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A web based tool to merge geometric morphometric data from multiple characters 被引量:2
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作者 Ming Bai Jing Li +7 位作者 Wencheng Wang Rolf G. Beutel Benjamin Wipfle Wangang Liu ShaLi Mengna Zhang Yuanyuan Lu Xingke Yang 《Zoological Systematics》 CSCD 2017年第1期34-45,共12页
Geometric morphometrics (GM) is an important method of shape analysis and increasingly used in a wide range of scientific disciplines. Presently, a single character comparison system of geometric morphometric data i... Geometric morphometrics (GM) is an important method of shape analysis and increasingly used in a wide range of scientific disciplines. Presently, a single character comparison system of geometric morphometric data is used in almost all empirical studies, and this approach is sufficient for many scientific problems. However, the estimation of overall similarity among taxa or objects based on multiple characters is crucial in a variety of contexts (e.g. (semi-)automated identification, phenetic relationships, tracing of character evolution, phylogenetic reconstruction). Here we propose a new web-based tool for merging several geometric morphometrics data files from multiple characters into a single data file. Using this approach information from multiple characters can be compared in combination and an overall similarity estimate can be obtained in a convenient and geometrically rigorous manner. To illustrate our method, we provide an example analysis of 25 dung beetle species with seven Procrustes superimposed landmark data files representing the morphological variation of body features: the epipharynx, right mandible, pronotum, elytra, hindwing, and the metendosternite in dorsal and lateral view. All seven files were merged into a single one containing information on 649 landmark locations. The possible applications of such merged data files in different fields of science are discussed. 展开更多
关键词 Geometric morphometrics multiple characters MERGING overall similarity lcs.ios.ac.cn/-mgm.
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PIMD:An Integrative Approach for Drug Repositioning Using Multiple Characterization Fusion 被引量:1
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作者 Song He Yuqi Wen +4 位作者 Xiaoxi Yang Zhen Liu Xinyu Song Xin Huang Xiaochen Bo 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2020年第5期565-581,共17页
The accumulation of various types of drug informatics data and computational approaches for drug repositioning can accelerate pharmaceutical research and development.However,the integration of multi-dimensional drug d... The accumulation of various types of drug informatics data and computational approaches for drug repositioning can accelerate pharmaceutical research and development.However,the integration of multi-dimensional drug data for precision repositioning remains a pressing challenge.Here,we propose a systematic framework named PIMD to predict drug therapeutic properties by integrating multi-dimensional data for drug repositioning.In PIMD,drug similarity networks(DSNs)based on chemical,pharmacological,and clinical data are fused into an integrated DSN(iDSN)composed of many clusters.Rather than simple fusion,PIMD offers a systematic way to annotate clusters.Unexpected drugs within clusters and drug pairs with a high iDSN similarity score are therefore identified to predict novel therapeutic uses.PIMD provides new insights into the universality,individuality,and complementarity of different drug properties by evaluating the contribution of each property data.To test the performance of PIMD,we use chemical,pharmacological,and clinical properties to generate an iDSN.Analyses of the contributions of each drug property indicate that this iDSN was driven by all data types and performs better than other DSNs.Within the top 20 recommended drug pairs,7 drugs have been reported to be repurposed.The source code for PIMD is available at https://github.com/Sepstar/PIMD/. 展开更多
关键词 Drug repositioning Drug similarity network Multiple characterization fusion Network pharmacology Drug discovery
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On the Number of Solutions of Certain Equations over Finite Fields 被引量:4
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作者 Zheng Jun ZHAO Xi Wang CAO 《Journal of Mathematical Research and Exposition》 CSCD 2010年第6期957-966,共10页
Let Fq be a finite field with q = pf elements,where p is an odd prime.Let N(a1x12 + ···+anxn2 = bx1 ···xs) denote the number of solutions(x1,...,xn) of the equation a1x12 +·&#... Let Fq be a finite field with q = pf elements,where p is an odd prime.Let N(a1x12 + ···+anxn2 = bx1 ···xs) denote the number of solutions(x1,...,xn) of the equation a1x12 +···+ anxn2 = bx1 ···xs in Fnq,where n 5,s n,and ai ∈ F*q,b ∈ F*q.In this paper,we solve the problem which the present authors mentioned in an earlier paper,and obtain a reduction formula for the number of solutions of equation a1x21 + ··· + anxn2 = bx1 ···xs,where n 5,3 ≤ s n,under a certain restriction on coefficients.We also obtain an explicit formula for the number of solutions of equation a1x21 + ··· + anxn2 = bx1 ···xn-1 in Fqn under a restriction on n and q. 展开更多
关键词 Finite fields solutions of equation multiplicative character inclusion-exclusion principle.
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Geometric morphometrics:Current and future in China 被引量:2
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作者 Ming Bai 《Zoological Systematics》 CSCD 2017年第1期1-3,共3页
Although there were many ancient Chinese mathematicians contributed a lot on geometry, Geometric morphometrics (GM) in modern concept was not firstly proposed by Chinese. The super capability of geometric morphometr... Although there were many ancient Chinese mathematicians contributed a lot on geometry, Geometric morphometrics (GM) in modern concept was not firstly proposed by Chinese. The super capability of geometric morphometries in scientific computing and problem solving has gained a lot of attentions in the world. Until early of 21 centuries, geometric morphometries was introduced into China. Since then, GM was rapidly applied in many research fields. However, it is a pity that GM is still not well-known in China as many works are published out of China. Thus, the special issue "Geometric morphometrics: Current shape and future directions" is organized. The present issue presents a series of contributions in this scientific field. In future, there will be many considerable new developing fields on GM needed to pay more attentions, for instances, 3D geometric morphometrics, 4D analysis, visualization of amber, new machine developing, new software developing, automatic identification system, etc. Once these technical bottle-necks on 3D data collecting and merging geometric morphometric data from multiple characters could be solved, the automatic identification system and other fields based on Big Data would come true. 展开更多
关键词 Geometric morphometrics 3D LED-SIM VISUALIZATION multiple characters.
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Pointwise multipliers for Besov spaces of dominating mixed smoothness-Ⅱ 被引量:1
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作者 NGUYEN Van Kien SICKEL Winfried 《Science China Mathematics》 SCIE CSCD 2017年第11期2241-2262,共22页
We continue our investigations on pointwise multipliers for Besov spaces of dominating mixed smoothness. This time we study the algebra property of the classes S_(p,q)~rB(R^d) with respect to pointwise multiplication.... We continue our investigations on pointwise multipliers for Besov spaces of dominating mixed smoothness. This time we study the algebra property of the classes S_(p,q)~rB(R^d) with respect to pointwise multiplication. In addition, if p≤q, we are able to describe the space of all pointwise multipliers for S_(p,q)~rB(R^d). 展开更多
关键词 pointwise multipliers algebras with respect to pointwise multiplication Besov spaces of dominating mixed smoothness characterization by differences localization property
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On Incomplete Gaussian Sums
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作者 Liu Chunlei Liu Chunlei Department of Mathematics Peking University Beijing,100871 ChinaCurrent Address:Department of Mathematics Sichuan University Chengdu,610064 China 《Acta Mathematica Sinica,English Series》 SCIE CSCD 1996年第2期141-150,共10页
In this paper it is proved that sum from N=N+1 to N+H x(n)ψ(n)(?)<sub>ε</sub> H<sup>1-(1/r)</sup>q<sup>(</sup>(1/4(r-)1)+ε, where r=4,q is a prime power,χ and ψ are... In this paper it is proved that sum from N=N+1 to N+H x(n)ψ(n)(?)<sub>ε</sub> H<sup>1-(1/r)</sup>q<sup>(</sup>(1/4(r-)1)+ε, where r=4,q is a prime power,χ and ψ are multiplicative and additive characters modulo q respectively,with χ nontrivial. 展开更多
关键词 Multiplicative characters
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