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miR-106b-25/miR-17-92 clusters: Polycistrons with oncogenic roles in hepatocellular carcinoma 被引量:17
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作者 Weiqi Tan Yang Li +1 位作者 Seng-Gee Lim Theresa MC Tan 《World Journal of Gastroenterology》 SCIE CAS 2014年第20期5962-5972,共11页
MicroRNAs are small endogenously expressed RNA molecules which are involved in the process of silencing gene expression through translational regulation.The polycistronic miR-17-92 cluster is the first microRNA cluste... MicroRNAs are small endogenously expressed RNA molecules which are involved in the process of silencing gene expression through translational regulation.The polycistronic miR-17-92 cluster is the first microRNA cluster shown to play a role in tumorigenesis.It has two other paralogs in the human genome,the miR-106b-25 cluster and the miR-106a-363 cluster.Collectively,the microRNAs encoded by these clusters can be further grouped based on the seed sequences into four families,namely the miR-17,the miR-92,the miR-18and the miR-19 families.Over-expression of the miR-106b-25 and miR-17-92 clusters has been reported not only during the development of cirrhosis but also subsequently during the development of hepatocellular carcinoma.Members of these clusters have also been shown to affect the replication of hepatitis B and hepatitis C viruses.Various targets of these microRNAs have been identified,and these targets are involved in tumor growth,cell survival and metastasis.In this review,we first describe the regulation of these clusters by c-Myc and E2F1,and how the members of these clusters inturn regulate E2F1 expression forming an auto-regulatory loop.In addition,the roles of the various members of the clusters in affecting relevant target gene expression in the pathogenesis of hepatocellular carcinoma will also be discussed. 展开更多
关键词 miR-106b-25 cluster miR-17-92 cluster Hepatocellul
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Hsa-miR-106b-25簇的靶基因预测及生物信息学分析
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作者 宋亚芹 付文博 +2 位作者 卢沐 刘洋 魏育涛 《医学研究生学报》 CAS 北大核心 2015年第10期1023-1027,共5页
目的 Hsa-miR-106b-25簇涉及肿瘤的多种生物学过程,文中对hsa-miR-106b-25簇:miR-106b、miR-93、miR-25进行靶基因的预测及功能分析,为进一步研究这3个miRNAs的功能及他们之间的相互作用调节机制提供线索。方法应用miRBase数据库获取miR... 目的 Hsa-miR-106b-25簇涉及肿瘤的多种生物学过程,文中对hsa-miR-106b-25簇:miR-106b、miR-93、miR-25进行靶基因的预测及功能分析,为进一步研究这3个miRNAs的功能及他们之间的相互作用调节机制提供线索。方法应用miRBase数据库获取miR-106b、miR-93及miR-25的序列信息,选择Target Scan、Pic Tar、miRanda 3种在线靶基因预测软件分别预测它们的靶基因,取交集并结合miRTarbase数据库中3种及3种以上实验验证过的靶基因作为进一步生物信息学分析的基因集合;分别对基因集合进行生物过程的功能富集分析,pathway分析及蛋白互作分析。结果 hsa-miR-106b-25簇的预测靶基因富集于多个生物学过程及功能,其生物过程主要集中于:大分子新陈代谢调节、代谢过程的调节、细胞周期;KEGG通路主要富集于:胶质瘤、黑色素瘤、前列腺癌、胆囊癌等肿瘤相关通路,蛋白互作显示基因簇中3个成员miRNA的预测靶基因编码蛋白质间存在复杂的相互作用,靶基因KAT2B、PTEN、TP53、CDH1、MDM2、E2F1、RB1、SMAD7编码蛋白在互作网络中具有核心地位。结论 miR-106b-25簇中的3个成员通过调控细胞周期的转换作用于肿瘤通路过程进而调节下游靶蛋白参与肿瘤的发生过程。 展开更多
关键词 hsa-mir-106b-25 miR-106b miR-93 miR-25 肿瘤 生物信息学分析
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