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Quantification of viable bacteria in wastewater treatment plants by using propidium monoazide combined with quantitative PCR(PMA-qPCR) 被引量:4
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作者 Dan Li Tiezheng Tong +3 位作者 Siyu Zeng Yiwen Lin Shuxu Wu Miao He 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2014年第2期299-306,共8页
The detection of viable bacteria in wastewater treatment plants (WWTPs) is very important for public health, as WWTPs are a medium with a high potential for waterborne disease transmission. The aim of this study was... The detection of viable bacteria in wastewater treatment plants (WWTPs) is very important for public health, as WWTPs are a medium with a high potential for waterborne disease transmission. The aim of this study was to use propidium monoazide (PMA) combined with the quantitative polymerase chain reaction (PMA-qPCR) to selectively detect and quantify viable bacteria cells in full-scale WWTPs in China. PMA was added to the concentrated WWTP samples at a final concentration of 100 μmol/L and the samples were incubated in the dark for 5 min, and then lighted for 4 min prior to DNA extraction and qPCR with specific primers for Escherichia coli and Enterococci, respectively. The results showed that PMA treatment removed more than 99% of DNA from non-viable cells in all the WWTP samples, while matrices in sludge samples markedly reduced the effectiveness of PMA treatment. Compared to qPCR, PMA-qPCR results were similar and highly linearly correlated to those obtained by culture assay, indicating that DNA from non-viable cells present in WWTP samples can be eliminated by PMA treatment, and that PMA-qPCR is a reliable method for detection of viable bacteria in environmental samples. This study demonstrated that PMA-qPCR is a rapid and selective detection method for viable bacteria in WWTP samples, and that WWTPs have an obvious function in removing both viable and non-viable bacteria. The results proved that PMA-qPCR is a promising detection method that has a high potential for application as a complementary method to the standard culture-based method in the future. 展开更多
关键词 propidium monoazide quantitative PCR WWTPs E. coli Enterococci
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一种DNA染料结合聚合酶链反应检测鉴别植物病原细菌死活细胞 被引量:18
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作者 冯建军 金志娟 +2 位作者 刘西莉 Norm W.Schaad 李健强 《高等学校化学学报》 SCIE EI CAS CSCD 北大核心 2008年第5期944-948,共5页
建立了一种将DNA染料(EMA)结合PCR的新分析方法,用于有效检测区分植物病原细菌死活细胞.结果表明,当用2.0 mg/L或更高浓度的EMA渗透处理含有106cfu/mL的死细胞菌悬液后再曝光处理10 min,其PCR结果呈阴性,而未经过EMA渗透处理的对应样品... 建立了一种将DNA染料(EMA)结合PCR的新分析方法,用于有效检测区分植物病原细菌死活细胞.结果表明,当用2.0 mg/L或更高浓度的EMA渗透处理含有106cfu/mL的死细胞菌悬液后再曝光处理10 min,其PCR结果呈阴性,而未经过EMA渗透处理的对应样品PCR结果呈阳性;EMA渗透处理含有适当数量病菌活细胞的种子浸泡液后,更有助于特异性检测混合体系中靶标菌活细胞.分析认为,该方法避免了传统PCR无法区分细菌死活细胞的弊端,是一种快速、灵敏且能有效鉴别病原细菌死活细胞的新方法. 展开更多
关键词 ETHIDIUM monoazide 相互作用 西瓜细菌性果斑病 聚合酶链反应 死活细胞
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基于DNA染料EMA的PCR技术检测鉴别副溶血性弧菌死活细胞 被引量:14
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作者 祝儒刚 吕淑霞 +1 位作者 刘月萍 张喆 《食品与发酵工业》 CAS CSCD 北大核心 2010年第7期144-149,共6页
将一种DNA染料(ethidium bromide monoazide,EMA)与传统的PCR技术相结合,建立了一种能有效检测纯培养条件下副溶血弧菌死活菌细胞的新方法(EMA-PCR)。研究结果表明,当用1.4μg/mL或更高浓度的EMA渗透处理含有108 CFU/mL的副溶血弧菌死... 将一种DNA染料(ethidium bromide monoazide,EMA)与传统的PCR技术相结合,建立了一种能有效检测纯培养条件下副溶血弧菌死活菌细胞的新方法(EMA-PCR)。研究结果表明,当用1.4μg/mL或更高浓度的EMA渗透处理含有108 CFU/mL的副溶血弧菌死细胞菌悬液后再经20 min曝光处理,其PCR结果呈阴性,而不经EMA处理的对照组其PCR结果则呈阳性;当EMA的用量等于或者小于2μg/mL时,副溶血弧菌活细胞的PCR扩增不会受到抑制。经EMA处理,含有不同比例的副溶血弧菌死细胞和活细胞的混合液中活的副溶血弧菌能够通过PCR被选择性的定量,最小的检测水平为10 CFU/PCR。而且,经研究发现在(10~2×105)CFU/PCR范围内,DNA相对荧光强度与死活细胞混合液中活细胞的对数具有线性关系。 展开更多
关键词 ETHIDIUM BROMIDE monoazide 聚合酶链反应 副溶血弧菌 死活细胞
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EMA-qPCR方法快速检测番茄溃疡病菌活菌研究 被引量:4
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作者 周大祥 熊书 《西南农业学报》 CSCD 北大核心 2017年第1期99-104,共6页
将叠氮溴乙锭(EMA)与实时荧光定量PCR技术相结合(EMA-q PCR),建立一种有效快速检测番茄溃疡病活菌的方法。以番茄溃疡病菌Pat-1基因为检测靶标,菌体经EMA渗透处理,再进行q PCR特异性扩增。结果显示,q PCR检测灵敏度为1.0×101CFU/m... 将叠氮溴乙锭(EMA)与实时荧光定量PCR技术相结合(EMA-q PCR),建立一种有效快速检测番茄溃疡病活菌的方法。以番茄溃疡病菌Pat-1基因为检测靶标,菌体经EMA渗透处理,再进行q PCR特异性扩增。结果显示,q PCR检测灵敏度为1.0×101CFU/m L;当EMA的浓度为2.0μg/m L时,能有效抑制1.0×107CFU/m L灭活死菌的扩增,对活菌的扩增没有影响。当活菌数在1.0×101~1.0×105CFU内,每个q PCR反应体系中活菌CFU数与Ct值呈线性相关(R2=0.987)。不同温度处理后EMA-q PCR检测番茄溃疡病菌的存活情况并与平板计数法进行比较,表明待检样品可在4和20℃短期保存。对疑似带病番茄种子样品进行EMA-q PCR检测,发现EMA-q PCR方法能减少番茄溃疡病菌PCR检测的假阳性结果。本研究建立的EMA-q PCR方法是一种能有效检测番茄溃疡病活菌的方法,并能有效避免PCR检测实际样品可能造成的假阳性结果。 展开更多
关键词 番茄溃疡病菌 叠氮溴乙锭(Ethidium monoazide bromide EMA) 实时荧光定量PCR(q PCR)
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DNA染料结合环介导等温扩增技术检测志贺氏菌死活细胞 被引量:5
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作者 李月 王丽 +1 位作者 孙远明 钟青萍 《食品工业科技》 CAS CSCD 北大核心 2011年第8期216-219,共4页
建立了一种DNA染料(EMA)结合环介导等温扩增技术(Loop-mediated isothermal amplification,LAMP)的分析方法(EMA-LAMP),用于有效检测区分病原微生物志贺氏菌的死活细胞。基于志贺氏菌ipaH基因的六个区域设计特异性的引物,检测志贺氏菌... 建立了一种DNA染料(EMA)结合环介导等温扩增技术(Loop-mediated isothermal amplification,LAMP)的分析方法(EMA-LAMP),用于有效检测区分病原微生物志贺氏菌的死活细胞。基于志贺氏菌ipaH基因的六个区域设计特异性的引物,检测志贺氏菌的死活细胞。结果表明:浓度为40μg/mL的EMA能够有效抑制109CFU/mL的死细胞扩增,而对相同浓度的活菌扩增没有影响。分析表明,该方法可以有效区分细菌的死活细胞,克服了传统PCR无法区分死活细胞的弊端,同时EMA-LAMP检测方法耗时短,检测灵敏度高,是一种能够有效鉴别病原菌死活细胞的新方法。 展开更多
关键词 ETHIDIUM monoazide 环介导等温扩增技术(LAMP) SHIGELLA 死活细胞
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叠氮溴化丙锭结合实时荧光定量PCR技术检测发酵乳中植物乳杆菌P-8活菌数 被引量:7
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作者 韩之皓 郭帅 +5 位作者 黄天 郑岩 王月娇 白梅 王记成 张和平 《食品与发酵工业》 CAS CSCD 北大核心 2019年第1期183-189,共7页
采用叠氮溴化丙锭(propidium monoazide,PMA)结合实时荧光定量PCR对乳制品中活菌DNA进行定量分析,建立一种快速而准确检测发酵乳品中植物乳杆菌P-8(Lactobacillus plantarum P-8)活菌数的新方法。通过对影响PMA作用的浓度、暗孵育和曝... 采用叠氮溴化丙锭(propidium monoazide,PMA)结合实时荧光定量PCR对乳制品中活菌DNA进行定量分析,建立一种快速而准确检测发酵乳品中植物乳杆菌P-8(Lactobacillus plantarum P-8)活菌数的新方法。通过对影响PMA作用的浓度、暗孵育和曝光时间等因素进行试验,确定最佳PMA处理方案。结果表明:L. plantarum P-8经80℃处理60 s,即为膜损伤菌;当PMA质量浓度为40μg/m L,暗孵育时间10 min,曝光时间为20 min时,PMA既不影响活菌DNA的PCR扩增,又能渗透进入细胞膜受损的死菌并抑制其PCR扩增;通过制备L.plantarum P-8质粒标准品并建立标准曲线,其表现出良好的线性关系,相关系数(R2)为0. 992 9,最低检测限为103CFU/m L,特异性良好。该方法为完善发酵乳产品益生菌活菌数的检测奠定了基础。 展开更多
关键词 植物乳杆菌 叠氮溴化丙锭(propidium monoazide PMA) 实时荧光定量PCR
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Microbiological quality of roof tank water in an urban village in southeastern China
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作者 Dong Hu Jie Zeng +4 位作者 Jing Chen Wenfang Lin Xinyan Xiao Mingbao Feng Xin Yu 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2023年第3期148-159,共12页
Urban villages are unique residential neighborhoods in urban areas in China. Roof tanks are their main form of water supply, and water quality deterioration might occur in this system because of poor hygienic conditio... Urban villages are unique residential neighborhoods in urban areas in China. Roof tanks are their main form of water supply, and water quality deterioration might occur in this system because of poor hygienic conditions and maintenance. In this study, water samples were seasonally collected from an urban village to investigate the influence of roof tanks as an additional water storage device on the variation in the microbial community structure and pathogenic gene markers. Water stagnation in the roof tank induced significant decreases in chlorine(p < 0.05), residual chlorine was as low as 0.02 mg/L in spring. Propidium monoazide(PMA)-qPCR revealed a one-magnitude higher level of total viable bacterial concentration in roof tank water samples(2.14 ± 1.81 × 105gene copies/mL) than that in input water samples(3.57 ± 2.90 × 104gene copies/mL, p < 0.05), especially in spring and summer. In addition,pathogenic fungi, Mycobacterium spp., and Legionella spp. were frequently detected in the roof tanks. Terminal users might be exposed to higher microbial risk induced by high abundance of Legionella gene marker. Spearman’s rank correlation and redundancy analysis showed that residual chlorine was the driving force that promoted bacterial colonization and shaped the microbial community. It is worth noted that the sediment in the pipe will be agitated when the water supply is restored after the water outages, which can trigger an increase in turbidity and bacterial biomass. Overall, the findings provide practical suggestions for controlling microbiological health risks in roof tanks in urban villages. 展开更多
关键词 Urban village Water storage tank Microbiological water quality Propidium monoazide(PMA)-qPCR Illumina sequencing
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