The integration QTL map for gray leaf spot resistance in maize was constructed by compiling a total of 57 QTLs available with genetic map IBM2 2005 neighbors as reference. Twenty-six "real QTLs" and seven consensus ...The integration QTL map for gray leaf spot resistance in maize was constructed by compiling a total of 57 QTLs available with genetic map IBM2 2005 neighbors as reference. Twenty-six "real QTLs" and seven consensus QTLs were identified by refining these 57 QTLs using overview and meta-analysis approaches. Seven consensus QTLs were found on chromosomes 1.06, 2.06, 3.04, 4.06, 4.08, 5.03, and 8.06, and the map coordinates were 552.53,425.72, 279.20, 368.97, 583.21, 308.68 and 446.14 cM, respectively. Using a synteny conservation approach based on comparative mapping between the maize genetic map and rice physical map, a total of 69 rice and maize resistance genes collected from websites Gramene and MaizeGDB were projected onto the maize genetic map IBM2 2005 neighbors, and 2 (Rgene32, htl), 4 (RgeneS, rp3, scmv2, wsm2), and 4 (ht2, Rgene6, Rgene8 and Rgene7) positional candidate genes were found in three consensus QTLs on chromosomes 2.06, 3.04, and 8.06, respectively. The results suggested that the combination of meta-analysis of gray leaf spot in maize and sequence homologous comparison between maize and rice could be an efficient strategy for identifying major QTLs and corresponding candidate genes for the gray leaf spot.展开更多
The gray leaf spot caused by Cercospora zeina has become a serious disease in maize in China.The isolates of C.zeina from Yunnan,Sichuan,Guizhou,Hubei,Chongqing,Gansu,and Shaanxi were collected.From those,127 samples ...The gray leaf spot caused by Cercospora zeina has become a serious disease in maize in China.The isolates of C.zeina from Yunnan,Sichuan,Guizhou,Hubei,Chongqing,Gansu,and Shaanxi were collected.From those,127 samples were used for genetic diversity analysis based on inter-simple sequence repeat(ISSR)and 108 samples were used for multi-gene sequence analysis based on five gene fragments.The results indicated that populations of C.zeina were differentiated with a relatively high genetic level and were classified into two major groups and seven subgroups.The intra-population genetic differentiation of C.zeina is the leading cause of population variation in China,and interpopulation genetic similarity is closely related to the colonization time and spread direction.The multi-gene sequence analysis of C.zeina isolates demonstrated that there were nine haplotypes.Genetic diversity and multi-gene sequence revealed that Yunnan population of C.zeina,the earliest colonizing in China,had the highest genetic and haplotype diversity and had experienced an expansion event.With the influence of the southwest monsoon in the Indian Ocean,C.zeina from Yunnan gradually moved to Sichuan,Guizhou,Shaanxi,Gansu,and Chongqing.Meanwhile,C.zeina was transferred directly from the Yunnan into the Hubei Province via seed and then came into Shaanxi,Henan,and Chongqing along with the wind from Hubei.展开更多
Maize gray leaf spot is a kind of leaf disease seriously threatened the production of maize,which occurs all around the world.The occurrence and damage conditions of maize gray leaf spot at home and abroad and in Yunn...Maize gray leaf spot is a kind of leaf disease seriously threatened the production of maize,which occurs all around the world.The occurrence and damage conditions of maize gray leaf spot at home and abroad and in Yunnan Province are described,the latest research process of maize gray leaf spot are summarized,and the integrated control methods of maize gray leaf spot and its GPS monitoring are further introduced.展开更多
The GDSL esterase/lipase family contains many functional genes that perform important biological functions in growth and development, morphogenesis, seed oil synthesis, and defense responses in plants. The expression ...The GDSL esterase/lipase family contains many functional genes that perform important biological functions in growth and development, morphogenesis, seed oil synthesis, and defense responses in plants. The expression of GDSL esterase/lipase genes can respond to biotic and abiotic stresses. Although GDSL esterase/lipase family genes have been identified and studied in other plants, they have not been identified and their functions remain unclear in tomato. This study is the first to identify 80 GDSL esterase/lipase family genes in tomato, which were named SlGELP1–80. These genes were mapped to their positions on the chromosomes and their physical and chemical properties, gene structure, phylogenetic relationships, collinear relationships, and cis-acting elements were analyzed. The spatiotemporal expression characteristics of the Sl GELP genes in tomato were diverse. In addition, RNA-seq analysis indicated that the expression patterns of the SlGELP genes in tomato differed before and after inoculation with Stemphylium lycopersici. qRT-PCR was used to analyze the expression of five Sl GELP genes after treatments with S. lycopersici, salicylic acid and jasmonic acid. Finally, this study was the first to identify and analyze GDSL esterase/lipase family genes in tomato via bioinformatics approaches, and these findings provide new insights for improving the study of plant disease resistance.展开更多
文摘The integration QTL map for gray leaf spot resistance in maize was constructed by compiling a total of 57 QTLs available with genetic map IBM2 2005 neighbors as reference. Twenty-six "real QTLs" and seven consensus QTLs were identified by refining these 57 QTLs using overview and meta-analysis approaches. Seven consensus QTLs were found on chromosomes 1.06, 2.06, 3.04, 4.06, 4.08, 5.03, and 8.06, and the map coordinates were 552.53,425.72, 279.20, 368.97, 583.21, 308.68 and 446.14 cM, respectively. Using a synteny conservation approach based on comparative mapping between the maize genetic map and rice physical map, a total of 69 rice and maize resistance genes collected from websites Gramene and MaizeGDB were projected onto the maize genetic map IBM2 2005 neighbors, and 2 (Rgene32, htl), 4 (RgeneS, rp3, scmv2, wsm2), and 4 (ht2, Rgene6, Rgene8 and Rgene7) positional candidate genes were found in three consensus QTLs on chromosomes 2.06, 3.04, and 8.06, respectively. The results suggested that the combination of meta-analysis of gray leaf spot in maize and sequence homologous comparison between maize and rice could be an efficient strategy for identifying major QTLs and corresponding candidate genes for the gray leaf spot.
基金supported by the China Agriculture Research System from MOAR and MOF(CARS-02)the Agricultural Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences(CAAS-ASTIP-2017-ICS)。
文摘The gray leaf spot caused by Cercospora zeina has become a serious disease in maize in China.The isolates of C.zeina from Yunnan,Sichuan,Guizhou,Hubei,Chongqing,Gansu,and Shaanxi were collected.From those,127 samples were used for genetic diversity analysis based on inter-simple sequence repeat(ISSR)and 108 samples were used for multi-gene sequence analysis based on five gene fragments.The results indicated that populations of C.zeina were differentiated with a relatively high genetic level and were classified into two major groups and seven subgroups.The intra-population genetic differentiation of C.zeina is the leading cause of population variation in China,and interpopulation genetic similarity is closely related to the colonization time and spread direction.The multi-gene sequence analysis of C.zeina isolates demonstrated that there were nine haplotypes.Genetic diversity and multi-gene sequence revealed that Yunnan population of C.zeina,the earliest colonizing in China,had the highest genetic and haplotype diversity and had experienced an expansion event.With the influence of the southwest monsoon in the Indian Ocean,C.zeina from Yunnan gradually moved to Sichuan,Guizhou,Shaanxi,Gansu,and Chongqing.Meanwhile,C.zeina was transferred directly from the Yunnan into the Hubei Province via seed and then came into Shaanxi,Henan,and Chongqing along with the wind from Hubei.
基金Supported by Agriculture Science and Technology Achievement Fund Projects in Ministry of Science(2008GB2F300302)~~
文摘Maize gray leaf spot is a kind of leaf disease seriously threatened the production of maize,which occurs all around the world.The occurrence and damage conditions of maize gray leaf spot at home and abroad and in Yunnan Province are described,the latest research process of maize gray leaf spot are summarized,and the integrated control methods of maize gray leaf spot and its GPS monitoring are further introduced.
基金supported by the“Bai Qian Wan”Project of Heilongjiang Province,China(2019ZX16B02)the National Natural Science Foundation of China(32002059)+1 种基金the Heilongjiang Natural Science Foundation of China(LH2020C10)the Fellowship of China Postdoctoral Science Foundation(2020M681068)。
文摘The GDSL esterase/lipase family contains many functional genes that perform important biological functions in growth and development, morphogenesis, seed oil synthesis, and defense responses in plants. The expression of GDSL esterase/lipase genes can respond to biotic and abiotic stresses. Although GDSL esterase/lipase family genes have been identified and studied in other plants, they have not been identified and their functions remain unclear in tomato. This study is the first to identify 80 GDSL esterase/lipase family genes in tomato, which were named SlGELP1–80. These genes were mapped to their positions on the chromosomes and their physical and chemical properties, gene structure, phylogenetic relationships, collinear relationships, and cis-acting elements were analyzed. The spatiotemporal expression characteristics of the Sl GELP genes in tomato were diverse. In addition, RNA-seq analysis indicated that the expression patterns of the SlGELP genes in tomato differed before and after inoculation with Stemphylium lycopersici. qRT-PCR was used to analyze the expression of five Sl GELP genes after treatments with S. lycopersici, salicylic acid and jasmonic acid. Finally, this study was the first to identify and analyze GDSL esterase/lipase family genes in tomato via bioinformatics approaches, and these findings provide new insights for improving the study of plant disease resistance.