[ Objective] This study aimed to optimize the ISSR-PCR reaction system and select polymorphic ISSR primers for Olea euyopaea. [Method] O. euyo- paea genomic DNA was extracted from leaves as the template for optimizati...[ Objective] This study aimed to optimize the ISSR-PCR reaction system and select polymorphic ISSR primers for Olea euyopaea. [Method] O. euyo- paea genomic DNA was extracted from leaves as the template for optimization of ISSR-PCR reaction system by single-factor experiments on the main factors including Mg2＋ , dNTPs, primer concentration and template amount. [ Result ] The optimal ISSR-PCR reaction system for O. euyopaea was obtained, with a total system vol- ume of 20μl containing 1 × Taq buffer, 3.5 mmol/L Mg2＋ , 0.4 mmol/L dNTPs, 1.0 μmol/L primers, 1.0 U of Taq DNA polymerase and 20 ng of DNA tem- plate. The optimal ISSR-PCR reaction program was started with predenaturation at 94 ℃ for 5 min, followed by 40 cycles of denaturation at 94 ℃ for 30 s, annea- ling at 52 - 55 ℃ for 30 s, and extension at 72 ℃ for 2 min ; the amplification was completed by holding the reaction mixture at 72 ℃ for 10 min to allow complete extension of PCR products. PCR products were stored at 4 ℃. Based on the above conditions, 11 primers with high polymorphism, clear amplified bands and good repeatability were selected. [ Conclusion ] This study laid the foundation for further diversity research and species identification of O. euyopaea germplasm展开更多
基金Supported by Project of Important New Product Development in Yunnan Province ( 2009BB006)
文摘[ Objective] This study aimed to optimize the ISSR-PCR reaction system and select polymorphic ISSR primers for Olea euyopaea. [Method] O. euyo- paea genomic DNA was extracted from leaves as the template for optimization of ISSR-PCR reaction system by single-factor experiments on the main factors including Mg2＋ , dNTPs, primer concentration and template amount. [ Result ] The optimal ISSR-PCR reaction system for O. euyopaea was obtained, with a total system vol- ume of 20μl containing 1 × Taq buffer, 3.5 mmol/L Mg2＋ , 0.4 mmol/L dNTPs, 1.0 μmol/L primers, 1.0 U of Taq DNA polymerase and 20 ng of DNA tem- plate. The optimal ISSR-PCR reaction program was started with predenaturation at 94 ℃ for 5 min, followed by 40 cycles of denaturation at 94 ℃ for 30 s, annea- ling at 52 - 55 ℃ for 30 s, and extension at 72 ℃ for 2 min ; the amplification was completed by holding the reaction mixture at 72 ℃ for 10 min to allow complete extension of PCR products. PCR products were stored at 4 ℃. Based on the above conditions, 11 primers with high polymorphism, clear amplified bands and good repeatability were selected. [ Conclusion ] This study laid the foundation for further diversity research and species identification of O. euyopaea germplasm
