Lautropia mirabilis is an opportunistic pathogen that typically causes intestinal and oral infections when the body’s immune system is compromised or the microbial flora is imbalanced.Respiratory infections caused by...Lautropia mirabilis is an opportunistic pathogen that typically causes intestinal and oral infections when the body’s immune system is compromised or the microbial flora is imbalanced.Respiratory infections caused by Lautropia mirabilis are extremely rare.The symptoms and severity of Lautropia mirabilis infection may vary depending on individual differences and the site of infection.Through a review of relevant literature and this case study,it has been observed that Lautropia mirabilis may also cause pulmonary infectious diseases,and in immunocompromised patients,it can lead to severe infections,potentially resulting in death.展开更多
Objective A core genome multilocus sequence typing(cgMLST)scheme to genotype and identify potential risk clonal groups(CGs)in Proteus mirabilis.Methods In this work,we propose a publicly available cgMLST scheme for P....Objective A core genome multilocus sequence typing(cgMLST)scheme to genotype and identify potential risk clonal groups(CGs)in Proteus mirabilis.Methods In this work,we propose a publicly available cgMLST scheme for P.mirabilis using chew BBACA.In total 72 complete P.mirabilis genomes,representing the diversity of this species,were used to set up a cgMLST scheme targeting 1,842 genes,635 unfinished(contig,chromosome,and scaffold)genomes were used for its validation.Results We identified a total of 205 CGs from 695 P.mirabilis strains with regional distribution characteristics.Of these,159 unique CGs were distributed in 16 countries.CG20 and CG3 carried large numbers of shared and unique antibiotic resistance genes.Nine virulence genes(papC,papD,papE,papF,papG,papH,papI,papJ,and papK)related to the P fimbrial operon that cause severe urinary tract infections were only found in CG20.These CGs require attention due to potential risks.Conclusion This research innovatively performs high-resolution molecular typing of P.mirabilis using whole-genome sequencing technology combined with a bioinformatics pipeline(chewBBACA).We found that the CGs of P.mirabilis showed regional distribution differences.We expect that our research will contribute to the establishment of cgMLST for P.mirabilis.展开更多
[Objectives]To study the prescription compatibility rules of the Tibetan medicinal material Mirabilis himalaica(Edgew.)Heimerl(Himalayan purple jasmine)based on data mining,and to provide reference for clinical applic...[Objectives]To study the prescription compatibility rules of the Tibetan medicinal material Mirabilis himalaica(Edgew.)Heimerl(Himalayan purple jasmine)based on data mining,and to provide reference for clinical application and new drug development.[Methods]The literature data were collected and the prescriptions containing Himalayan purple jasmine were sorted and classified by Microsoft Excel 2019 software.The Traditional Chinese Medicine Inheritance Computing System(TCMICS 3.0)was used to statistically analyze the high-frequency drugs and core drug combinations,the frequency of disease treatment,and the rules of"tastes transforming flavors"of drugs.The FP-tree algorithm was used to analyze the association rules among various Tibetan medicinal materials in the prescriptions,and different supports were set to analyze the compatibility rules of the prescriptions.[Results]There were a total of 129 prescriptions containing Himalayan purple jasmine,297 medicinal materials used in combination with it,and 34 Tibetan medicinal materials with a frequency of≥15.The medicinal flavors were mostly sweet,bitter,and pungent.Among the three flavors,bitterness and sweetness were the majority.At the same time,the medicinal properties were blunt,soft,cool,and warm.A total of 130 kinds of diseases were involved,among which 8 kinds of diseases such as gynecology,kidney cold and yellow water disease had a high frequency.Through association rule analysis,33 commonly used core drug combinations were obtained.The support,confidence,and frequency of the five drug combinations[Jili(Tribuli Fructus),Huangjing(Polygonati Rhizoma),Tianmendong(Root of Cochinchinese Asparagus),and Tibetan Aoruqin(Vicatia coniifolia)]→Himalayan purple jasmine were the basic prescription of Tibetan medicine Wudagen Powder.The drug combinations with higher confidence included Bibo(Piperis Longi Fructus)→Himalayan purple jasmine,Pomegranate(Punica granatum→Himalayan purple jasmine,Baidoukou(Round Cardamom Fruit)→Himalayan purple jasmine,Hezi(Chebulae Fructus)→Himalayan purple jasmine.Jili(Tribuli Fructus)→Himalayan purple jasmine,Huangjing(Polygonati Rhizoma)→Himalayan purple jasmine and Tianmendong(Root of Cochinchinese Asparagus)→Himalayan purple jasmine had highest frequency.[Conclusions]Through the TCMICS,this paper analyzed the compatibility rules of commonly used drugs containing Himalayan purple jasmine and the characteristics of the main diseases.It can be seen that Himalayan purple jasmine is sweet in taste and warm in nature.It assists sovereign drugs in the form of ministerial drugs,which enhances the effect of regulating"long"and nourishing,and plays the role of regulating"long",dispelling cold,and reconciling various drugs,which embodies the compatibility rules of sovereign and ministerial drugs of Tibetan medicines.The main diseases of Himalayan purple jasmine are related to"long"regulation,and it is mostly used in the treatment of gynecological diseases after being combined with other drugs to form a prescription.Most drugs in the prescriptions are sweet,which is the therapeutic principle of regulating"long"and nourishing,and verifies the scientific and rational principle of clinical use of Tibetan medicine.In the prescription,the medicinal properties include both warm and cool,and the medicinal taste is sweet and bitter,which is in line with the compatibility theory of"tastes transforming flavors"in traditional Tibetan medicine prescriptions.展开更多
Our study was carried out to determine the phenotypic characterization antimicrobial susceptibility of Proteus mirabilis from fish in FCT, Abuja using isolation, selective plating, preliminary observation, complete bi...Our study was carried out to determine the phenotypic characterization antimicrobial susceptibility of Proteus mirabilis from fish in FCT, Abuja using isolation, selective plating, preliminary observation, complete biochemical method and antimicrobial susceptibility testing. The biochemical tests conducted includes include Citrate Utilization test, Triple Sugar Iron test, Urea test, Methyl Red test, Indole test, and Voges Proskauer test. The isolates were confirmed by Microbact<sup>TM</sup>GNB24E identification kit (Oxiod, UK). A total of 400 fish samples were bought in the market from three area council of the FCT. The result of the study showed overall prevalence rate of (13) 3.25% of Proteus mirabilis isolates. Distribution based on Area councils showed that AMAC had higher prevalence rate of 4.81%, while Bwari had 2.99% and Gwagwalada with 2.57% prevalence. All isolates were subjected to antimicrobial susceptibility testing using the modified single disc diffusion method. From the antimicrobial susceptibility testing done it was discovered that Proteus mirabilis are resistant to Amoxyclav (100%), Erythromycin (92.3%), Tetracycline (92.3%) and Ceftriaxone (23.1%). However, the isolates were susceptible to Ofloxacin (100%), Netillin (92.3%), Levofloxacin (92.3%), Ceftazidime (76.9%), Co-trimoxazole (69.2%) and Gentamicin (61.5%). Since Proteus mirabilis sources of zoonotic diseases and can potentially be dangerous to humans and other animals, our research was able to isolate it from fresh water fish sold in the Federal Capital Territory. This makes public health awareness of the risks associated with Proteus mirabilis in Nigeria necessary.展开更多
为鉴定冀北地区养殖场中引起犊牛腹泻的病原菌,本实验于2021年~2023年采集冀北地区养殖场中患腹泻病奶肉犊牛的肛拭子、粪便及肝脏等病料样品247份,采用细菌分离培养、形态学观察、生化鉴定和ureR基因的PCR扩增等方法进行细菌的分离鉴定...为鉴定冀北地区养殖场中引起犊牛腹泻的病原菌,本实验于2021年~2023年采集冀北地区养殖场中患腹泻病奶肉犊牛的肛拭子、粪便及肝脏等病料样品247份,采用细菌分离培养、形态学观察、生化鉴定和ureR基因的PCR扩增等方法进行细菌的分离鉴定,结果显示,从采集的247份患腹泻病的奶肉犊牛病料样品中分离并鉴定到102株奇异变形杆菌(PM)。将分离菌人工感染小鼠(0.20 m L/只,含菌量为108cfu/mL),检测PM对小鼠的致病性。结果显示其中72株PM引起小鼠发病与死亡,为致病性PM,小鼠的死亡率在40%~100%。采用PCR方法及K-B药敏纸片法分别检测分离菌的毒力基因、相关耐药基因及耐药性,采用SPSS19软件中的Fisher确切概率法分析PM耐药表型与相关耐药基因之间的相关性。结果显示,毒力基因fliL、zapA、pmf A、atfA、rsb A、ureC、atfC在72株致病性PM中的检出率在63.4%~100%,其他毒力基因的检出率在2.7%~8.1%;72株致病性PM对阿莫西林、氨苄西林、安普霉素等12种药物耐药的菌株占51.4%以上,对其他药物耐药的菌株占6.9%~33.3%,均呈多重耐药性(MDR),且至少耐3类药物;72株致病性PM的β-内酰胺类耐药基因blaOXA、blaCTX-M、blaTEM,磺胺类耐药基因Sul1、Sul2、Sul3,氨基糖苷类耐药基因adA、aac(6’)-Ib,四环素类耐药基因TetA、TetM的检出率在43.2%~98.6%,其他耐药基因检出率在4.2%~33.3%,其耐药表型与耐药基因型之间基本呈正相关(除多粘菌素类和大环内酯类药物外)。本研究为致奶肉犊牛腹泻的奇异变形杆菌病的防控提供了参考。展开更多
为探究河南省某规模化兔场暴发的以精神萎靡、腹泻为主要症状的疾病病原,本实验随机选取6只病死兔剖检并观察其各组织剖检病变后,通过四区划线法分离纯化并增菌培养后,分别于普通琼脂培养基、血琼脂培养基和麦康凯琼脂培养基培养,并对...为探究河南省某规模化兔场暴发的以精神萎靡、腹泻为主要症状的疾病病原,本实验随机选取6只病死兔剖检并观察其各组织剖检病变后,通过四区划线法分离纯化并增菌培养后,分别于普通琼脂培养基、血琼脂培养基和麦康凯琼脂培养基培养,并对分离菌进行疑似病原菌的PCR鉴定、球虫检测、生化鉴定、16S r RNA基因的PCR扩增、测序和序列分析,构建分离菌16S r RNA基因的进化树,进一步确定病原菌。剖检观察可见病死兔肾脏呈土黄色、肝脏肿大有出血点、胸腺出血、脾脏萎缩呈深褐色、肺脏发白且有散在出血点等。疑似病原菌的鉴定结果显示,大肠杆菌、肺炎克雷伯氏菌、魏氏梭菌、沙门氏菌、波氏杆菌及球虫均呈阴性,且通过细菌的分离培养、16S r RNA基因的PCR扩增、测序并构建系统进化树,进一步确定引起该兔场发病的病原菌为奇异变形杆菌,并将其命名为HN001株。通过PCR检测该菌携带的毒力基因,并采集病死兔肝、肾、肠等病变组织制作病理切片,观察其病理变化。将HN001株以1011cfu/mL感染家兔,一周后剖杀,观察各组兔的剖检病变,并再次从兔的内脏分离并鉴定病原菌。毒力基因的PCR检测结果显示,HN001菌株中鞭毛基因FliL和菌毛结构亚单位基因Mrp A均为阳性,溶血素基因Hpm A、金属蛋白酶结构亚单位基因ZapA和“雾蔓”菌毛迁移能力的调控基因Rsb A均为阴性。组织病理学结果显示,病死兔肾、肝、胸腺、脾、肺脏和空肠组织均损伤严重,主要表现为炎性细胞浸润、散在分布部分红细胞等病理变化。家兔致病性试验结果显示,该病原菌感染兔后出现与自然感染兔类似的症状和脏器的剖检症状,但病变程度与自然感染兔相比较轻。且从病兔体内再次分离到与感染菌相同的菌株,表明奇异变形杆菌为该兔场暴发疾病的病原菌。本研究为兔奇异变形杆菌病的防控提供参考依据。展开更多
【目的】研究bla_(CMY-2)阳性禽源奇异变形杆菌的多重耐药特征,并分析菌株CY32全基因组序列结构。【方法】对5株bla_(CMY-2)阳性禽源奇异变形杆菌进行氟苯尼考和质粒介导氟喹诺酮类耐药基因检测、接合试验和bla_(CMY-2)基因的Southern...【目的】研究bla_(CMY-2)阳性禽源奇异变形杆菌的多重耐药特征,并分析菌株CY32全基因组序列结构。【方法】对5株bla_(CMY-2)阳性禽源奇异变形杆菌进行氟苯尼考和质粒介导氟喹诺酮类耐药基因检测、接合试验和bla_(CMY-2)基因的Southern杂交定位,对其中一株菌CY32进行全基因测序和生物信息学分析。【结果】5株奇异变形杆菌携带的bla_(CMY-2)位于染色体,其中,菌株CY12、CY32、S31和S52携带floR,菌株CY12和CY32携带qnrD。CY32的染色体同时含有SXT/R391型整合性接合元件(integrative and conjugative elements,ICEs)(ICEPmiJpn1)和PmGRI1共2种耐药基因岛。ICEs的可变区包含2个串联的复合型转座子(IS10构成),其中一个复合型转座子携带bla_(CMY-2);CY32的PmGRI1耐药岛含有12个耐药基因。与其他奇异变形杆菌携带的PmGRI1相比,多重耐药区差异最大的区域位于Tn21转座子。此外,CY32包含2个质粒,包括携带floR的IncQ质粒和携带qnrD的非接合质粒。奇异变形杆菌CY32携带15个耐药基因,呈现多重耐药的特性。【结论】奇异变形杆菌经基因岛和质粒获得多重耐药,使治疗奇异变形杆菌感染变得更加困难,应加强对动物源奇异变形杆菌耐药性监测。展开更多
Microbial biomass and species in the rhizosphere soil of Mirabilis jalapa(Linn.)(the saline-alkali soil contaminated by total petroleum hydrocarbon(TPH))were studied with the technology of phospholipid fatty ac...Microbial biomass and species in the rhizosphere soil of Mirabilis jalapa(Linn.)(the saline-alkali soil contaminated by total petroleum hydrocarbon(TPH))were studied with the technology of phospholipid fatty acids(PLFAs) analysis,to explore the effects of Mirabilis jalapa(Linn.) growth on the structure characteristics of microbial communities and degradation of TPH in the petroleum-contaminated salinealkali soil.The result showed that compared with the CK soil without Mirabilis jalapa(Linn.),the kind change rates of PLFAs were 71.4%,69.2% and 33.3% in spring,summer and autumn,respectively,and the degradation of TPH increased by 47.6%,28.3%,and 18.9% in the rhizosphere soil in spring,summer and autumn,respectively.Correlation analysis was used to determine the correlation between the degradation of TPH and the soil microbial communities:77.8% of the microbial PLFAs showed positive correlation(the correlation coefficient r﹥0) with the degradation of TPH,and 55.6% of the PLFAs had high positive correlation with the degradation of TPH with a correlation coefficient r ≥0.8.In addition,the relative contents of SAT and MONO had high correlation with the degradation of TPH in the CK soil,and the correlation coefficients were 0.92 and 0.60,respectively;but in the rhizosphere soil,42.1% of the PLFAs had positive correlation with it,and only21.1% had high positive correlation with the degradation of TPH,the relative contents of TBSAT,MONO and CYCLO had moderate or low positive correlation with the degradation of TPH,and the correlation coefficients were 0.56,0.50 and 0.07 respectively.It was shown that the growth of mirabilis jalapa(Linn.) highly affected the microbial community structure and TPH degradation speed in the rhizosphere soil,providing a theoretical basis for the research on phytoremediation of petroleumcontaminated saline-alkali soil.展开更多
文摘Lautropia mirabilis is an opportunistic pathogen that typically causes intestinal and oral infections when the body’s immune system is compromised or the microbial flora is imbalanced.Respiratory infections caused by Lautropia mirabilis are extremely rare.The symptoms and severity of Lautropia mirabilis infection may vary depending on individual differences and the site of infection.Through a review of relevant literature and this case study,it has been observed that Lautropia mirabilis may also cause pulmonary infectious diseases,and in immunocompromised patients,it can lead to severe infections,potentially resulting in death.
基金supported by grants from the National Natural Science Foundation of China[82073624]Military Biosafety Research Special Project[20SWAQX04]Independent Project[Grant No.2017ZZKTB03]。
文摘Objective A core genome multilocus sequence typing(cgMLST)scheme to genotype and identify potential risk clonal groups(CGs)in Proteus mirabilis.Methods In this work,we propose a publicly available cgMLST scheme for P.mirabilis using chew BBACA.In total 72 complete P.mirabilis genomes,representing the diversity of this species,were used to set up a cgMLST scheme targeting 1,842 genes,635 unfinished(contig,chromosome,and scaffold)genomes were used for its validation.Results We identified a total of 205 CGs from 695 P.mirabilis strains with regional distribution characteristics.Of these,159 unique CGs were distributed in 16 countries.CG20 and CG3 carried large numbers of shared and unique antibiotic resistance genes.Nine virulence genes(papC,papD,papE,papF,papG,papH,papI,papJ,and papK)related to the P fimbrial operon that cause severe urinary tract infections were only found in CG20.These CGs require attention due to potential risks.Conclusion This research innovatively performs high-resolution molecular typing of P.mirabilis using whole-genome sequencing technology combined with a bioinformatics pipeline(chewBBACA).We found that the CGs of P.mirabilis showed regional distribution differences.We expect that our research will contribute to the establishment of cgMLST for P.mirabilis.
基金Supported by 2020 Chinese Medicine(Tibetan Medicine)Doctoral Program Construction Scientific Research Support Project"Research on Clinical Positioning and Quality Standard of Tibetan Medicine Wudagen Powder Based on Data Mining Network Analysis"(BSDJS-20-13)Tibet Autonomous Region Science and Technology Plan Project"Research on Active Substances and Target Molecules of Heat-clearing Drugs in Tibetan Medicine"(XZ202001Y0003C)Tibetan Medicine"14 th Five-year Plan"Connotation Construction Project"Research on Quality Control of"Five Root Medicines"of Tibetan Medicine"(2022ZYYGH12).
文摘[Objectives]To study the prescription compatibility rules of the Tibetan medicinal material Mirabilis himalaica(Edgew.)Heimerl(Himalayan purple jasmine)based on data mining,and to provide reference for clinical application and new drug development.[Methods]The literature data were collected and the prescriptions containing Himalayan purple jasmine were sorted and classified by Microsoft Excel 2019 software.The Traditional Chinese Medicine Inheritance Computing System(TCMICS 3.0)was used to statistically analyze the high-frequency drugs and core drug combinations,the frequency of disease treatment,and the rules of"tastes transforming flavors"of drugs.The FP-tree algorithm was used to analyze the association rules among various Tibetan medicinal materials in the prescriptions,and different supports were set to analyze the compatibility rules of the prescriptions.[Results]There were a total of 129 prescriptions containing Himalayan purple jasmine,297 medicinal materials used in combination with it,and 34 Tibetan medicinal materials with a frequency of≥15.The medicinal flavors were mostly sweet,bitter,and pungent.Among the three flavors,bitterness and sweetness were the majority.At the same time,the medicinal properties were blunt,soft,cool,and warm.A total of 130 kinds of diseases were involved,among which 8 kinds of diseases such as gynecology,kidney cold and yellow water disease had a high frequency.Through association rule analysis,33 commonly used core drug combinations were obtained.The support,confidence,and frequency of the five drug combinations[Jili(Tribuli Fructus),Huangjing(Polygonati Rhizoma),Tianmendong(Root of Cochinchinese Asparagus),and Tibetan Aoruqin(Vicatia coniifolia)]→Himalayan purple jasmine were the basic prescription of Tibetan medicine Wudagen Powder.The drug combinations with higher confidence included Bibo(Piperis Longi Fructus)→Himalayan purple jasmine,Pomegranate(Punica granatum→Himalayan purple jasmine,Baidoukou(Round Cardamom Fruit)→Himalayan purple jasmine,Hezi(Chebulae Fructus)→Himalayan purple jasmine.Jili(Tribuli Fructus)→Himalayan purple jasmine,Huangjing(Polygonati Rhizoma)→Himalayan purple jasmine and Tianmendong(Root of Cochinchinese Asparagus)→Himalayan purple jasmine had highest frequency.[Conclusions]Through the TCMICS,this paper analyzed the compatibility rules of commonly used drugs containing Himalayan purple jasmine and the characteristics of the main diseases.It can be seen that Himalayan purple jasmine is sweet in taste and warm in nature.It assists sovereign drugs in the form of ministerial drugs,which enhances the effect of regulating"long"and nourishing,and plays the role of regulating"long",dispelling cold,and reconciling various drugs,which embodies the compatibility rules of sovereign and ministerial drugs of Tibetan medicines.The main diseases of Himalayan purple jasmine are related to"long"regulation,and it is mostly used in the treatment of gynecological diseases after being combined with other drugs to form a prescription.Most drugs in the prescriptions are sweet,which is the therapeutic principle of regulating"long"and nourishing,and verifies the scientific and rational principle of clinical use of Tibetan medicine.In the prescription,the medicinal properties include both warm and cool,and the medicinal taste is sweet and bitter,which is in line with the compatibility theory of"tastes transforming flavors"in traditional Tibetan medicine prescriptions.
文摘Our study was carried out to determine the phenotypic characterization antimicrobial susceptibility of Proteus mirabilis from fish in FCT, Abuja using isolation, selective plating, preliminary observation, complete biochemical method and antimicrobial susceptibility testing. The biochemical tests conducted includes include Citrate Utilization test, Triple Sugar Iron test, Urea test, Methyl Red test, Indole test, and Voges Proskauer test. The isolates were confirmed by Microbact<sup>TM</sup>GNB24E identification kit (Oxiod, UK). A total of 400 fish samples were bought in the market from three area council of the FCT. The result of the study showed overall prevalence rate of (13) 3.25% of Proteus mirabilis isolates. Distribution based on Area councils showed that AMAC had higher prevalence rate of 4.81%, while Bwari had 2.99% and Gwagwalada with 2.57% prevalence. All isolates were subjected to antimicrobial susceptibility testing using the modified single disc diffusion method. From the antimicrobial susceptibility testing done it was discovered that Proteus mirabilis are resistant to Amoxyclav (100%), Erythromycin (92.3%), Tetracycline (92.3%) and Ceftriaxone (23.1%). However, the isolates were susceptible to Ofloxacin (100%), Netillin (92.3%), Levofloxacin (92.3%), Ceftazidime (76.9%), Co-trimoxazole (69.2%) and Gentamicin (61.5%). Since Proteus mirabilis sources of zoonotic diseases and can potentially be dangerous to humans and other animals, our research was able to isolate it from fresh water fish sold in the Federal Capital Territory. This makes public health awareness of the risks associated with Proteus mirabilis in Nigeria necessary.
文摘为鉴定冀北地区养殖场中引起犊牛腹泻的病原菌,本实验于2021年~2023年采集冀北地区养殖场中患腹泻病奶肉犊牛的肛拭子、粪便及肝脏等病料样品247份,采用细菌分离培养、形态学观察、生化鉴定和ureR基因的PCR扩增等方法进行细菌的分离鉴定,结果显示,从采集的247份患腹泻病的奶肉犊牛病料样品中分离并鉴定到102株奇异变形杆菌(PM)。将分离菌人工感染小鼠(0.20 m L/只,含菌量为108cfu/mL),检测PM对小鼠的致病性。结果显示其中72株PM引起小鼠发病与死亡,为致病性PM,小鼠的死亡率在40%~100%。采用PCR方法及K-B药敏纸片法分别检测分离菌的毒力基因、相关耐药基因及耐药性,采用SPSS19软件中的Fisher确切概率法分析PM耐药表型与相关耐药基因之间的相关性。结果显示,毒力基因fliL、zapA、pmf A、atfA、rsb A、ureC、atfC在72株致病性PM中的检出率在63.4%~100%,其他毒力基因的检出率在2.7%~8.1%;72株致病性PM对阿莫西林、氨苄西林、安普霉素等12种药物耐药的菌株占51.4%以上,对其他药物耐药的菌株占6.9%~33.3%,均呈多重耐药性(MDR),且至少耐3类药物;72株致病性PM的β-内酰胺类耐药基因blaOXA、blaCTX-M、blaTEM,磺胺类耐药基因Sul1、Sul2、Sul3,氨基糖苷类耐药基因adA、aac(6’)-Ib,四环素类耐药基因TetA、TetM的检出率在43.2%~98.6%,其他耐药基因检出率在4.2%~33.3%,其耐药表型与耐药基因型之间基本呈正相关(除多粘菌素类和大环内酯类药物外)。本研究为致奶肉犊牛腹泻的奇异变形杆菌病的防控提供了参考。
文摘为探究河南省某规模化兔场暴发的以精神萎靡、腹泻为主要症状的疾病病原,本实验随机选取6只病死兔剖检并观察其各组织剖检病变后,通过四区划线法分离纯化并增菌培养后,分别于普通琼脂培养基、血琼脂培养基和麦康凯琼脂培养基培养,并对分离菌进行疑似病原菌的PCR鉴定、球虫检测、生化鉴定、16S r RNA基因的PCR扩增、测序和序列分析,构建分离菌16S r RNA基因的进化树,进一步确定病原菌。剖检观察可见病死兔肾脏呈土黄色、肝脏肿大有出血点、胸腺出血、脾脏萎缩呈深褐色、肺脏发白且有散在出血点等。疑似病原菌的鉴定结果显示,大肠杆菌、肺炎克雷伯氏菌、魏氏梭菌、沙门氏菌、波氏杆菌及球虫均呈阴性,且通过细菌的分离培养、16S r RNA基因的PCR扩增、测序并构建系统进化树,进一步确定引起该兔场发病的病原菌为奇异变形杆菌,并将其命名为HN001株。通过PCR检测该菌携带的毒力基因,并采集病死兔肝、肾、肠等病变组织制作病理切片,观察其病理变化。将HN001株以1011cfu/mL感染家兔,一周后剖杀,观察各组兔的剖检病变,并再次从兔的内脏分离并鉴定病原菌。毒力基因的PCR检测结果显示,HN001菌株中鞭毛基因FliL和菌毛结构亚单位基因Mrp A均为阳性,溶血素基因Hpm A、金属蛋白酶结构亚单位基因ZapA和“雾蔓”菌毛迁移能力的调控基因Rsb A均为阴性。组织病理学结果显示,病死兔肾、肝、胸腺、脾、肺脏和空肠组织均损伤严重,主要表现为炎性细胞浸润、散在分布部分红细胞等病理变化。家兔致病性试验结果显示,该病原菌感染兔后出现与自然感染兔类似的症状和脏器的剖检症状,但病变程度与自然感染兔相比较轻。且从病兔体内再次分离到与感染菌相同的菌株,表明奇异变形杆菌为该兔场暴发疾病的病原菌。本研究为兔奇异变形杆菌病的防控提供参考依据。
文摘【目的】研究bla_(CMY-2)阳性禽源奇异变形杆菌的多重耐药特征,并分析菌株CY32全基因组序列结构。【方法】对5株bla_(CMY-2)阳性禽源奇异变形杆菌进行氟苯尼考和质粒介导氟喹诺酮类耐药基因检测、接合试验和bla_(CMY-2)基因的Southern杂交定位,对其中一株菌CY32进行全基因测序和生物信息学分析。【结果】5株奇异变形杆菌携带的bla_(CMY-2)位于染色体,其中,菌株CY12、CY32、S31和S52携带floR,菌株CY12和CY32携带qnrD。CY32的染色体同时含有SXT/R391型整合性接合元件(integrative and conjugative elements,ICEs)(ICEPmiJpn1)和PmGRI1共2种耐药基因岛。ICEs的可变区包含2个串联的复合型转座子(IS10构成),其中一个复合型转座子携带bla_(CMY-2);CY32的PmGRI1耐药岛含有12个耐药基因。与其他奇异变形杆菌携带的PmGRI1相比,多重耐药区差异最大的区域位于Tn21转座子。此外,CY32包含2个质粒,包括携带floR的IncQ质粒和携带qnrD的非接合质粒。奇异变形杆菌CY32携带15个耐药基因,呈现多重耐药的特性。【结论】奇异变形杆菌经基因岛和质粒获得多重耐药,使治疗奇异变形杆菌感染变得更加困难,应加强对动物源奇异变形杆菌耐药性监测。
文摘Microbial biomass and species in the rhizosphere soil of Mirabilis jalapa(Linn.)(the saline-alkali soil contaminated by total petroleum hydrocarbon(TPH))were studied with the technology of phospholipid fatty acids(PLFAs) analysis,to explore the effects of Mirabilis jalapa(Linn.) growth on the structure characteristics of microbial communities and degradation of TPH in the petroleum-contaminated salinealkali soil.The result showed that compared with the CK soil without Mirabilis jalapa(Linn.),the kind change rates of PLFAs were 71.4%,69.2% and 33.3% in spring,summer and autumn,respectively,and the degradation of TPH increased by 47.6%,28.3%,and 18.9% in the rhizosphere soil in spring,summer and autumn,respectively.Correlation analysis was used to determine the correlation between the degradation of TPH and the soil microbial communities:77.8% of the microbial PLFAs showed positive correlation(the correlation coefficient r﹥0) with the degradation of TPH,and 55.6% of the PLFAs had high positive correlation with the degradation of TPH with a correlation coefficient r ≥0.8.In addition,the relative contents of SAT and MONO had high correlation with the degradation of TPH in the CK soil,and the correlation coefficients were 0.92 and 0.60,respectively;but in the rhizosphere soil,42.1% of the PLFAs had positive correlation with it,and only21.1% had high positive correlation with the degradation of TPH,the relative contents of TBSAT,MONO and CYCLO had moderate or low positive correlation with the degradation of TPH,and the correlation coefficients were 0.56,0.50 and 0.07 respectively.It was shown that the growth of mirabilis jalapa(Linn.) highly affected the microbial community structure and TPH degradation speed in the rhizosphere soil,providing a theoretical basis for the research on phytoremediation of petroleumcontaminated saline-alkali soil.