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Molecular dynamics simulations of A-DNA in bivalent metal ions salt solution
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作者 Jingjing Xue Xinpeng Li +1 位作者 Rongri Tan Wenjun Zong 《Chinese Physics B》 SCIE EI CAS CSCD 2022年第4期733-741,共9页
A-form DNA is one of the biologically active double helical structure.The study of A-DNA structure has an extensive application for developing the field of DNA packaging in biotechnology.In aqueous solution,the A-DNA ... A-form DNA is one of the biologically active double helical structure.The study of A-DNA structure has an extensive application for developing the field of DNA packaging in biotechnology.In aqueous solution,the A-DNA structure will have a free transformation,the A-DNA structure will be translated into B-form structure with the evolution of time,and eventually stabilized in the B-DNA structure.To explore the stability function of the bivalent metal ions on the A-DNA structure,a series of molecular dynamics simulations have been performed on the A-DNA of sequence(CCCGGCCGGG).The results show that bivalent metal ions(Mg^(2+),Zn^(2+),Ca^(2+))generate a great effect on the structural stability of A-DNA in the environment of high concentration.As the interaction between metal ions and electronegative DNA chains,the stability of A-DNA in solution is gradually improved with the increasing solution concentration of ions.In metal salt solution with high concentration,metal ions can be easily distributed in the solvation shells around the phosphate groups and further lead to the formation of shorter and more compact DNA structure.Also,under the condition of the same concentration and valency of the metal ions,the stability of A-DNA structure is different.The calculations indicate that the structure of A-DNA in CaCl_(2)solution is less stable than in MgCl_(2)and ZnCl_(2)solution. 展开更多
关键词 transition of DNA structure bivalent metal ions molecular dynamics simulations effect of concentration
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Effect of concentration quenching on the spectroscopic properties of Er^(3+)/Yb^(3+) co-doped AlF_3-based glasses
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作者 张军杰 戴世勋 +3 位作者 徐时清 汪国年 张丽艳 胡丽丽 《Chinese Optics Letters》 SCIE EI CAS CSCD 2004年第10期600-603,共4页
A series of highly Er^(3+)/Yb^(3+) co-doped fluoroaluminate glasses have been investigated in order to develop a microchip laser at 1.54 μm under 980 nm excitation. Measurements of absorption, emission and upconversi... A series of highly Er^(3+)/Yb^(3+) co-doped fluoroaluminate glasses have been investigated in order to develop a microchip laser at 1.54 μm under 980 nm excitation. Measurements of absorption, emission and upconversion spectra have been performed to examine the effect of Er^(3+)/Yb^(3+) concentration quenching on spectroscopic properties. In the glasses with Er^(3+) concentrations below 10 mol%, concentration quenching is very low and the Er^(3+)/Yb^(3+) co-doped fluoroaluminate glasses have stronger fluorescence of 1.54μm due to the ~4I_(13/2)→~4I_(15/2) transition than that of Er^(3+) singly-doped glasses. As Er^(3+) concentrations above 10 mol% in the Er^(3+)/Yb^(3+) co-doped samples, concentration quenching of 1.54μm does obviously occur as a result of the back energy transfer from Er^(3+) to Yb^(3+). To obtain the highest emission efficiency at 1.54μm, the optimum doping-concentration ratio of Er^(3+)/Yb^(3+) was found to be approximately 1:1 in mol fraction when the Er^(3+) concentration is less than 10 mol%. 展开更多
关键词 YB co-doped AlF3-based glasses Effect of concentration quenching on the spectroscopic properties of Er
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