Gene expression profile changes in brain regions following traumatic brain injury at the gene level cannot sufficiently elucidate gene expression time, expression amount, protein post-translational processing or modif...Gene expression profile changes in brain regions following traumatic brain injury at the gene level cannot sufficiently elucidate gene expression time, expression amount, protein post-translational processing or modification. Therefore, it is necessary to quantitatively analyze the gene expression profile using proteomic techniques. In the present study, we established a rat model of closed brain injury using Marmarou＇s weight-drop device, and investigated hippocampal differential protein expression using two-dimensional gel electrophoresis and surface-enhanced laser desorption ionization-time of flight-mass spectrometry. A total of 364 protein peaks were detected on weak cation exchange-2 protein chips, including 37 differential protein peaks. 345 protein peaks were detected on immobilized metal affinity capture arrays-Cu, including 12 differential protein peaks Further examination of these differential proteins revealed that glucose-regulated protein and proteasome subunit alpha type 3 expression were significantly upregulated post-injury. These results indicate that brain injury can alter protein expression in the hippocampus, and that glucose-regulated protein and proteasome subunit alpha type 3 are closely associated with the occurrence and development of traumatic brain injury.展开更多
为了揭示青花菜花球表面蜡粉代谢物的成分差异,以青花菜蜡粉缺失突变体和野生型为试材,基于气相色谱-质谱(gas chromatography tandem time-of-flight mass spectrometry,GC-TOF-MS)联用技术的非靶向代谢组学,对青花菜蜡粉缺失突变体和...为了揭示青花菜花球表面蜡粉代谢物的成分差异,以青花菜蜡粉缺失突变体和野生型为试材,基于气相色谱-质谱(gas chromatography tandem time-of-flight mass spectrometry,GC-TOF-MS)联用技术的非靶向代谢组学,对青花菜蜡粉缺失突变体和野生型的花球主要代谢通路及其产物进行深入分析,并采用单变量和多元变量统计分析及数据库注释筛选差异显著的代谢物。结果表明,青花菜花蕾蜡粉中共检测出显著差异代谢物24种,包括14种氨基酸类、4种有机酸类、1种脂肪酸类、1种胺类、1种糖类和3种其他类次生代谢物;其中,下调的有18种,包括了13种氨基酸类。综合富集分析和拓扑分析获得11条重要性凸显的代谢通路,其中差异最显著的代谢通路是氨基酸的生物合成,其次是次生代谢物的生物合成;而重要性最大的是色氨酸代谢。推测青花菜蜡粉缺失可以通过调节色氨酸代谢、次生代谢物生物合成以及氨基酸生物合成等途径,调节青花菜花蕾中氨基酸类和有机酸类等次生代谢产物的物质含量,进而调控花球的生长、营养品质以及耐寒性。展开更多
基金the National Natural Science Foundation of China,No. 30471934
文摘Gene expression profile changes in brain regions following traumatic brain injury at the gene level cannot sufficiently elucidate gene expression time, expression amount, protein post-translational processing or modification. Therefore, it is necessary to quantitatively analyze the gene expression profile using proteomic techniques. In the present study, we established a rat model of closed brain injury using Marmarou＇s weight-drop device, and investigated hippocampal differential protein expression using two-dimensional gel electrophoresis and surface-enhanced laser desorption ionization-time of flight-mass spectrometry. A total of 364 protein peaks were detected on weak cation exchange-2 protein chips, including 37 differential protein peaks. 345 protein peaks were detected on immobilized metal affinity capture arrays-Cu, including 12 differential protein peaks Further examination of these differential proteins revealed that glucose-regulated protein and proteasome subunit alpha type 3 expression were significantly upregulated post-injury. These results indicate that brain injury can alter protein expression in the hippocampus, and that glucose-regulated protein and proteasome subunit alpha type 3 are closely associated with the occurrence and development of traumatic brain injury.
文摘为了揭示青花菜花球表面蜡粉代谢物的成分差异,以青花菜蜡粉缺失突变体和野生型为试材,基于气相色谱-质谱(gas chromatography tandem time-of-flight mass spectrometry,GC-TOF-MS)联用技术的非靶向代谢组学,对青花菜蜡粉缺失突变体和野生型的花球主要代谢通路及其产物进行深入分析,并采用单变量和多元变量统计分析及数据库注释筛选差异显著的代谢物。结果表明,青花菜花蕾蜡粉中共检测出显著差异代谢物24种,包括14种氨基酸类、4种有机酸类、1种脂肪酸类、1种胺类、1种糖类和3种其他类次生代谢物;其中,下调的有18种,包括了13种氨基酸类。综合富集分析和拓扑分析获得11条重要性凸显的代谢通路,其中差异最显著的代谢通路是氨基酸的生物合成,其次是次生代谢物的生物合成;而重要性最大的是色氨酸代谢。推测青花菜蜡粉缺失可以通过调节色氨酸代谢、次生代谢物生物合成以及氨基酸生物合成等途径,调节青花菜花蕾中氨基酸类和有机酸类等次生代谢产物的物质含量,进而调控花球的生长、营养品质以及耐寒性。
