Medical image segmentation plays an important role in clinical diagnosis,quantitative analysis,and treatment process.Since 2015,U-Net-based approaches have been widely used formedical image segmentation.The purpose of...Medical image segmentation plays an important role in clinical diagnosis,quantitative analysis,and treatment process.Since 2015,U-Net-based approaches have been widely used formedical image segmentation.The purpose of the U-Net expansive path is to map low-resolution encoder feature maps to full input resolution feature maps.However,the consecutive deconvolution and convolutional operations in the expansive path lead to the loss of some high-level information.More high-level information can make the segmentationmore accurate.In this paper,we propose MU-Net,a novel,multi-path upsampling convolution network to retain more high-level information.The MU-Net mainly consists of three parts:contracting path,skip connection,and multi-expansive paths.The proposed MU-Net architecture is evaluated based on three different medical imaging datasets.Our experiments show that MU-Net improves the segmentation performance of U-Net-based methods on different datasets.At the same time,the computational efficiency is significantly improved by reducing the number of parameters by more than half.展开更多
Background Owing to the limitations of the working principle of three-dimensional(3D) scanning equipment, the point clouds obtained by 3D scanning are usually sparse and unevenly distributed. Method In this paper, we ...Background Owing to the limitations of the working principle of three-dimensional(3D) scanning equipment, the point clouds obtained by 3D scanning are usually sparse and unevenly distributed. Method In this paper, we propose a new generative adversarial network(GAN) that extends PU-GAN for upsampling of point clouds. Its core architecture aims to replace the traditional self-attention(SA) module with an implicit Laplacian offset attention(OA) module and to aggregate the adjacency features using a multiscale offset attention(MSOA)module, which adaptively adjusts the receptive field to learn various structural features. Finally, residual links are added to create our residual multiscale offset attention(RMSOA) module, which utilizes multiscale structural relationships to generate finer details. Result The results of several experiments show that our method outperforms existing methods and is highly robust.展开更多
Sputum smear tests are critical for the diagnosis of respiratory diseases. Automatic segmentation of bacteria from spu-tum smear images is important for improving diagnostic efficiency. However, this remains a challen...Sputum smear tests are critical for the diagnosis of respiratory diseases. Automatic segmentation of bacteria from spu-tum smear images is important for improving diagnostic efficiency. However, this remains a challenging task owing to the high interclass similarity among different categories of bacteria and the low contrast of the bacterial edges. To explore more levels of global pattern features to promote the distinguishing ability of bacterial categories and main-tain sufficient local fine-grained features to ensure accurate localization of ambiguous bacteria simultaneously, we propose a novel dual-branch deformable cross-attention fusion network (DB-DCAFN) for accurate bacterial segmen-tation. Specifically, we first designed a dual-branch encoder consisting of multiple convolution and transformer blocks in parallel to simultaneously extract multilevel local and global features. We then designed a sparse and deformable cross-attention module to capture the semantic dependencies between local and global features, which can bridge the semantic gap and fuse features effectively. Furthermore, we designed a feature assignment fusion module to enhance meaningful features using an adaptive feature weighting strategy to obtain more accurate segmentation. We conducted extensive experiments to evaluate the effectiveness of DB-DCAFN on a clinical dataset comprising three bacterial categories: Acinetobacter baumannii, Klebsiella pneumoniae, and Pseudomonas aeruginosa. The experi-mental results demonstrate that the proposed DB-DCAFN outperforms other state-of-the-art methods and is effective at segmenting bacteria from sputum smear images.展开更多
基金The authors received Sichuan Science and Technology Program(No.18YYJC1917)funding for this study.
文摘Medical image segmentation plays an important role in clinical diagnosis,quantitative analysis,and treatment process.Since 2015,U-Net-based approaches have been widely used formedical image segmentation.The purpose of the U-Net expansive path is to map low-resolution encoder feature maps to full input resolution feature maps.However,the consecutive deconvolution and convolutional operations in the expansive path lead to the loss of some high-level information.More high-level information can make the segmentationmore accurate.In this paper,we propose MU-Net,a novel,multi-path upsampling convolution network to retain more high-level information.The MU-Net mainly consists of three parts:contracting path,skip connection,and multi-expansive paths.The proposed MU-Net architecture is evaluated based on three different medical imaging datasets.Our experiments show that MU-Net improves the segmentation performance of U-Net-based methods on different datasets.At the same time,the computational efficiency is significantly improved by reducing the number of parameters by more than half.
基金Supported by the National Natural Science Foundation of China (61901308)。
文摘Background Owing to the limitations of the working principle of three-dimensional(3D) scanning equipment, the point clouds obtained by 3D scanning are usually sparse and unevenly distributed. Method In this paper, we propose a new generative adversarial network(GAN) that extends PU-GAN for upsampling of point clouds. Its core architecture aims to replace the traditional self-attention(SA) module with an implicit Laplacian offset attention(OA) module and to aggregate the adjacency features using a multiscale offset attention(MSOA)module, which adaptively adjusts the receptive field to learn various structural features. Finally, residual links are added to create our residual multiscale offset attention(RMSOA) module, which utilizes multiscale structural relationships to generate finer details. Result The results of several experiments show that our method outperforms existing methods and is highly robust.
基金the Natural Science Foundation of Shandong Province,No.ZR2021MH213and in part by the Suzhou Science and Technology Bureau,No.SJC2021023.
文摘Sputum smear tests are critical for the diagnosis of respiratory diseases. Automatic segmentation of bacteria from spu-tum smear images is important for improving diagnostic efficiency. However, this remains a challenging task owing to the high interclass similarity among different categories of bacteria and the low contrast of the bacterial edges. To explore more levels of global pattern features to promote the distinguishing ability of bacterial categories and main-tain sufficient local fine-grained features to ensure accurate localization of ambiguous bacteria simultaneously, we propose a novel dual-branch deformable cross-attention fusion network (DB-DCAFN) for accurate bacterial segmen-tation. Specifically, we first designed a dual-branch encoder consisting of multiple convolution and transformer blocks in parallel to simultaneously extract multilevel local and global features. We then designed a sparse and deformable cross-attention module to capture the semantic dependencies between local and global features, which can bridge the semantic gap and fuse features effectively. Furthermore, we designed a feature assignment fusion module to enhance meaningful features using an adaptive feature weighting strategy to obtain more accurate segmentation. We conducted extensive experiments to evaluate the effectiveness of DB-DCAFN on a clinical dataset comprising three bacterial categories: Acinetobacter baumannii, Klebsiella pneumoniae, and Pseudomonas aeruginosa. The experi-mental results demonstrate that the proposed DB-DCAFN outperforms other state-of-the-art methods and is effective at segmenting bacteria from sputum smear images.
