Bayesian networks (BN) have many advantages over other methods in ecological modeling, and have become an increasingly popular modeling tool. However, BN are flawed in regard to building models based on inadequate e...Bayesian networks (BN) have many advantages over other methods in ecological modeling, and have become an increasingly popular modeling tool. However, BN are flawed in regard to building models based on inadequate existing knowledge. To overcome this limitation, we propose a new method that links BN with structural equation modeling (SEM). In this method, SEM is used to improve the model structure for BN. This method was used to simulate coastal phytoplankton dynamics in the Bohai Bay. We demonstrate that this hybrid approach minimizes the need for expert elicitation, generates more reasonable structures for BN models, and increases the BN model's accuracy and reliability. These results suggest that the inclusion of SEM for testing and verifying the theoretical structure during the initial construction stage improves the effectiveness of BN models, especially for complex eco-environment systems. The results also demonstrate that in the Bohai Bay, while phytoplankton biomass has the greatest influence on phytoplankton dynamics, the impact of nutrients on phytoplankton dynamics is larger than the influence of the physical environment in summer. Furthermore, although the Redfield ratio indicates that phosphorus should be the primary nutrient limiting factor, our results show that silicate plays the most important role in regulating phytoplankton dynamics in the Bohai Bay.展开更多
Under different conditions,gene regulatory networks(GRNs)of the same gene set could be similar but different.The differential analysis of GRNs under different conditions is important for understanding condition-specif...Under different conditions,gene regulatory networks(GRNs)of the same gene set could be similar but different.The differential analysis of GRNs under different conditions is important for understanding condition-specific gene regulatory relationships.In a naive approach,existing GRN inference algorithms can be used to separately estimate two GRNs under different conditions and identify the differences between them.However,in this way,the similarities between the pairwise GRNs are not taken into account.Several joint differential analysis algorithms have been proposed recently,which were proved to outperform the naive approach apparently.In this paper,we model the GRNs under different conditions with structural equation models(SEMs)to integrate gene expression data and genetic perturbations,and re-parameterize the pairwise SEMs to form an integrated model that incorporates the differential structure.Then,a Bayesian inference method is used to make joint differential analysis by solving the integrated model.We evaluated the performance of the proposed re-parametrization-based Bayesian differential analysis(ReBDA)algorithm by running simulations on synthetic data with different settings.The performance of the ReBDA algorithm was demonstrated better than another state-of-the-art joint differential analysis algorithm for SEMs ReDNet obviously.In the end,the ReBDA algorithm was applied to make differential analysis on a real human lung gene data set to illustrate its applicability and practicability.展开更多
We propose molten polymer's entanglement network deformation to be nonaffine and use transient network structural theory with the revised Liu's kinetics rate equation and the revised upper convected Maxwell co...We propose molten polymer's entanglement network deformation to be nonaffine and use transient network structural theory with the revised Liu's kinetics rate equation and the revised upper convected Maxwell constitutive equation to establish a nonaffine network structural constitutive model for studying the rheological behavior of molten Low Density Polyethylene (LDPE) and High Density Polyethylene (HDPE) in oscillatory shear. As a result, when the strain amplitude or frequency increases, the shear stress amplitude increases. At the same time, the accuracy of the nonaffine network model is higher than that of affine network model. It is clear that there is a small amount of nonaffine network deformation for LDPE melts which have long chain branches, and there is a larger amount of nonaffine network deformation in oscillatory shear for HDPE melts which has no long chain branches. So we had better consider the network deformation nonaffine when we establish the constitutive equations of polymer melts in oscillatory shear.展开更多
Identifying influential nodes in complex networks is essential for network robust and stability,such as viral marketing and information control.Various methods have been proposed to define the influence of nodes.In th...Identifying influential nodes in complex networks is essential for network robust and stability,such as viral marketing and information control.Various methods have been proposed to define the influence of nodes.In this paper,we comprehensively consider the global position and local structure to identify influential nodes.The number of iterations in the process of k-shell decomposition is taken into consideration,and the improved k-shell decomposition is then put forward.The improved k-shell decomposition and degree of target node are taken as the benchmark centrality,in addition,as is well known,the effect between node pairs is inversely proportional to the shortest path length between two nodes,and then we also consider the effect of neighbors on target node.To evaluate the performance of the proposed method,susceptible-infected(SI)model is adopted to simulate the spreading process in four real networks,and the experimental results show that the proposed method has obvious advantages over classical centrality measures in identifying influential nodes.展开更多
With the rapid development of social networks, there is a focus on marketing strategies and business models that are based on social media. In the academic world, scholars believe that online trust is a key factor con...With the rapid development of social networks, there is a focus on marketing strategies and business models that are based on social media. In the academic world, scholars believe that online trust is a key factor contributing to online purchasing behavior. This article explored several factors in social media trust and verified the moderating role of offline familiarity by using relevant research on online trust in conjunction with a structure equation model. The results show that independent variables such as reputation, SNS interaction, information quality, reciprocity, satisfaction and shared values have a positive influence on trust, whereas perceived similarity does not, and information quality is the most important factor. In addition, offline familiarity significantly moderates the relations between information quality, reciprocity, reputation, shared values and social media trust. This information is important to assist companies in developing an effective social network marketing strategy.展开更多
Opinion leaders play a critical role in network public opinion transmission, their perspectives can shape public opinion and influence policy formulation and implementation. The paper is based on SINA micro-blog, by s...Opinion leaders play a critical role in network public opinion transmission, their perspectives can shape public opinion and influence policy formulation and implementation. The paper is based on SINA micro-blog, by structural equation model, as Fudan Poisoning Event for example, On the basis of in-depth analysis of opinion leaders effect on network public opinion transmission characteristics, Explore the opinion leaders on the influence of network public opinion transmission mechanism, in order to better play a role of opinion leader's guidance of public opinion.展开更多
It is the matter for achievement of the low carbon transport system that the excessive use of private vehicles can be controlled appropriately.Not only improvement of service level of modes except private vehicle,but ...It is the matter for achievement of the low carbon transport system that the excessive use of private vehicles can be controlled appropriately.Not only improvement of service level of modes except private vehicle,but also consciousness for environmental problem of individual trip maker is important for eco-commuting promotion.On the other hand,consciousness for environment would be changed by influence of other person.Accordingly,it is aimed in the study that the structure of decision-making process for modal shift to the eco-commuting mode in the local city is described considering environmental consciousness and social interaction.For the purpose,the consciousness for the environment problem and the travel behavior of the commuter at the suburban area in the local city are investigated by the questionnaire survey.The covariance structure about the eco-consciousness is analyzed with the database of the questionnaire survey by structural equation modeling.As the result,it can be confirmed with the structural equation model that the individual environmental consciousness is strongly related with the intention of self-sacrifice and is influenced with the local interaction of the individual connections.On the other hand,the intention of modal shift for the commuting mode is analyzed with the database of the questionnaire survey.It can be found out that the environmental consciousness is not statistically significant for commuting mode choice with the present poor level of service of public transport.However,the intention of self-sacrifice for the prevention of the global warming is statistically confirmed as the factor of modal shift with the operation of eco-commuting bus service with the RP/SP integrated estimation method.As the result,the multi-agent simulation system with social interaction model for eco consciousness is developed to measure the effect of the eco-commuting promotion.For the purpose,the carbon dioxide emission is estimated based on traffic demand and road network condition in the traffic environment model.On the other hand,the relation between agents is defined based on the small world network.The proposed multi-agent simulation is applied to measure the effect of the eco-commuting promotion such as improvement of level of service on the public transport or education of eco-consciousness.The effect of the promotion plan can be observed with the proposed multi-agent system.Finally,it can be concluded that the proposed multi-agent simulation with social interaction for eco-consciousness is useful for planning of eco-commuting promotion.展开更多
基金supported by the Natural Science Foundation of Tianjin(Grant No.16JCYBJC23000)the Open Foundation of the Key Laboratory for Ecological Environment in Coastal Areas of the State Oceanic Administration(Grant No.201604)Science and Technology Foundation for Young Scholars from Tianjin Fisheries Bureau(Grant No.J2014-05)
文摘Bayesian networks (BN) have many advantages over other methods in ecological modeling, and have become an increasingly popular modeling tool. However, BN are flawed in regard to building models based on inadequate existing knowledge. To overcome this limitation, we propose a new method that links BN with structural equation modeling (SEM). In this method, SEM is used to improve the model structure for BN. This method was used to simulate coastal phytoplankton dynamics in the Bohai Bay. We demonstrate that this hybrid approach minimizes the need for expert elicitation, generates more reasonable structures for BN models, and increases the BN model's accuracy and reliability. These results suggest that the inclusion of SEM for testing and verifying the theoretical structure during the initial construction stage improves the effectiveness of BN models, especially for complex eco-environment systems. The results also demonstrate that in the Bohai Bay, while phytoplankton biomass has the greatest influence on phytoplankton dynamics, the impact of nutrients on phytoplankton dynamics is larger than the influence of the physical environment in summer. Furthermore, although the Redfield ratio indicates that phosphorus should be the primary nutrient limiting factor, our results show that silicate plays the most important role in regulating phytoplankton dynamics in the Bohai Bay.
基金supported by grants from National Natural Science Foundation of China(Nos.61502198,61572226,61472161,61876069)。
文摘Under different conditions,gene regulatory networks(GRNs)of the same gene set could be similar but different.The differential analysis of GRNs under different conditions is important for understanding condition-specific gene regulatory relationships.In a naive approach,existing GRN inference algorithms can be used to separately estimate two GRNs under different conditions and identify the differences between them.However,in this way,the similarities between the pairwise GRNs are not taken into account.Several joint differential analysis algorithms have been proposed recently,which were proved to outperform the naive approach apparently.In this paper,we model the GRNs under different conditions with structural equation models(SEMs)to integrate gene expression data and genetic perturbations,and re-parameterize the pairwise SEMs to form an integrated model that incorporates the differential structure.Then,a Bayesian inference method is used to make joint differential analysis by solving the integrated model.We evaluated the performance of the proposed re-parametrization-based Bayesian differential analysis(ReBDA)algorithm by running simulations on synthetic data with different settings.The performance of the ReBDA algorithm was demonstrated better than another state-of-the-art joint differential analysis algorithm for SEMs ReDNet obviously.In the end,the ReBDA algorithm was applied to make differential analysis on a real human lung gene data set to illustrate its applicability and practicability.
文摘We propose molten polymer's entanglement network deformation to be nonaffine and use transient network structural theory with the revised Liu's kinetics rate equation and the revised upper convected Maxwell constitutive equation to establish a nonaffine network structural constitutive model for studying the rheological behavior of molten Low Density Polyethylene (LDPE) and High Density Polyethylene (HDPE) in oscillatory shear. As a result, when the strain amplitude or frequency increases, the shear stress amplitude increases. At the same time, the accuracy of the nonaffine network model is higher than that of affine network model. It is clear that there is a small amount of nonaffine network deformation for LDPE melts which have long chain branches, and there is a larger amount of nonaffine network deformation in oscillatory shear for HDPE melts which has no long chain branches. So we had better consider the network deformation nonaffine when we establish the constitutive equations of polymer melts in oscillatory shear.
文摘Identifying influential nodes in complex networks is essential for network robust and stability,such as viral marketing and information control.Various methods have been proposed to define the influence of nodes.In this paper,we comprehensively consider the global position and local structure to identify influential nodes.The number of iterations in the process of k-shell decomposition is taken into consideration,and the improved k-shell decomposition is then put forward.The improved k-shell decomposition and degree of target node are taken as the benchmark centrality,in addition,as is well known,the effect between node pairs is inversely proportional to the shortest path length between two nodes,and then we also consider the effect of neighbors on target node.To evaluate the performance of the proposed method,susceptible-infected(SI)model is adopted to simulate the spreading process in four real networks,and the experimental results show that the proposed method has obvious advantages over classical centrality measures in identifying influential nodes.
文摘With the rapid development of social networks, there is a focus on marketing strategies and business models that are based on social media. In the academic world, scholars believe that online trust is a key factor contributing to online purchasing behavior. This article explored several factors in social media trust and verified the moderating role of offline familiarity by using relevant research on online trust in conjunction with a structure equation model. The results show that independent variables such as reputation, SNS interaction, information quality, reciprocity, satisfaction and shared values have a positive influence on trust, whereas perceived similarity does not, and information quality is the most important factor. In addition, offline familiarity significantly moderates the relations between information quality, reciprocity, reputation, shared values and social media trust. This information is important to assist companies in developing an effective social network marketing strategy.
文摘Opinion leaders play a critical role in network public opinion transmission, their perspectives can shape public opinion and influence policy formulation and implementation. The paper is based on SINA micro-blog, by structural equation model, as Fudan Poisoning Event for example, On the basis of in-depth analysis of opinion leaders effect on network public opinion transmission characteristics, Explore the opinion leaders on the influence of network public opinion transmission mechanism, in order to better play a role of opinion leader's guidance of public opinion.
基金The research is granted by Japanese Ministry of Education as a part of Grants-in-Aid for Scientific Research,No.(C)22560533.The author records here warmest appreciation to the Resident Conference for Environment of Tokushima Prefecture for collecting the data in the field of actual travel behavior on the social experiment.
文摘It is the matter for achievement of the low carbon transport system that the excessive use of private vehicles can be controlled appropriately.Not only improvement of service level of modes except private vehicle,but also consciousness for environmental problem of individual trip maker is important for eco-commuting promotion.On the other hand,consciousness for environment would be changed by influence of other person.Accordingly,it is aimed in the study that the structure of decision-making process for modal shift to the eco-commuting mode in the local city is described considering environmental consciousness and social interaction.For the purpose,the consciousness for the environment problem and the travel behavior of the commuter at the suburban area in the local city are investigated by the questionnaire survey.The covariance structure about the eco-consciousness is analyzed with the database of the questionnaire survey by structural equation modeling.As the result,it can be confirmed with the structural equation model that the individual environmental consciousness is strongly related with the intention of self-sacrifice and is influenced with the local interaction of the individual connections.On the other hand,the intention of modal shift for the commuting mode is analyzed with the database of the questionnaire survey.It can be found out that the environmental consciousness is not statistically significant for commuting mode choice with the present poor level of service of public transport.However,the intention of self-sacrifice for the prevention of the global warming is statistically confirmed as the factor of modal shift with the operation of eco-commuting bus service with the RP/SP integrated estimation method.As the result,the multi-agent simulation system with social interaction model for eco consciousness is developed to measure the effect of the eco-commuting promotion.For the purpose,the carbon dioxide emission is estimated based on traffic demand and road network condition in the traffic environment model.On the other hand,the relation between agents is defined based on the small world network.The proposed multi-agent simulation is applied to measure the effect of the eco-commuting promotion such as improvement of level of service on the public transport or education of eco-consciousness.The effect of the promotion plan can be observed with the proposed multi-agent system.Finally,it can be concluded that the proposed multi-agent simulation with social interaction for eco-consciousness is useful for planning of eco-commuting promotion.