simple connected graph whose vertex set is the set of elements of G and two distinct vertices x and y are adjacent if and only if x^(i)=y or y^(i)=x,for 2≤i,j≤n.In this paper,we obtain the distance Laplacian spectrum of power graphs of finite groups such as cyclic groups,dihedral groups,dicyclic groups,abelian groups and elementary abelian p groups.Moreover,we find the largest and second smallest distance Laplacian eigenvalue of power graphs of such groups.
基金supported by the Engineering and Physical Sciences Research Council Grant(No.EP/K007645/1).
文摘The conditional quadratic semidefinite programming(cQSDP)refers to a class of matrix optimization problems whose matrix variables are required to be positive semidefinite on a subspace,and the objectives are quadratic.The chief purpose of this paper is to focus on two primal examples of cQSDP:the problem of matrix completion/approximation on a subspace and the Euclidean distance matrix problem.For the latter problem,we review some classical contributions and establish certain links among them.Moreover,we develop a semismooth Newton method for a special class of cQSDP and establish its quadratic convergence under the condition of constraint nondegeneracy.We also include an application in calibrating the correlation matrix in Libor market models.We hope this work will stimulate new research in cQSDP.