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Single-cell and spatial omics:exploring hypothalamic heterogeneity
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作者 Muhammad Junaid Eun Jeong Lee Su Bin Lim 《Neural Regeneration Research》 SCIE CAS 2025年第6期1525-1540,共16页
Elucidating the complex dynamic cellular organization in the hypothalamus is critical for understanding its role in coordinating fundamental body functions. Over the past decade, single-cell and spatial omics technolo... Elucidating the complex dynamic cellular organization in the hypothalamus is critical for understanding its role in coordinating fundamental body functions. Over the past decade, single-cell and spatial omics technologies have significantly evolved, overcoming initial technical challenges in capturing and analyzing individual cells. These high-throughput omics technologies now offer a remarkable opportunity to comprehend the complex spatiotemporal patterns of transcriptional diversity and cell-type characteristics across the entire hypothalamus. Current single-cell and single-nucleus RNA sequencing methods comprehensively quantify gene expression by exploring distinct phenotypes across various subregions of the hypothalamus. However, single-cell/single-nucleus RNA sequencing requires isolating the cell/nuclei from the tissue, potentially resulting in the loss of spatial information concerning neuronal networks. Spatial transcriptomics methods, by bypassing the cell dissociation, can elucidate the intricate spatial organization of neural networks through their imaging and sequencing technologies. In this review, we highlight the applicative value of single-cell and spatial transcriptomics in exploring the complex molecular-genetic diversity of hypothalamic cell types, driven by recent high-throughput achievements. 展开更多
关键词 cellular diversity HYPOTHALAMUS multi-omics single-cell transcriptomics spatial transcriptomics
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Spatial transcriptomics combined with single-nucleus RNA sequencing reveals glial cell heterogeneity in the human spinal cord
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作者 Yali Chen Yiyong Wei +3 位作者 Jin Liu Tao Zhu Cheng Zhou Donghang Zhang 《Neural Regeneration Research》 SCIE CAS 2025年第11期3302-3316,共15页
Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocyt... Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocytes,microglia,and oligodendrocytes in the central nervous system,and satellite glial cells and Schwann cells in the peripheral nervous system.Despite the greater understanding of glial cell types and functional heterogeneity achieved through single-cell and single-nucleus RNA sequencing in animal models,few studies have investigated the transcriptomic profiles of glial cells in the human spinal cord.Here,we used high-throughput single-nucleus RNA sequencing and spatial transcriptomics to map the cellular and molecular heterogeneity of astrocytes,microglia,and oligodendrocytes in the human spinal cord.To explore the conservation and divergence across species,we compared these findings with those from mice.In the human spinal cord,astrocytes,microglia,and oligodendrocytes were each divided into six distinct transcriptomic subclusters.In the mouse spinal cord,astrocytes,microglia,and oligodendrocytes were divided into five,four,and five distinct transcriptomic subclusters,respectively.The comparative results revealed substantial heterogeneity in all glial cell types between humans and mice.Additionally,we detected sex differences in gene expression in human spinal cord glial cells.Specifically,in all astrocyte subtypes,the levels of NEAT1 and CHI3L1 were higher in males than in females,whereas the levels of CST3 were lower in males than in females.In all microglial subtypes,all differentially expressed genes were located on the sex chromosomes.In addition to sex-specific gene differences,the levels of MT-ND4,MT2A,MT-ATP6,MT-CO3,MT-ND2,MT-ND3,and MT-CO_(2) in all spinal cord oligodendrocyte subtypes were higher in females than in males.Collectively,the present dataset extensively characterizes glial cell heterogeneity and offers a valuable resource for exploring the cellular basis of spinal cordrelated illnesses,including chronic pain,amyotrophic lateral sclerosis,and multiple sclerosis. 展开更多
关键词 astrocyte glial cell HUMAN microglia oligodendrocyte sex differentiation single-nucleus RNA sequencing spatial transcriptomics species variation spinal cord
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Types and Spatial Distribution of Geo-tourism Resources in Jilin Province of China 被引量:1
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作者 许振北 孟涛 +3 位作者 邢立新 孙浩 毕记省 王东 《Journal of Landscape Research》 2012年第2期58-62,共5页
Natural geological conditions and geo-tourism resources in Jilin Province were introduced,and distribution features of the local major tourist resources(vegetation-covered eastern region,grass swamp on western plain) ... Natural geological conditions and geo-tourism resources in Jilin Province were introduced,and distribution features of the local major tourist resources(vegetation-covered eastern region,grass swamp on western plain) were studied.Jingyu Volcanic Mineral Spring Geo-park,Changbai Mountain Geo-park and Qian'an Mud Forest Geo-park were studied as typical geo-tourism resources,so as to provide basic data for the systematic development and construction of geo-tourism resources in Jilin Province. 展开更多
关键词 geo-tourism RESOURCES GEOLOGICAL RELICS Classification spatial distribution Jilin PROVINCE
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Measuring urban sprawl in Beijing with geo-spatial indices 被引量:13
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作者 JIANG Fang LIU Shenghe +1 位作者 YUAN Hong ZHANG Qing 《Journal of Geographical Sciences》 SCIE CSCD 2007年第4期469-478,共10页
Concerning about the rapid urban growth in recent China, this study takes Beijing as a case and puts forward that urban sprawl can be measured from spatial configuration, urban growth efficiency and external impacts, ... Concerning about the rapid urban growth in recent China, this study takes Beijing as a case and puts forward that urban sprawl can be measured from spatial configuration, urban growth efficiency and external impacts, and then develops a geo-spatial indices system for measuring sprawl, a total of 13 indicators. In order to calculate these indices, different sources data are selected, including land use maps, former land use planning, land price and floor-area-ratio samples, digitized map of the highways and city centers, population and GDP statistical data, etc. Various GIS spatial analysis methods are used to spatialize these indices into 100mx100m cells. Besides, an integrated urban sprawl index is calculated by weight sum of these 13 indices. The application result indicates that geo-spatial indices system can capture most of the typical features and interior differentia of urban sprawl. Construction land in Beijing has kept fast growing with large amount, low efficiency and disordered spatial configuration, indicating a typical sprawling tendency. The following specific sprawl features are identified by each indicator: (1) typical spatial configuration of sprawling: obvious fragmentation and irregularity of landscape due to unsuccessful enforcement of land use planning, unadvisable pattern of typical discontinuous development, strip development and leapfrog development; (2) low efficiency of sprawl: low development density, low population density and economic output in newly developed area; and (3) negative impacts on agriculture, environment and city life. According to the integrated sprawl index, the sprawling amount in the northern part is larger than that in the southern, but the sprawling extent is in converse case; most sprawling area include the marginal area of the near suburbs and the area between highways, etc. Four sprawling patterns are identified: randomly expansion at urban fringe, strip development along or between highways, scattered development of industrial land, leapfrog development of urban residence and industrial area. 展开更多
关键词 urban sprawl MEASUREMENT geo-spatial indices BEIJING
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Spatial Humanities and Geo-computation for Social Sciences:Advances and Applications 被引量:3
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作者 Kun QIN Hui LIN +2 位作者 Yang YUE Feng ZHANG Jianya GONG 《Journal of Geodesy and Geoinformation Science》 2022年第2期1-6,共6页
Humanities and Social Sciences(HSS) are undergoing the transformation of spatialization and quantification. Geo-computation, with geoinformatics(including RS: Remote Sensing;GIS: Geographical Information System;GNSS: ... Humanities and Social Sciences(HSS) are undergoing the transformation of spatialization and quantification. Geo-computation, with geoinformatics(including RS: Remote Sensing;GIS: Geographical Information System;GNSS: Global Navigation Satellite System), provides effective computational and spatialization methods and tools for HSS. Spatial Humanities and Geo-computation for Social Sciences(SH&GSS) is a field coupling geo-computation, and geoinformatics, with HSS. This special issue accepted a set of contributions highlighting recent advances in methodologies and applications of SH&GSS, which are related to sentiment spatial analysis from social media data, emotional change spatial analysis from news data, spatial analysis of social media related to COVID-19, crime spatiotemporal analysis, “double evaluation” for Land Use/Land Cover(LUCC), Specially Protected Natural Areas(SPNA) analysis, editing behavior analysis of Volunteered Geographic Information(VGI), electricity consumption anomaly detection, First and Last Mile Problem(FLMP) of public transport, and spatial interaction network analysis for crude oil trade network. Based on these related researches, we aim to present an overview of SH&GSS, and propose some future research directions for SH&HSS. 展开更多
关键词 Humanities and Social Sciences(HSS) spatial Humanities and geo-computation for Social Sciences(SH&GSS) sentiment spatial analysis spatial analysis for social media crime spatiotemporal analysis editing behavior analysis spatial interaction network analysis
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Implications for Cultural Landscape in a Chinese Context: Geo-analysis of Spatial Distribution of Historic Sites 被引量:5
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作者 WANG Fang MAO Wen +1 位作者 DONG Ying ZHU Xiaohua 《Chinese Geographical Science》 SCIE CSCD 2018年第1期167-182,共16页
The protection of historic sites, especially their relationship with urban development, has become a worldwide issue, both in developed and developing countries. In the context of rapid urbanization in China, the real... The protection of historic sites, especially their relationship with urban development, has become a worldwide issue, both in developed and developing countries. In the context of rapid urbanization in China, the realistic compatibility between urban construction and the protection of historic sites is always a key research topic. In this study, first, to comprehend their spatial distribution patterns, 828 historic sites throughout the country are selected based on certain criteria. Then, we conduct quantitative research using GIS software, adopting indicators that include Nearest Neighbor Index, Gini Coefficient, and Geographic Concentration Index to analyze the spatial characteristics of historic sites on the three levels of city, province and nation. The results indicate that the spatial distribution of the different types of historic sites is an agglomeration on the nationwide scale, most of which is located in the regions of the Pearl(Zhujiang) River Delta, Yangtze(Changjiang) River Delta and Beijing-Tianjin Region. Because the majority of historic sites are located within approximately 10 km of the downtown area, a certain pattern has emerged, showing that the larger cities own more historic areas, which are in a more incomplete state of preservation, indicating the fragmentation of heritage spaces. The formation mechanism of the historic sites' distribution pattern is based on the conditions of the cities/towns as well as the bid-rent theory. 展开更多
关键词 historic site cultural landscape spatial distribution geo-analysis ancient city/town past heritage block recent industrialheritage district
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Concepts and Applications of Spatial Database for Geo-Archives Catalog
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作者 Xiaoguang Li~1,Chao Xing~2,Lei Li~1,Xiaoxi Zhou~1 1.Geo-Information and Archives Center,Tianjin Institute of Geological & Mineral Resources,Tianjin 300170,China. 2.ESRI China(Beijing) Learning Center,Beijing 100101,China 《地学前缘》 EI CAS CSCD 北大核心 2009年第S1期289-289,共1页
The searching method of spatial information on traditional geo-archives catalog database(TGCD) is based on the text,and the result of retrieval can be only from the text of fields of relational database.The informatio... The searching method of spatial information on traditional geo-archives catalog database(TGCD) is based on the text,and the result of retrieval can be only from the text of fields of relational database.The information queried must be input into the relational database as a text form in advance,otherwise,the visitors would not get any result from it.So。 展开更多
关键词 SEARCHING method geo-archives CATALOG GIS spatial DATABASE
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A New Method Based on Association Rules Mining and Geo-filter for Mining Spatial Association Knowledge 被引量:6
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作者 LIU Yaolin XIE Peng +3 位作者 HE Qingsong ZHAO Xiang WEI Xiaojian TAN Ronghui 《Chinese Geographical Science》 SCIE CSCD 2017年第3期389-401,共13页
Association rule mining methods, as a set of important data mining tools, could be used for mining spatial association rules of spatial data. However, applications of these methods are limited for mining results conta... Association rule mining methods, as a set of important data mining tools, could be used for mining spatial association rules of spatial data. However, applications of these methods are limited for mining results containing large number of redundant rules. In this paper, a new method named Geo-Filtered Association Rules Mining(GFARM) is proposed to effectively eliminate the redundant rules. An application of GFARM is performed as a case study in which association rules are discovered between building land distribution and potential driving factors in Wuhan, China from 1995 to 2015. Ten sets of regular sampling grids with different sizes are used for detecting the influence of multi-scales on GFARM. Results show that the proposed method can filter 50%–70% of redundant rules. GFARM is also successful in discovering spatial association pattern between building land distribution and driving factors. 展开更多
关键词 data mining association rules rules spatial visualization driving factors analysis land use change
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Overcoming Object Misalignment in Geo-Spatial Datasets
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作者 Ismail Wadembere Patrick Ogao 《Journal of Geographic Information System》 2014年第4期307-316,共10页
In integrating geo-spatial datasets, sometimes layers are unable to perfectly overlay each other. In most cases, the cause of misalignment is the cartographic variation of objects forming features in the datasets. Eit... In integrating geo-spatial datasets, sometimes layers are unable to perfectly overlay each other. In most cases, the cause of misalignment is the cartographic variation of objects forming features in the datasets. Either this could be due to actual changes on ground, collection, or storage approaches used leading to overlapping or openings between features. In this paper, we present an alignment method that uses adjustment algorithms to update the geometry of features within a dataset or complementary adjacent datasets so that they can align to achieve perfect integration. The method identifies every unique spatial instance in datasets and their spatial points that define all their geometry;the differences are compared and used to compute the alignment parameters. This provides a uniform geo-spatial features’ alignment taking into consideration changes in the different datasets being integrated without affecting the topology and attributes. 展开更多
关键词 Object-Based GEOMETRY ALIGNMENT geo-spatial Management
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Coastline Security Engineering Using Geo-Spatial Approach: Case of Chabahar Port, Iran
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作者 Sharareh Pourebrahim Mehrdad Hadipour Mazlin Bin Mokhtar 《Journal of Geographic Information System》 2014年第3期236-245,共10页
Regarding the special potential of ports located on international coastlines such as Makoran Sea (Iran) for goods and human smuggling, national level of coastline security is very important. They can play a significan... Regarding the special potential of ports located on international coastlines such as Makoran Sea (Iran) for goods and human smuggling, national level of coastline security is very important. They can play a significant role in the development of power and security. Based on military reviews and analyses, police location and monitoring field view in the coastlines are strategic issues in modern security development. This research proposes a tool for development of coastal roads and coastal walking routes in the deployment of police. The main focuses are monitoring field view and accessibility to the strategic coastline. GIS tool plays an essential role in producing important security maps. Chabahar Port in Iran, as the most important port of Makoran Sea, has been selected as the study area, regarding its strategic role in the national economy and security. Research method focused on these major axes: successful establishment of police stations in shoreline for increasing monitoring and coastal security and suitable patrol of patrol police car in the coastal roads. This study adopts a scientific approach to the analysis of the present and future development in urban and security planning in coastal towns in the national and regional levels. 展开更多
关键词 SECURITY COASTLINE geo-spatial APPROACH
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Spatial analysis of the osteoarthritis microenvironment: techniques, insights, and applications 被引量:1
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作者 Xiwei Fan Antonia Rujia Sun +5 位作者 Reuben S.E.Young Isaac O.Afara Brett R.Hamilton Louis Jun Ye Ong Ross Crawford Indira Prasadam 《Bone Research》 SCIE CAS CSCD 2024年第1期1-19,共19页
Osteoarthritis(OA)is a debilitating degenerative disease affecting multiple joint tissues,including cartilage,bone,synovium,and adipose tissues.OA presents diverse clinical phenotypes and distinct molecular endotypes,... Osteoarthritis(OA)is a debilitating degenerative disease affecting multiple joint tissues,including cartilage,bone,synovium,and adipose tissues.OA presents diverse clinical phenotypes and distinct molecular endotypes,including inflammatory,metabolic,mechanical,genetic,and synovial variants.Consequently,innovative technologies are needed to support the development of effective diagnostic and precision therapeutic approaches.Traditional analysis of bulk OA tissue extracts has limitations due to technical constraints,causing challenges in the differentiation between various physiological and pathological phenotypes in joint tissues.This issue has led to standardization difficulties and hindered the success of clinical trials.Gaining insights into the spatial variations of the cellular and molecular structures in OA tissues,encompassing DNA,RNA,metabolites,and proteins,as well as their chemical properties,elemental composition,and mechanical attributes,can contribute to a more comprehensive understanding of the disease subtypes.Spatially resolved biology enables biologists to investigate cells within the context of their tissue microenvironment,providing a more holistic view of cellular function.Recent advances in innovative spatial biology techniques now allow intact tissue sections to be examined using various-omics lenses,such as genomics,transcriptomics,proteomics,and metabolomics,with spatial data.This fusion of approaches provides researchers with critical insights into the molecular composition and functions of the cells and tissues at precise spatial coordinates.Furthermore,advanced imaging techniques,including high-resolution microscopy,hyperspectral imaging,and mass spectrometry imaging,enable the visualization and analysis of the spatial distribution of biomolecules,cells,and tissues.Linking these molecular imaging outputs to conventional tissue histology can facilitate a more comprehensive characterization of disease phenotypes.This review summarizes the recent advancements in the molecular imaging modalities and methodologies for in-depth spatial analysis.It explores their applications,challenges,and potential opportunities in the field of OA.Additionally,this review provides a perspective on the potential research directions for these contemporary approaches that can meet the requirements of clinical diagnoses and the establishment of therapeutic targets for OA. 展开更多
关键词 INSIGHT spatial enable
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Spatial distribution of shallow landslides caused by Typhoon Lekima in 2019 in Zhejiang Province, China 被引量:1
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作者 CUI Yulong YANG Liu +1 位作者 XU Chong ZHENG Jun 《Journal of Mountain Science》 SCIE CSCD 2024年第5期1564-1580,共17页
In recent years, the coastal region of Southeast China has witnessed a significant increase in the frequency and intensity of extreme rainfall events associated with landfalling typhoons. The hilly and mountainous ter... In recent years, the coastal region of Southeast China has witnessed a significant increase in the frequency and intensity of extreme rainfall events associated with landfalling typhoons. The hilly and mountainous terrain of this area, combined with rapid rainfall accumulation, has led to a surge in flash floods and severe geological hazards. On August 10, 2019, Typhoon Lekima made landfall in Zhejiang Province, China, and its torrential rainfall triggered extensive landslides, resulting in substantial damage and economic losses. Utilizing high-resolution satellite images, we compiled a landslide inventory of the affected area, which comprises a total of 2,774 rainfallinduced landslides over an area of 2965 km2. The majority of these landslides were small to mediumsized and exhibited elongated, clustered patterns. Some landslides displayed characteristics of high-level initiation, obstructing or partially blocking rivers, leading to the formation of debris dams. We used the inventory to analyze the distribution pattern of the landslides and their relationship with topographical, geological, and hydrological factors. The results showed that landslide abundance was closely related to elevation, slope angle, faults, and road density. The landslides were predominantly located in hilly and low mountainous areas, with elevations ranging from 150 to 300 m, slopes of 20 to 30 degrees, and a NE-SE aspect. Notably, we observed the highest Landslide Number Density(LND) and Landslide Area Percentage(LAP) in the rhyolite region. Landslides were concentrated within approximately 4 km on either side of fault zones, with their size and frequency negatively correlated with distances to faults, roads, and river systems. Furthermore, under the influence of typhoons, regions with denser vegetation cover exhibited higher landslide density, reaching maximum values in shrubland areas. In areas experiencing significantly increased concentrated rainfall, landslide density also showed a corresponding rise. In terms of spatial distribution, the rainfall-triggered landslides primarily occurred in the northeastern part of the study area, particularly in regions characterized by complex topography such as Shanzao Village in Yantan Town, Xixia Township, and Shangzhang Township. The research findings offer crucial data on the rainfallinduced landslides triggered by Typhoon Lekima, shedding light on their spatial distribution patterns. These findings provide valuable references for mitigating risks and planning reconstruction in typhoon-affected area. 展开更多
关键词 Typhoon rainfall Landslide characteristics spatial distribution Southeast coastal region
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FPGA-based position reconstruction method for neutron beam flux spatial distribution measurement in BNCT 被引量:1
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作者 Wei Jiang Ping Cao +5 位作者 Yi-Ming Wu Xian-Ke Liu Zhu-Jun Fang Zhi-Yong Zhang Bin Shi Jun Chen 《Nuclear Science and Techniques》 SCIE EI CAS CSCD 2024年第3期96-108,共13页
A new measurement method for the spatial distribution of neutron beam flux in boron neutron capture therapy(BNCT)is being developed based on the two-dimensional Micromegas detector.To address the issue of long process... A new measurement method for the spatial distribution of neutron beam flux in boron neutron capture therapy(BNCT)is being developed based on the two-dimensional Micromegas detector.To address the issue of long processing times in traditional offline position reconstruction methods,this paper proposes a field programmable gate array based online position reconstruction method utilizing the micro-time projection chamber principle.This method encapsulates key technical aspects:a self-adaptive serial link technique built upon the dynamical adjustment of the delay chain length,fast sorting,a coordinate-matching technique based on the mapping between signal timestamps and random access memory(RAM)addresses,and a precise start point-merging technique utilizing a circular combined RAM.The performance test of the selfadaptive serial link shows that the bit error rate of the link is better than 10-12 at a confidence level of 99%,ensuring reliable data transmission.The experiment utilizing the readout electronics and Micromegas detector shows a spatial resolution of approximately 1.4 mm,surpassing the current method’s resolution level of 5 mm.The beam experiment confirms that the readout electronics system can obtain the flux spatial distribution of neutron beams online,thus validating the feasibility of the position reconstruction method.The online position reconstruction method avoids traditional methods,such as bubble sorting and traversal searching,simplifies the design of the logic firmware,and reduces the time complexity from O(n2)to O(n).This study contributes to the advancement in measuring neutron beam flux for BNCT. 展开更多
关键词 Position reconstruction FPGA Readout electronics Neutron flux spatial distribution
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Characterization and spatial analysis of coseismic landslides triggered by the Luding Ms 6.8 earthquake in the Xianshuihe fault zone, Southwest China 被引量:1
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作者 GUO Changbao LI Caihong +10 位作者 YANG Zhihua NI Jiawei ZHONG Ning WANG Meng YAN Yiqiu SONG Deguang ZHANG Yanan ZHANG Xianbing WU Ruian CAO Shichao SHAO Weiwei 《Journal of Mountain Science》 SCIE CSCD 2024年第1期160-181,共22页
On September 5, 2022, a magnitude Ms 6.8 earthquake occurred along the Moxi fault in the southern part of the Xianshuihe fault zone located in the southeastern margin of the Tibetan Plateau,resulting in severe damage ... On September 5, 2022, a magnitude Ms 6.8 earthquake occurred along the Moxi fault in the southern part of the Xianshuihe fault zone located in the southeastern margin of the Tibetan Plateau,resulting in severe damage and substantial economic loss. In this study, we established a coseismic landslide database triggered by Luding Ms 6.8 earthquake, which includes 4794 landslides with a total area of 46.79 km^(2). The coseismic landslides primarily consisted of medium and small-sized landslides, characterized by shallow surface sliding. Some exhibited characteristics of high-position initiation resulted in the obstruction or partial obstruction of rivers, leading to the formation of dammed lakes. Our research found that the coseismic landslides were predominantly observed on slopes ranging from 30° to 50°, occurring at between 1000 m and 2500 m, with slope aspects varying from 90° to 180°. Landslides were also highly developed in granitic bodies that had experienced structural fracturing and strong-tomoderate weathering. Coseismic landslides concentrated within a 6 km range on both sides of the Xianshuihe and Daduhe fault zones. The area and number of coseismic landslides exhibited a negative correlation with the distance to fault lines, road networks, and river systems, as they were influenced by fault activity, road excavation, and river erosion. The coseismic landslides were mainly distributed in the southeastern region of the epicenter, exhibiting relatively concentrated patterns within the IX-degree zones such as Moxi Town, Wandong River basin, Detuo Town to Wanggangping Township. Our research findings provide important data on the coseismic landslides triggered by the Luding Ms 6.8 earthquake and reveal the spatial distribution patterns of these landslides. These findings can serve as important references for risk mitigation, reconstruction planning, and regional earthquake disaster research in the earthquake-affected area. 展开更多
关键词 Luding earthquake Coseismic landslides Remote sensing interpretation spatial distribution Xianshuihe fault Earthquake fault
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Estimation-free spatial-domain image reconstruction of structured illumination microscopy 被引量:1
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作者 Xiaoyan Li Shijie Tu +4 位作者 Yile Sun Yubing Han Xiang Hao Cuifang kuang Xu Liu 《Journal of Innovative Optical Health Sciences》 SCIE EI CSCD 2024年第2期45-58,共14页
Structured illumination microscopy(SIM)achieves super-resolution(SR)by modulating the high-frequency information of the sample into the passband of the optical system and subsequent image reconstruction.The traditiona... Structured illumination microscopy(SIM)achieves super-resolution(SR)by modulating the high-frequency information of the sample into the passband of the optical system and subsequent image reconstruction.The traditional Wiener-filtering-based reconstruction algorithm operates in the Fourier domain,it requires prior knowledge of the sinusoidal illumination patterns which makes the time-consuming procedure of parameter estimation to raw datasets necessary,besides,the parameter estimation is sensitive to noise or aberration-induced pattern distortion which leads to reconstruction artifacts.Here,we propose a spatial-domain image reconstruction method that does not require parameter estimation but calculates patterns from raw datasets,and a reconstructed image can be obtained just by calculating the spatial covariance of differential calculated patterns and differential filtered datasets(the notch filtering operation is performed to the raw datasets for attenuating and compensating the optical transfer function(OTF)).Experiments on reconstructing raw datasets including nonbiological,biological,and simulated samples demonstrate that our method has SR capability,high reconstruction speed,and high robustness to aberration and noise. 展开更多
关键词 Structured illumination microscopy image reconstruction spatial domain digital micromirror device(DMD)
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Design of Protograph LDPC-Coded MIMO-VLC Systems with Generalized Spatial Modulation 被引量:1
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作者 Dai Lin Fang Yi +1 位作者 Guan Yongliang Mohsen Guizani 《China Communications》 SCIE CSCD 2024年第3期118-136,共19页
This paper investigates the bit-interleaved coded generalized spatial modulation(BICGSM) with iterative decoding(BICGSM-ID) for multiple-input multiple-output(MIMO) visible light communications(VLC). In the BICGSM-ID ... This paper investigates the bit-interleaved coded generalized spatial modulation(BICGSM) with iterative decoding(BICGSM-ID) for multiple-input multiple-output(MIMO) visible light communications(VLC). In the BICGSM-ID scheme, the information bits conveyed by the signal-domain(SiD) symbols and the spatial-domain(SpD) light emitting diode(LED)-index patterns are coded by a protograph low-density parity-check(P-LDPC) code. Specifically, we propose a signal-domain symbol expanding and re-allocating(SSER) method for constructing a type of novel generalized spatial modulation(GSM) constellations, referred to as SSERGSM constellations, so as to boost the performance of the BICGSM-ID MIMO-VLC systems.Moreover, by applying a modified PEXIT(MPEXIT) algorithm, we further design a family of rate-compatible P-LDPC codes, referred to as enhanced accumulate-repeat-accumulate(EARA) codes,which possess both excellent decoding thresholds and linear-minimum-distance-growth property. Both analysis and simulation results illustrate that the proposed SSERGSM constellations and P-LDPC codes can remarkably improve the convergence and decoding performance of MIMO-VLC systems. Therefore, the proposed P-LDPC-coded SSERGSM-mapped BICGSMID configuration is envisioned as a promising transmission solution to satisfy the high-throughput requirement of MIMO-VLC applications. 展开更多
关键词 bit-interleaved coded modulation generalized spatial modulation multiple-input multipleoutput protograph LDPC codes visible light communication
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Spatial Variation in CO_(2) Concentration Improves the Simulated Surface Air Temperature Increase in the Northern Hemisphere 被引量:1
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作者 Jing PENG Li DAN Xiba TANG 《Advances in Atmospheric Sciences》 SCIE CAS CSCD 2024年第8期1614-1628,1676-1685,共25页
The increasing concentration of atmospheric CO_(2) since the Industrial Revolution has affected surface air temperature.However,the impact of the spatial distribution of atmospheric CO_(2) concentration on surface air... The increasing concentration of atmospheric CO_(2) since the Industrial Revolution has affected surface air temperature.However,the impact of the spatial distribution of atmospheric CO_(2) concentration on surface air temperature biases remains highly unclear.By incorporating the spatial distribution of satellite-derived atmospheric CO_(2) concentration in the Beijing Normal University Earth System Model,this study investigated the increase in surface air temperature since the Industrial Revolution in the Northern Hemisphere(NH) under historical conditions from 1976-2005.In comparison with the increase in surface temperature simulated using a uniform distribution of CO_(2),simulation with a nonuniform distribution of CO_(2)produced better agreement with the Climatic Research Unit(CRU) data in the NH under the historical condition relative to the baseline over the period 1901-30.Hemispheric June-July-August(JJA) surface air temperature increased by 1.28℃ ±0.29℃ in simulations with a uniform distribution of CO_(2),by 1.00℃±0.24℃ in simulations with a non-uniform distribution of CO_(2),and by 0.24℃ in the CRU data.The decrease in downward shortwave radiation in the non-uniform CO_(2) simulation was primarily attributable to reduced warming in Eurasia,combined with feedbacks resulting from increased leaf area index(LAI) and latent heat fluxes.These effects were more pronounced in the non-uniform CO_(2)simulation compared to the uniform CO_(2) simulation.Results indicate that consideration of the spatial distribution of CO_(2)concentration can reduce the overestimated increase in surface air temperature simulated by Earth system models. 展开更多
关键词 spatial variations of CO_(2) surface air temperature Earth system model land surface albedo leaf area index
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Ultrafast dynamics of femtosecond laser-induced high spatial frequency periodic structures on silicon surfaces 被引量:2
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作者 Ruozhong Han Yuchan Zhang +6 位作者 Qilin Jiang Long Chen Kaiqiang Cao Shian Zhang Donghai Feng Zhenrong Sun Tianqing Jia 《Opto-Electronic Science》 2024年第3期33-46,共14页
Femtosecond laser-induced periodic surface structures(LIPSS)have been extensively studied over the past few decades.In particular,the period and groove width of high-spatial-frequency LIPSS(HSFL)is much smaller than t... Femtosecond laser-induced periodic surface structures(LIPSS)have been extensively studied over the past few decades.In particular,the period and groove width of high-spatial-frequency LIPSS(HSFL)is much smaller than the diffraction limit,making it a useful method for efficient nanomanufacturing.However,compared with the low-spatial-frequency LIPSS(LSFL),the structure size of the HSFL is smaller,and it is more easily submerged.Therefore,the formation mechanism of HSFL is complex and has always been a research hotspot in this field.In this study,regular LSFL with a period of 760 nm was fabricated in advance on a silicon surface with two-beam interference using an 800 nm,50 fs femtosecond laser.The ultrafast dynamics of HSFL formation on the silicon surface of prefabricated LSFL under single femtosecond laser pulse irradiation were observed and analyzed for the first time using collinear pump-probe imaging method.In general,the evolution of the surface structure undergoes five sequential stages:the LSFL begins to split,becomes uniform HSFL,degenerates into an irregular LSFL,undergoes secondary splitting into a weakly uniform HSFL,and evolves into an irregular LSFL or is submerged.The results indicate that the local enhancement of the submerged nanocavity,or the nanoplasma,in the prefabricated LSFL ridge led to the splitting of the LSFL,and the thermodynamic effect drove the homogenization of the splitting LSFL,which evolved into HSFL. 展开更多
关键词 laser-induced periodic surface structures(LIPSS) local field enhancement collinear pump-probe imaging silicon high spatial frequency periodic structures
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Evaluation of COVID-19 Cases and Vaccinations in the State of Georgia, United States: A Spatial Perspective
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作者 Oluwaseun Ibukun Olawale Oluwafemi +3 位作者 Oluwaseun Babatunde Fahmina Binte Ibrahim Yahaya Danjuma Samson Lamela Mela 《Journal of Geographic Information System》 2024年第3期167-182,共16页
This study evaluates the distribution of COVID-19 cases and mass vaccination campaigns from January 2020 to April 2023. There are over 235,000 COVID-19 cases and over 733,000 vaccinations across the 159 counties in th... This study evaluates the distribution of COVID-19 cases and mass vaccination campaigns from January 2020 to April 2023. There are over 235,000 COVID-19 cases and over 733,000 vaccinations across the 159 counties in the state of Georgia. Data on COVID-19 was acquired from usafact.org while the vaccination records were obtained from COVID-19 vaccination tracker. The spatial patterns across the counties were analyzed using spatial statistical techniques which include both global and local spatial autocorrelation. The study further evaluates the effect of vaccination and selected socio-economic predictors on COVID-19 cases across the study area. The result of hotspot analysis reveals that the epicenters of COVID-19 are distributed across Cobb, Fulton, Gwinnett, and DeKalb counties. It was also affirmed that the vaccination records followed the same pattern as COVID-19 cases’ epicenters. The result of the spatial error model performed well and accounted for a considerable percentage of the regression with an adjusted R squared of 0.68, Akaike Information Criterion (AIC) 387.682 and Breusch-Pagan of 9.8091. ESDA was employed to select the main explanatory variables. The selected variables include vaccination, population density, percentage of people that do not have health insurance, black race, Hispanic and these variables accounted for 68% of the number of COVID-19 cases in the state of Georgia during the study period. The study concludes that both COVID-19 cases and vaccinated individuals have spatial peculiarities across counties in Georgia state. Lastly, socio-economic variables and vaccination are very important to reduce the vulnerability of individuals to COVID-19 disease. 展开更多
关键词 COVID-19 VACCINATION spatial Autocorrelation Georgia spatial Pattern spatial Regression
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Spatial evolution and spatial production of traditional villages from "backward poverty villages" to "ecologically well-off villages": Experiences from the hinterland of national nature reserves in China
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作者 Zhang Yiyi LI Yangbing 《Journal of Mountain Science》 SCIE CSCD 2024年第4期1100-1118,共19页
With the rapid urbanization process,the space of traditional villages in China is undergoing significant changes.Studying the spatial evolution of traditional villages is significant in promoting rural spatial transfo... With the rapid urbanization process,the space of traditional villages in China is undergoing significant changes.Studying the spatial evolution of traditional villages is significant in promoting rural spatial transformation and realizing rural revitalization and sustainable rural development.Based on the traceability analysis of spatial production theory,this paper constructed an analytical framework for the spatial production evolution of traditional villages,analyzed the spatial evolution process and characteristics of traditional villages by using buffer analysis,spatial syntax,and other research methods,and revealed the characteristics of the spatial production evolution of traditional villages and the driving mechanism.The results show that:(1)The village spatial formation and development follow the village life cycle theory and usually develop from embryonic villages to diversified and integrated villages;(2)The evolution of village spatial production is characterized by the diversity of material space,the sublimation of daily life space,and the integration of social system space and generalization of emotional space;(3)The evolution of village spatial production from backward and poor village to ecologically well-off village is influenced by a combination of factors;(4)The village has formed a spatial structure of"people-land-scape-culture-industry",realized comprehensive reconstruction and spatial reproduction.The study results reflect the spatial evolution characteristics of traditional villages in mountainous areas in a more comprehensive way,which helps to promote the protection and development of traditional villages in mountainous areas and,to a certain extent,provides a reference for the development of rural revitalization. 展开更多
关键词 Traditional villages spatial production spatial evolution spatial reconstruction
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