Retrotransposon-like elements are major constituents of most eukaryotic genomes. For example, they account for roughly 90% of the wheat (Triticum aestivum) genome, Previous study on a wheat strain treated by low-ene...Retrotransposon-like elements are major constituents of most eukaryotic genomes. For example, they account for roughly 90% of the wheat (Triticum aestivum) genome, Previous study on a wheat strain treated by low-energy N^+ ions indicated the variations in AFLP (Amplified Fragment Length Polymorphism ) markers, One such variation was caused by the re-activation of Tyl-copia-like retrotransposons, implying that the mutagenic effects of lowenergy ions might work through elevated activation of retrotransposons, In this paper an expression profile of Tyl-copia-like retrotransposons in wheat treated by low-energy N^+ ions is reported, The reverse transcriptase (RT) domains of these retrotransposons were amplified by reverse-transcriptional polymerase chain reaction (RT-PCR) and sequentially cloned, 42 and 65 clones were obtained from the treated (CL) and control materials (CK), respectively, Sequence analysis of each clone was performed by software. Phylogeny and classification were calculated responding to the sequences of the RT domains. All the results show that there is much difference in the RT domain between the control sample and the treated sample, Especially, the RT domains from the treated group encode significantly more functional ORF (open reading frames) than those from the control sample, This observation suggests that the treated sample has higher activation of retrotransposons, possibly as a consequence of low-energy ion beam irradiation, It also suggests that retrotransposons in the two groups impact the host gene expression in two different ways and carry out different functions in wheat cells.展开更多
A screen for Arabidopsis fertility mutants, mutagenized by low-energy argon ion beam, yielded two partial male-sterile mutants tc243-1 and tc243-2 which have similar phenotypes. tc243-2 was investigated in detail. The...A screen for Arabidopsis fertility mutants, mutagenized by low-energy argon ion beam, yielded two partial male-sterile mutants tc243-1 and tc243-2 which have similar phenotypes. tc243-2 was investigated in detail. The segregation ratio of the mutant phenotypes in the M2 pools suggested that mutation behaved as single Mendelian recessive mutations, tc243 showed a series of mutant phenotypes, among which partial male-sterile was its striking mutant characteristic. Phenotype analysis indicates that there are four factors leading to male sterility, a. Floral organs normally develop inside the closed bud, but the anther filaments do not elongate sufficiently to position the locules above the stigma at anthesis, b. The anther locules do not dehisce at the time of flower opening (although limited dehiscence occurs later), c. Pollens of mutant plants develop into several types of pollens at the trinucleated stage. as determined by staining with DAPI (4',6-diamidino-2-phenylindole). which shows a variable size. shape and number of nucleus. d. The viability of pollens is lower than that of the wild type on the germination test in vivo and vitro.展开更多
Ever since the low energy N+ ion beam has been accepted that the mutation effects of ionizing radiation are attributed mainly to direct or indirect damage to DNA. Evidences based on naked DNA irradiation in support of...Ever since the low energy N+ ion beam has been accepted that the mutation effects of ionizing radiation are attributed mainly to direct or indirect damage to DNA. Evidences based on naked DNA irradiation in support of a mutation spectrum appears to be consistent, but direct proof of such results in vivo are limited. Using mutS, dam and/or dcm defective Eschericha coli imitator strains, an preliminary experimental system on induction of in vivo mutation spectra of low energy N+ ion beam has been established in this study. It was observed that the mutation rates of rifampicin resistance induced by N+ implantation were quite high, ranging from 9.2 x 10~8 to 4.9× 10~5 at the dosage of 5.2×1014 ions/cm2. Strains all had more than 90-fold higher mutation rate than its spontaneous mutation rate determined by this method. It reveals that base substitutions involve in induction of mutation of low energy nitrogen ion beam implantation. The mutation rates of mutator strains were nearly 500-fold (GM2929), 400-fold (GM5864) and 6-fold larger than that of AB1157. The GM2929 and GM5864 both lose the ability of repair DNA mismatch damage by virtue of both dam and dcm pathways defective (GM2929) or failing to assemble the repair complex (GM5864) respectively. It may explain the both strains had a similar higher mutation rate than GM124 did. It indicated that DNA cytosine methylase might play an important role in mismatch repair of DNA damage induced by N+ implantation. The further related research were also discussed.展开更多
Ever since the low energy N + ion beam has been accepted, the mutations of ionizing radiation are attributable mainly to avoidance of DNA damages repair. Evidences based on in vivo proof results are limited. Using the...Ever since the low energy N + ion beam has been accepted, the mutations of ionizing radiation are attributable mainly to avoidance of DNA damages repair. Evidences based on in vivo proof results are limited. Using the E.coli wild type and mutator strains, the mutant frequencies suggest that base substitutions in rpoB gene are induced by the N + implantation. A highly conserved region is selected to get the direct evidence for base substitutions by sequence of the high fidelity PCR amplification products in mutants. Most of the mutants (90.9%, 40/44) have at least one base substitution in the amplification region. The evidences for CG to TA (55%, 22/40), AT to GC (20%, 8/40) and TA to CG (5%, 2/40) transitions are identified. The transversions are AT to TA (15%, 6/40) and GC to CG (5%, 2/40). It is suggested that DNA cytosine methylase might play an important role in mismatch repair of DNA damage induced by N + implantation by analysis of the mutant frequencies of mutator strains.展开更多
[Objective] This study aimed to explore the mutagenesis effects of N+ ion beam implantation on Streptomyces a/bus and obtain high-yield salinomycin- producing mutant strain. [ Method ] Streptomyces a/bus strain S-11-...[Objective] This study aimed to explore the mutagenesis effects of N+ ion beam implantation on Streptomyces a/bus and obtain high-yield salinomycin- producing mutant strain. [ Method ] Streptomyces a/bus strain S-11-04 was mutated with different doses of N + implantation. The effects of low energy N * implantation on the survival rate, colony morphology and salinomycin-producing ability were investigated. [ Result] The results showed that low energy N + implantation can efficiently improve the positive mutation rate of Streptomyces albus; 13 mutant strains with high yield of salinomycin were isolated; to be specific, mutant strain N3- 6 has relatively good genetic stability with four continuous generations, and the titres of salinomycin were increased by 41% in the shake-flask culture and 20.5% in mass production compared with the control. [ Conclusion ] N + ion beam irradiation is an effective method to obtain high-yield salinomycin-producing Streptomy- ces albus strain.展开更多
Nonlinear evolution of multiple toroidal Alfven eigenmodes(TAEs) driven by fast ions is self-consistently investigated by kinetic simulations in toroidal plasmas.To clearly identify the effect of nonlinear coupling on...Nonlinear evolution of multiple toroidal Alfven eigenmodes(TAEs) driven by fast ions is self-consistently investigated by kinetic simulations in toroidal plasmas.To clearly identify the effect of nonlinear coupling on the beam ion loss,simulations over single-n modes are also carried out and compared with those over multiple-n modes,and the wave-particle resonance and particle trajectory of lost ions in phase space are analyzed in detail.It is found that in the multiple-n case,the resonance overlap occurs so that the fast ion loss level is rather higher than the sum loss level that represents the summation of loss over all single-n modes in the single-n case.Moreover,increasing fast ion beta β_h can not only significantly increase the loss level in the multiple-n case but also significantly increase the loss level increment between the single-n and multiple-n cases.For example,the loss level in the multiple-n case for β_h=6.0% can even reach 13% of the beam ions and is 44% higher than the sum loss level calculated from all individual single-n modes in the single-n case.On the other hand,when the closely spaced resonance overlap occurs in the multiple-n case,the release of mode energy is increased so that the widely spaced resonances can also take place.In addition,phase space characterization is obtained in both single-n and multiple-n cases.展开更多
The potential of SCAR marker for discrimination of a Thai jasmine rice (Oryza sativa L. cv. KDML 105) mutant, BKOS6, obtained from ion-beam-induced mutation, was evaluated. The improved rice variety, BKOS6, exhibited ...The potential of SCAR marker for discrimination of a Thai jasmine rice (Oryza sativa L. cv. KDML 105) mutant, BKOS6, obtained from ion-beam-induced mutation, was evaluated. The improved rice variety, BKOS6, exhibited many remarkable characteristics which fitted the multiple cropping system characteristics of progressive agriculture including photoperiod insensitivity, early flowering, short in stature, and purple pigment accumulation in pericarp. The BKOS6 rice grain extract has already been proved that it exhibited higher antioxidant properties than the KDML 105 and other tested rice grain extracts. In this study, the BKOS6 specific SCAR marker was developed by HAT-RAPD analysis of rice genomic DNA. The marker was successfully used to identify BKOS6 variety and its hybrid varieties containing purple pigment accumulation in plant tissues. Moreover, it was found that this marker could be used to detect other purple pigmented rice varieties that genetically related to Thai jasmine rice. Recently, a wide variety of anthocyanin-based foods are believed to provide significant potential health benefits, and become more attractive. KDML 105 is also a Thai premier fragrant rice variety which is one of the main varieties of country’s rice export. Thus this molecular marker could be useful for commercial and breeding purposes of BKOS6 mutant and other developed varieties from KDML 105 which contain anthocyanin accumulation.展开更多
为了进一步提高凝结芽孢杆菌NJYHHWG 877005菌株的拮抗性能,获得生防效果更好的菌株,利用低能N^+注入菌株进行诱变,并通过平板对峙培养对诱变处理后的菌株进行筛选。结果表明,菌株存活率曲线遵循N^+注入生物效应的马鞍型曲线,根据其存...为了进一步提高凝结芽孢杆菌NJYHHWG 877005菌株的拮抗性能,获得生防效果更好的菌株,利用低能N^+注入菌株进行诱变,并通过平板对峙培养对诱变处理后的菌株进行筛选。结果表明,菌株存活率曲线遵循N^+注入生物效应的马鞍型曲线,根据其存活率及突变率确定N^+最佳注入能量为15 ke V,最佳注入剂量为140×10^(13)个/cm^2。通过筛选获得1株具有良好性状的突变株L1,芽孢形成率达77.42%,对灰葡萄孢霉菌的抑制率高达87.81%,分别较原始出发菌株提高了23.79、11.71个百分点,且连续传代培养8次,遗传稳定性良好。展开更多
基金supported by National Natural Science Foundation of China (No.10505018)Natural Science Foundation of Henan Province (No.511030400)
文摘Retrotransposon-like elements are major constituents of most eukaryotic genomes. For example, they account for roughly 90% of the wheat (Triticum aestivum) genome, Previous study on a wheat strain treated by low-energy N^+ ions indicated the variations in AFLP (Amplified Fragment Length Polymorphism ) markers, One such variation was caused by the re-activation of Tyl-copia-like retrotransposons, implying that the mutagenic effects of lowenergy ions might work through elevated activation of retrotransposons, In this paper an expression profile of Tyl-copia-like retrotransposons in wheat treated by low-energy N^+ ions is reported, The reverse transcriptase (RT) domains of these retrotransposons were amplified by reverse-transcriptional polymerase chain reaction (RT-PCR) and sequentially cloned, 42 and 65 clones were obtained from the treated (CL) and control materials (CK), respectively, Sequence analysis of each clone was performed by software. Phylogeny and classification were calculated responding to the sequences of the RT domains. All the results show that there is much difference in the RT domain between the control sample and the treated sample, Especially, the RT domains from the treated group encode significantly more functional ORF (open reading frames) than those from the control sample, This observation suggests that the treated sample has higher activation of retrotransposons, possibly as a consequence of low-energy ion beam irradiation, It also suggests that retrotransposons in the two groups impact the host gene expression in two different ways and carry out different functions in wheat cells.
基金Key Innovative Project of Chinese Academy of Sciences(No.KSCX2-SW-324)Director's Foundation of the Institute of Plasma Physics(No.152900500301)
文摘A screen for Arabidopsis fertility mutants, mutagenized by low-energy argon ion beam, yielded two partial male-sterile mutants tc243-1 and tc243-2 which have similar phenotypes. tc243-2 was investigated in detail. The segregation ratio of the mutant phenotypes in the M2 pools suggested that mutation behaved as single Mendelian recessive mutations, tc243 showed a series of mutant phenotypes, among which partial male-sterile was its striking mutant characteristic. Phenotype analysis indicates that there are four factors leading to male sterility, a. Floral organs normally develop inside the closed bud, but the anther filaments do not elongate sufficiently to position the locules above the stigma at anthesis, b. The anther locules do not dehisce at the time of flower opening (although limited dehiscence occurs later), c. Pollens of mutant plants develop into several types of pollens at the trinucleated stage. as determined by staining with DAPI (4',6-diamidino-2-phenylindole). which shows a variable size. shape and number of nucleus. d. The viability of pollens is lower than that of the wild type on the germination test in vivo and vitro.
基金The project supported by the National Nature Science Foundation of China (No. 19890300)
文摘Ever since the low energy N+ ion beam has been accepted that the mutation effects of ionizing radiation are attributed mainly to direct or indirect damage to DNA. Evidences based on naked DNA irradiation in support of a mutation spectrum appears to be consistent, but direct proof of such results in vivo are limited. Using mutS, dam and/or dcm defective Eschericha coli imitator strains, an preliminary experimental system on induction of in vivo mutation spectra of low energy N+ ion beam has been established in this study. It was observed that the mutation rates of rifampicin resistance induced by N+ implantation were quite high, ranging from 9.2 x 10~8 to 4.9× 10~5 at the dosage of 5.2×1014 ions/cm2. Strains all had more than 90-fold higher mutation rate than its spontaneous mutation rate determined by this method. It reveals that base substitutions involve in induction of mutation of low energy nitrogen ion beam implantation. The mutation rates of mutator strains were nearly 500-fold (GM2929), 400-fold (GM5864) and 6-fold larger than that of AB1157. The GM2929 and GM5864 both lose the ability of repair DNA mismatch damage by virtue of both dam and dcm pathways defective (GM2929) or failing to assemble the repair complex (GM5864) respectively. It may explain the both strains had a similar higher mutation rate than GM124 did. It indicated that DNA cytosine methylase might play an important role in mismatch repair of DNA damage induced by N+ implantation. The further related research were also discussed.
文摘Ever since the low energy N + ion beam has been accepted, the mutations of ionizing radiation are attributable mainly to avoidance of DNA damages repair. Evidences based on in vivo proof results are limited. Using the E.coli wild type and mutator strains, the mutant frequencies suggest that base substitutions in rpoB gene are induced by the N + implantation. A highly conserved region is selected to get the direct evidence for base substitutions by sequence of the high fidelity PCR amplification products in mutants. Most of the mutants (90.9%, 40/44) have at least one base substitution in the amplification region. The evidences for CG to TA (55%, 22/40), AT to GC (20%, 8/40) and TA to CG (5%, 2/40) transitions are identified. The transversions are AT to TA (15%, 6/40) and GC to CG (5%, 2/40). It is suggested that DNA cytosine methylase might play an important role in mismatch repair of DNA damage induced by N + implantation by analysis of the mutant frequencies of mutator strains.
文摘[Objective] This study aimed to explore the mutagenesis effects of N+ ion beam implantation on Streptomyces a/bus and obtain high-yield salinomycin- producing mutant strain. [ Method ] Streptomyces a/bus strain S-11-04 was mutated with different doses of N + implantation. The effects of low energy N * implantation on the survival rate, colony morphology and salinomycin-producing ability were investigated. [ Result] The results showed that low energy N + implantation can efficiently improve the positive mutation rate of Streptomyces albus; 13 mutant strains with high yield of salinomycin were isolated; to be specific, mutant strain N3- 6 has relatively good genetic stability with four continuous generations, and the titres of salinomycin were increased by 41% in the shake-flask culture and 20.5% in mass production compared with the control. [ Conclusion ] N + ion beam irradiation is an effective method to obtain high-yield salinomycin-producing Streptomy- ces albus strain.
基金Project supported by the National Key R&D Program of China(Grant No.2017YFE0301900)the National Natural Science Foundation of China(Grant No.11675083)the Fundamental Research Funds for the Central Universities of China(Grant No.DUT18ZD101).
文摘Nonlinear evolution of multiple toroidal Alfven eigenmodes(TAEs) driven by fast ions is self-consistently investigated by kinetic simulations in toroidal plasmas.To clearly identify the effect of nonlinear coupling on the beam ion loss,simulations over single-n modes are also carried out and compared with those over multiple-n modes,and the wave-particle resonance and particle trajectory of lost ions in phase space are analyzed in detail.It is found that in the multiple-n case,the resonance overlap occurs so that the fast ion loss level is rather higher than the sum loss level that represents the summation of loss over all single-n modes in the single-n case.Moreover,increasing fast ion beta β_h can not only significantly increase the loss level in the multiple-n case but also significantly increase the loss level increment between the single-n and multiple-n cases.For example,the loss level in the multiple-n case for β_h=6.0% can even reach 13% of the beam ions and is 44% higher than the sum loss level calculated from all individual single-n modes in the single-n case.On the other hand,when the closely spaced resonance overlap occurs in the multiple-n case,the release of mode energy is increased so that the widely spaced resonances can also take place.In addition,phase space characterization is obtained in both single-n and multiple-n cases.
文摘The potential of SCAR marker for discrimination of a Thai jasmine rice (Oryza sativa L. cv. KDML 105) mutant, BKOS6, obtained from ion-beam-induced mutation, was evaluated. The improved rice variety, BKOS6, exhibited many remarkable characteristics which fitted the multiple cropping system characteristics of progressive agriculture including photoperiod insensitivity, early flowering, short in stature, and purple pigment accumulation in pericarp. The BKOS6 rice grain extract has already been proved that it exhibited higher antioxidant properties than the KDML 105 and other tested rice grain extracts. In this study, the BKOS6 specific SCAR marker was developed by HAT-RAPD analysis of rice genomic DNA. The marker was successfully used to identify BKOS6 variety and its hybrid varieties containing purple pigment accumulation in plant tissues. Moreover, it was found that this marker could be used to detect other purple pigmented rice varieties that genetically related to Thai jasmine rice. Recently, a wide variety of anthocyanin-based foods are believed to provide significant potential health benefits, and become more attractive. KDML 105 is also a Thai premier fragrant rice variety which is one of the main varieties of country’s rice export. Thus this molecular marker could be useful for commercial and breeding purposes of BKOS6 mutant and other developed varieties from KDML 105 which contain anthocyanin accumulation.
文摘为了进一步提高凝结芽孢杆菌NJYHHWG 877005菌株的拮抗性能,获得生防效果更好的菌株,利用低能N^+注入菌株进行诱变,并通过平板对峙培养对诱变处理后的菌株进行筛选。结果表明,菌株存活率曲线遵循N^+注入生物效应的马鞍型曲线,根据其存活率及突变率确定N^+最佳注入能量为15 ke V,最佳注入剂量为140×10^(13)个/cm^2。通过筛选获得1株具有良好性状的突变株L1,芽孢形成率达77.42%,对灰葡萄孢霉菌的抑制率高达87.81%,分别较原始出发菌株提高了23.79、11.71个百分点,且连续传代培养8次,遗传稳定性良好。