The occurrence,inheritance,and segregation of complex genomic structural variation in synthetic Brassica napus

"Synthetic"allopolyploids recreated by interspecific hybridization play an important role in providing novel genomic variation for crop improvement.Such synthetic allopolyploids often undergo rapid genomic structural variation(SV).However,how such SV arises,is inherited and fixed,and how it affects important traits,has rarely been comprehensively and quantitively studied in advanced generation synthetic lines.A better understanding of these processes will aid breeders in knowing how to best utilize synthetic allopolyploids in breeding programs.Here,we analyzed three genetic mapping populations(735 DH lines)derived from crosses between advanced synthetic and conventional Brassica napus(rapeseed)lines,using whole-genome sequencing to determine genome composition.We observed high tolerance of large structural variants,particularly toward the telomeres,and preferential selection for balanced homoeologous exchanges(duplication/deletion events between the A and C genomes resulting in retention of gene/chromosome dosage between homoeologous chromosome pairs),including stable events involving whole chromosomes("pseudoeuploidy").Given the experimental design(all three populations shared a common parent),we were able to observe that parental SV was regularly inherited,showed genetic hitchhiking effects on segregation,and was one of the major factors inducing adjacent novel and larger SV.Surprisingly,novel SV occurred at low frequencies with no significant impacts on observed fertility and yield-related traits in the advanced generation synthetic lines.However,incorporating genome-wide SV in linkage mapping explained significantly more genetic variance for traits.Our results provide a framework for detecting and understanding the occurrence and inheritance of genomic SV in breeding programs,and support the use of synthetic parents as an important source of novel trait variation.

Classical Cosmology I. Anomalous Redshift for Galaxies in NED-D

Three mechanisms for an alternative to the Doppler effect as an explanation for the redshift are reviewed. A fourth mechanism is the attenuation of the light as given by the Beer-Lambert law. The average value of the Hubble constant is therefore derived by processing the galaxies of the NED-D catalog in which the distances are independent of the redshift. The observed anisotropy of the Hubble constant is reproduced by adopting a rim model, a chord model, and both 2D and 3D Voronoi diagrams.

Time Domain Simulation of Transient Responses of Very Large Floating Structures Under Unsteady External Loads

A time domain finite element method （FEM） for the analysis of transient elastic response of a very large floating structure （VLFS） subjected to arbitrary time-dependent external loads is presented. This method is developed directly in time domain and the hydrodynamic problem is formulated based on linear, inviscid and slightly compressible fluid theory and the structural response is analyzed on the thin plate assumption. The time domain finite element procedure herein is validated by comparing numerical results with available experimental data. Finally, the transient elastic response of a pontoon-type VLFS under the landing of an airplane is computed by the proposed time domain FEM. The time histories of the applied force and the position and velocity of an airplane during landing are modeled with data from a Boeing 747-400 jumbo jet.

The Working Mechanism and An Analytic Method of the Deep Embedded Large Cylinder Structure

The large cylinder is a new-type structure that has been applied to harbor and offshore engineering. An analytic method of the relationship between loads and the structure displacement is developed based on the failure mode of deep embedded large cylinder structures. It can be used to calculate directly the soil resistance and the ultimate bearing capacity of the structure under usage. A new criterion of the large cylinder structure, which discriminates the deep embedded cylinder from the shallow embedded cylinder, is defined. Model tests prove that the proposed method is feasible for the analysis of deep embedded large cylinder structures.

Hydroelastic Analysis of Very Large Floating Structures Using Plate Green Functions

Great attention has been paid to the development of very large floating structures. Owing to their extreme large size and great flexibility, the coupling between the structural deformation and fluid motion is significant. This is a typical problem of hydroelasticity. Efficient and accurate estimation of the hydroelastic response of very large floating structures in waves is very important for design. In this paper, the plate Green function and fluid Green function are combined to analyze the hydroelastic response of very large floating structures. The plate Green function here is a new one proposed by the authors and it satisfies all boundary conditions for free-free rectangular plates on elastic foundations. The results are compared with some experimental data. It is shown that the method proposed in this paper is efficient and accurate. Finally, various factors affecting the hydroelastic response of very large floating structures are also studied.

AN EXPERIMENTAL STUDY OF THE LARGE SCALE COHERENT STRUCTURES IN A FORCED FREE SHEAR LAYER

The dynamic characteristics of the large scale coherent structures in a forced free shear layer are experi- mentally studied by means of flow visualization. The quantitative measurements are acquired by the use of a LDV. It is shown that the development of the coherent structures can be greatly influenced by upstream artificial perturbations and as a result the mixing in the layer can be controlled. Like vortex merging, vortex splitting is also a common evolu- tion pattern in the development of the coherent structures.

SVD Approach for Actuator and Sensor Placement in Active Vibration Control of Large Cable Net Structures

The actuator and sensor placement problem for active vibration control of large cable net structures is investigated in this paper.Since the structures exhibit closely spaced modes in the range of low frequencies,the number of modes to be considered is quite large after modal truncation,while only a limited number of actuators and sensors are to be placed.This makes it hard to determine the actuator and sensor locations with the existing placement methods in the literature such as the methods based on the controllability/observability grammian.To deal with this issue,an actuator and sensor placement method based on singular value decompositions(SVD)of the input and output matrices is proposed,which guarantees the modal controllability and observability of the system.The effectiveness of the SVD based method is verified through numerical simulations in which comparisons are conducted between randomly-chosen locations and the optimal ones obtained by a genetic algorithm.

North slope transition zone of Songnan-Baodao sag in Qiongdongnan Basin and its control on medium and large gas fields,South China Sea

Based on analysis of newly collected 3D seismic and drilled well data,the geological structure and fault system of Baodao sag have been systematically examined to figure out characteristics of the transition fault terrace belt and its control on the formation of natural gas reservoirs.The research results show that the Baodao sag has the northern fault terrace belt,central depression belt and southern slope belt developed,among them,the northern fault terrace belt consists of multiple transition fault terrace belts such as Baodao B,A and C from west to east which control the source rocks,traps,reservoirs,oil and gas migration and hydrocarbon enrichment in the Baodao sag.The activity of the main fault of the transition belt in the sedimentary period of Yacheng Formation in the Early Oligocene controlled the hydrocarbon generation kitchen and hydrocarbon generation potential.From west to east,getting closer to the provenance,the transition belt increased in activity strength,thickness of source rock and scale of delta,and had multiple hydrocarbon generation depressions developed.The main fault had local compression under the background of tension and torsion,giving rise to composite traps under the background of large nose structure,and the Baodao A and Baodao C traps to the east are larger than Baodao B trap.Multiple fault terraces controlled the material source input from the uplift area to form large delta sand bodies,and the synthetic transition belt of the west and middle sections and the gentle slope of the east section of the F12 fault in the Baodao A transition belt controlled the input of two major material sources,giving rise to a number of delta lobes in the west and east branches.The large structural ridge formed under the control of the main fault close to the hydrocarbon generation center allows efficient migration and accumulation of oil and gas.The combination mode and active time of the main faults matched well with the natural gas charging period,resulting in the hydrocarbon gas enrichment.Baodao A transition belt is adjacent to Baodao 27,25 and 21 lows,where large braided river delta deposits supplied by Shenhu uplift provenance develop,and it is characterized by large structural ridges allowing high efficient hydrocarbon accumulation,parallel combination of main faults and early cessation of faulting activity,so it is a favorable area for hydrocarbon gas accumulation.Thick high-quality gas reservoirs have been revealed through drilling,leading to the discovery of the first large-scale gas field in Baodo 21-1 of Baodao sag.This discovery also confirms that the north transition zone of Songnan-Baodao sag has good reservoir forming conditions,and the transition fault terrace belt has great exploration potential eastward.

ON THE EVOLUTION OF LARGE SCALE STRUCTURES IN THREE-DIMENSIONAL MIXING LAYERS

In this paper, several mathematical models for the large scale structures in some special kinds of mixing layers, which might be practically useful for enhancing the mixing, are proposed. First, the linear growth rate of the large scale structures in the mixing layers was calculated. Then, using the much improved weakly non-linear theory, combined with the energy method, the non-linear evolution of large scale structures in two special mixing layer configurations is calculated. One of the mixing lavers has equal magnitudes of the upstream velocity vectors, while the angles between the velocity vectors and the trailing edge were pi /2 - phi and pi /2 + phi, respectively. The other mixing layer was generated by a splitter-plate with a 45-degree-sweep trailing edge.

Reliability-Based Optimal Design for Very Large Floating Structure

Costs and losses induced by possible future extreme environmental conditions and difficulties in repairing post yielding damage strongly suggest the need for proper consideration in design rather than just life loss prevention. This can be addressed through the development of design methodology that balances the initial cost of the very large floating structure (VLFS) against the expected potential losses resulting from future extreme wave induced structural damage. Here, the development of a methodology for determining optimal, cost effective design will be presented and applied to a VLFS located in the Tokyo bay. Optimal design criteria are determined based on the total expected life cycle cost and acceptable damage probability and curvature of the structure, and a set of sizes of the structure are obtained. The methodology and applications require expressions of the initial cost and the expected life cycle damage cost as functions of the optimal design variables. This study includes the methodology, total life cycle cost function, structural damage modeling, and reliability analysis.

Seismic response reduction analysis of large chassis base-isolated structure under long-period ground motions

Long-period structures(e.g.Isolated structures)tend to produce pseudo-resonance with low frequency compo-nents of long-period ground motions,resulting in the increase in damage.Stiffness mutation occurs due to the set-back in the upper body of the large chassis structure.In the parts with stiffness mutation,the torsion effect caused by the tower is far greater than that of the chassis itself.In this study,a total of 273 ground motions are collected and then filtered into four types,including the near-field ordinary,near-field pulse,far-field ordinary,and far-field harmonic.An 8-degree(0.2 g)fortified large chassis base-isolated structure is established.Furthermore,ETABS program software is used to conduct nonlinear time history analysis on the isolation and seismic model under bi-directional earthquake ground motions.The comparison results show that the seismic isolation effect of the base-isolated structure under long-period ground motions is worse than that associated with ordinary ground motions when the seismic response reduction rate of the large base floor significantly decreases compared with that of the tower.When the inter-story displacement angle and the displacement of isolation layer of the chassis exceeds the limit of Code for Seismic Design of Buildings(GB 50011-2010),it is recommended to adopt composite seismic isolation technology or add limit devices.Under the condition of long-period ground motions,the base-isolated structure reduces the lateral-torsional coupling effect of the large chassis structure,while the torsion response of large chassis’top layer increases.Under long-period ground motions with the same acceleration peak,the response of the base-isolated structure increases much more than that of the seismic structure and the consideration of this impact is suggested to be added to the Code.

Stability Criteria for Large－Scale Linear Systems with Structured Uncertainties

The robust stability analysis for large scale linear systems with structured time varying uncertainties is investigated in this paper.By using the scalar Lyapunov functions and the properties of M matrix and nonnegative matrix,stability robustness measures are proposed.The robust stability criteria obtained are applied to derive an algebric criterion which is expressed directly in terms of plant parameters and is shown to be less conservative than the existing ones.A numerical example is given to demonstrate the stability criteria obtained and to compare them with the previous ones.

超大浮体与OWC集成系统的水动力性能:半解析研究

Responses of the very large floating Structures(VLFS)can be mitigated by implementing oscillating water columns(OWCs).This paper explores the fundamental mechanism of present wave interactions with both structures and examines the hydrodynamic performance of VLFS equipped with OWCs(VLFS-OWCs).Under the linear potential flow theory framework,the semi-analytical model of wave interaction with VLFS-OWCs is developed using the eigenfunction matching method.The semi-analytical model is verified using the Haskind relationship and wave energy conservation law.Results show that the system with dual-chamber OWCs has a wider frequency bandwidth in wave power extraction and hydroelastic response mitigation of VLFS.It is worth noting that the presence of Bragg resonance can be trigged due to wave interaction with the chamber walls and the VLFS,which is not beneficial for the wave power extraction performance and the protection of VLFS.

Influence of Gaps Between Multiple Floating Bodies on Wave Forces

The present study aims to give general hints about hydrodynamic interactions for water wave diffraction on a super large floating structure composed of a large number of box-shaped modules with many small gaps in between. And meanwhile, it also aims to seek for an effective way to take the gap influence into consideration without numerical difficulties existing in conventional methods. An asymptotic matching technique is exploited by virtue of the smallness of gaps. Formal potential solutions are established for the near field around the gap ends and the far field away from gap ends, respectively, and the unknowns in those solutions are uniquely determined by asymptotic matching. The eigen-function expansion method is used for the outer far field and a series of pulsating sources at each gap end is introduced to simulate the gap influence. Strong hydrodynamic interaction is observed and a new resonant phenomenon, the mechanism of which differs absolutely from any known ones, is revealed in the present study. Sharp peak responses for both vertical and horizontal wave-exciting forces on each block are found around some special resonance frequencies, which depend on the draft of the structure and the gap width. The present results are of practical significance to the design of links (connectors) of modules for super large floating structures. And the importance is also closely related to the hydro-elasticity analysis for super large floating structures, in which local loads may be as important as the integrated loads.

On the Interaction of Surface Waves with An Elastic Plate of Finite Length in Head Seas

An eigen-function expansion method based on a new orthogonal inner product is proposed by Sahoo et al. (2000) for the study of the hydroelastic response of mat-type VLFS in head seas. However, their main emphasis is on the effect of edge conditions and they assume that the plate is of a semi-infinite length. In reality, the plate is of finite length. For consideration of the finite length effect, the reflection and transmission from the other end must be considered. The effect of this reflection and transmission on the hydroelastic response of VLFS is of interest for practical application. Furthermore, the physical meaning of the new inner product was not given in their paper. In this paper, it is shown that the new inner product can he derived from the governing equation and the bottom boundary conditions. Then the same eigen-function expansion method is adopted for the study of the hydroelastic response of an elastic plate of finite length in surface waves. Detailed comparisons are made between the present finite length model and the semi-infinite model and between the present model predictions and the experimental results. It is found that that the finite length effect is significant and the accuracy of present model is higher than the semi-infinite model. Furthermore, a new phenomenon, which is not mentioned in Sahoo et al. (2000), is found. Taht is, for larger L/h ratios, the reflection and transmission coefficients will oscillate with the non-dimensional parameter k(0) h. Further study is needed for full understanding of this phenomenon.

Comparison of Linear Level I Green-Naghdi Theory with Linear Wave Theory for Prediction of Hydroelastic Responses of VLFS

Very Large Floating Structures (VLFS) have drawn considerable attention recently due to their potential significance in the exploitation of ocean resources and in the utilization of ocean space. Efficient and accurate estimation of their hydroelastic responses to waves is very important for the design. Recently, an efficient numerical algorithm was developed by Ertekin and Kim (1999). However, in their analysis, the linear Level I Green-Naghdi (GN) theory is employed to describe fluid dynamics instead of the conventional linear wave (LW) theory of finite water depth. They claimed that this linear level I GN theory provided better predictions of the hydroelastic responses of VLFS than the linear wave theory. In this paper, a detailed derivation is given in the conventional linear wave theory framework with the same quantity as used in the linear level I GN theory framework. This allows a critical comparison between the linear wave theory and the linear level I GN theory. It is found that the linear level I GN theory can be regarded as an approximation to the linear wave theory of finite water depth. The consequences of the differences between these two theories in the predicted hydroelastic responses are studied quantitatively. And it is found that the linear level I GN theory is not superior to the linear wave theory. Finally, various factors affecting the hydroelastic response of VLFS are studied with the implemented algorithm.

A method to Estimate Dynamic Responses of VLFS Based on Multi-Floating-Module Model Connected by Elastic Hinges

Based on the elastic foundation beam theory and the multi-floating-module hydrodynamic theory,a novel method is proposed to estimate the dynamic responses of VLFS(Very Large Floating Structure).In still water,a VLFS can be simplified as an elastic foundation beam model or a multi-floating-module model connected by elastic hinges.According to equivalent displacement of the two models in static analysis,the problem of rotation stiffness of elastic hinges can be solved.Then,based on the potential flow theory,the dynamic responding analysis of multi-floatingmodule model under wave loads can be computed in ANSYS-AQWA software.By assembling the time domain analysis results of each module,the dynamic responses of the VLFS can be obtained.Validation of the method is conducted through a series of comparison calculations,which mainly includes a continuous structure and a three-part structure connected by hinges in regular waves.The results of this paper method show a satisfactory agreement with the experiment and calculation data given in relative references.

An Improved Simplified Method for Predicting the Hydroelastic Response of Mat-Like VLFS

Very Large Floating Structures (VLFS) have received considerable attention recently. Efficient and accurate estimation of their hydroelastic responses in waves is very important for the design. The most efficient approach would obviously be the analytical one, Within the category of analytical approaches, the simplified method proposed by Ohkusu and his colleague are of special characteristics. However, when one studies their methods, several questions arise. The purpose of this paper is to critically study the simplified methods proposed by Ohkusu and his colleague in order to answer these questions. Some problems in their original methods have been found and possible improvements are suggested. It is concluded that the improved simplified method using the same idea of Ohkusu and his colleague could provide a reasonable estimate of the hydroelastic response of mat-like VLFS in a certain range of incident angles of waves.

Transient Hydroelastic Response of VLFS by FEM with Impedance Boundary Conditions in Time Domain

A time-dependent finite element method (FEM) is developed to analyze the transient hydroelastic responses of very large floating structures (VLFS) subjected to dynamic loads. The hydrodynamic problem is formulated based on the linear theory of fluid and the structural response is analyzed based on the thin plate theory. The FEM truncates the unbounded fluid domain by introducing an artificial boundary surface, thus defining a finite computational domain. At this boundary surface an impedance boundary conditions are applied so that no wave reflections occur. In the proposed scheme, all of the procedures are processed directly in time domain, which is efficient for nonlinear analyses of structure floating on unbounded fluid. Numerical results indicate acceptable accuracy of the proposed method.

Hydroelastic interaction between water waves and thin elastic plate floating on three-layer fluid

The wave-induced hydroelastic responses of a thin elastic plate floating on a three-layer fluid, under the assumption of linear potential flow, are investigated for two-dimensional cases. The effect of the lateral stretching or compressive stress is taken into account for plates of either semi-infinite or finite length. An explicit expression for the dispersion relation of the flexural-gravity wave in a three-layer fluid is analytically deduced. The equations for the velocity potential and the wave elevations are solved with the method of matched eigenfunction expansions. To simplify the calculation on the unknown expansion coefficients, a new inner product with orthogonality is proposed for the three-layer fluid, in which the vertical eigenfunctions in the open-water region are involved. The accuracy of the numerical results is checked with an energy conservation equation, representing the energy flux relation among three incident wave modes and the elastic plate. The effects of the lateral stresses on the hydroelastic responses are discussed in detail.