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Non-coding RNAs in acute ischemic stroke:from brain to periphery
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作者 Shuo Li Zhaohan Xu +7 位作者 Shiyao Zhang Huiling Sun Xiaodan Qin Lin Zhu Teng Jiang Junshan Zhou Fuling Yan Qiwen Deng 《Neural Regeneration Research》 SCIE CAS 2025年第1期116-129,共14页
Acute ischemic stroke is a clinical emergency and a condition with high morbidity,mortality,and disability.Accurate predictive,diagnostic,and prognostic biomarkers and effective therapeutic targets for acute ischemic ... Acute ischemic stroke is a clinical emergency and a condition with high morbidity,mortality,and disability.Accurate predictive,diagnostic,and prognostic biomarkers and effective therapeutic targets for acute ischemic stroke remain undetermined.With innovations in high-throughput gene sequencing analysis,many aberrantly expressed non-coding RNAs(ncRNAs)in the brain and peripheral blood after acute ischemic stroke have been found in clinical samples and experimental models.Differentially expressed ncRNAs in the post-stroke brain were demonstrated to play vital roles in pathological processes,leading to neuroprotection or deterioration,thus ncRNAs can serve as therapeutic targets in acute ischemic stroke.Moreover,distinctly expressed ncRNAs in the peripheral blood can be used as biomarkers for acute ischemic stroke prediction,diagnosis,and prognosis.In particular,ncRNAs in peripheral immune cells were recently shown to be involved in the peripheral and brain immune response after acute ischemic stroke.In this review,we consolidate the latest progress of research into the roles of ncRNAs(microRNAs,long ncRNAs,and circular RNAs)in the pathological processes of acute ischemic stroke–induced brain damage,as well as the potential of these ncRNAs to act as biomarkers for acute ischemic stroke prediction,diagnosis,and prognosis.Findings from this review will provide novel ideas for the clinical application of ncRNAs in acute ischemic stroke. 展开更多
关键词 acute ischemic stroke apoptosis blood–brain barrier damage circular rnas excitatory toxicity long non-coding rnas micrornas NEUROINFLAMMATION non-coding rnas oxidative stress
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Navigating the labyrinth of long non-coding RNAs in colorectal cancer:From chemoresistance to autophagy
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作者 Jia-Mei Yu Chong-Qi Sun +5 位作者 Huan-Huan Xu Ya-Li Jiang Xing-Yu Jiang Si-Qi Ni Ting-Yu Zhao Ling-Xiang Liu 《World Journal of Gastrointestinal Oncology》 SCIE 2024年第8期3376-3381,共6页
Long non-coding RNAs(lncRNAs),with transcript lengths exceeding 200 nucleotides and little or no protein-coding capacity,have been found to impact colorectal cancer(CRC)through various biological processes.LncRNA expr... Long non-coding RNAs(lncRNAs),with transcript lengths exceeding 200 nucleotides and little or no protein-coding capacity,have been found to impact colorectal cancer(CRC)through various biological processes.LncRNA expression can regulate autophagy,which plays dual roles in the initiation and progression of cancers,including CRC.Abnormal expression of lncRNAs is associated with the emergence of chemoresistance.Moreover,it has been confirmed that targeting autophagy through lncRNA regulation could be a viable approach for combating chemoresistance.Two recent studies titled“Human β-defensin-1 affects the mammalian target of rapamycin pathway and autophagy in colon cancer cells through long non-coding RNA TCONS_00014506”and“Upregulated lncRNA PRNT promotes progression and oxaliplatin resistance of colorectal cancer cells by regulating HIPK2 transcription”revealed novel insights into lncRNAs associated with autophagy and oxaliplatin resistance in CRC,respectively.In this editorial,we particularly focus on the regulatory role of lncRNAs in CRC-related autophagy and chemoresistance since the regulation of chemotherapeutic sensitivity by intervening with the lncRNAs involved in the autophagy process has become a promising new approach for cancer treatment. 展开更多
关键词 Long non-coding rna AUTOPHAGY CHEMORESISTANCE OXALIPLATIN Colorectal cancer
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Non-coding RNA as future target for diagnose and treatment of perineural invasion in cancers
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作者 BINGJIE LI WENBO CAO +4 位作者 JINJING XIAO YIXIAO CHEN QIYING WEI MINGJIN YUE SAIJUN MO 《BIOCELL》 SCIE 2024年第6期923-934,共12页
Perineural invasion(PNI),a particularly insidious form of tumor metastasis distinct from hematogenous or lymphatic spread,has the capacity to extend well beyond the primary tumor site,infiltrating distant regions devoi... Perineural invasion(PNI),a particularly insidious form of tumor metastasis distinct from hematogenous or lymphatic spread,has the capacity to extend well beyond the primary tumor site,infiltrating distant regions devoid of lymphatic or vascular structures.PNI often heralds a decrease in patient survival rates and is recognized as an indicator of an unfavorable prognosis across a variety of cancers.Despite its clinical significance,the underlying molecular mechanisms of PNI remain elusive,complicating the development of specific and efficacious diagnostic and therapeutic strategies.In the realm of cancer research,non-coding RNAs(ncRNAs)have attracted considerable attention due to their multifaceted roles and cancer-specific expression profiles,positioning them as promising candidates for applications in cancer diagnostics,prognostics,and treatment.Among the various types of ncRNAs,microRNAs(miRNAs),long non-coding RNAs(lncRNAs),and circular RNAs(circRNAs)have emerged as influential players in PNI.Their involvement is increasingly recognized as a contributing factor to tumor progression and therapeutic resistance.Our study synthesizes and explores the diverse functions and mechanisms of ncRNAs in relation to PNI in cancer.This comprehensive review aims to shed light on cutting-edge perspectives that could pave the way for innovative diagnostic and therapeutic approaches to address the challenges posed by PNI in oncology. 展开更多
关键词 Perineural invasion non-coding rna Diagnose and treatment Cancer BIOMARKER
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Expression and significant roles of the long non-coding RNA CASC19/miR-491-5p/HMGA2 axis in the development of gastric cancer
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作者 Li-Xiang Zhang Pan-Quan Luo +2 位作者 Zhi-Jian Wei A-Man Xu Tao Guo 《World Journal of Gastrointestinal Oncology》 SCIE 2024年第8期3559-3584,共26页
BACKGROUND Gastric cancer(GC)is a common malignant tumor,long non-coding RNA and microRNA(miRNA)are important regulators that affect tumor proliferation,metastasis and chemotherapy resistance,and thus participate in t... BACKGROUND Gastric cancer(GC)is a common malignant tumor,long non-coding RNA and microRNA(miRNA)are important regulators that affect tumor proliferation,metastasis and chemotherapy resistance,and thus participate in tumor progression.CASC19 is a new bio-marker which can promote tumor invasion and metastasis.However,the mechanism by which CASC19 affects the progression of GC through miRNA is not clear.AIM To explore the role of the CASC19/miR-491-5p/HMGA2 regulatory axis in GC.METHODS To explore the expression and prognosis of CASC19 in GC through clinical samples,and investigate the effects of inhibiting CASC19 on the proliferation,migration,invasion and other functions of GC cells through cell counting Kit-8(CCK-8),ethynyldeoxyuridine,Wound healing assay,Transwell,Western blot and flow cytometry experiments.The effect of miR-491-5p and HMGA2 in GC were also proved.The regulatory relationship between CASC19 and miR-491-5p,miR-491-5p and HMGA2 were validated through Dual-luciferase reporter gene assay and reverse transcription PCR.Then CCK-8,Transwell,Wound healing assay,flow cytometry and animal experiments verify the role of CASC19/miR-491-5p/HMGA2 regulatory axis.RESULTS The expression level of CASC19 is related to the T stage,N stage,and tumor size of patients.Knockdown of the expression of CASC19 can inhibit the ability of proliferation,migration,invasion and EMT conversion of GC cells,and knocking down the expression of CASC19 can promote the apoptosis of GC cells.Increasing the expression of miR-491-5p can inhibit the proliferation of GC cells,miR-491-5p mimics can inhibit EMT conversion,and promote the apoptosis of GC cells,while decreasing the expression of miR-491-5p can promote the proliferation and EMT conversion and inhibit the apoptosis of GC cells.The expression of HMGA2 in GC tissues is higher than that in adjacent tissues.At the same time,the expression level of HMGA2 is related to the N and T stages of the patients.Reducing the level of HMGA2 can promote cell apoptosis and inhibit the proliferation of GC cells.Cell experiments and animal experiments have proved that CASC19 can regulates the expression of HMGA2 through miR-491-5p,thereby affecting the biological functions of GC.CONCLUSION CASC19 regulates the expression of HMGA2 through miR-491-5p to affect the development of GC.This axis may serve as a potential biomarker and therapeutic target of GC. 展开更多
关键词 Gastric cancer Long non-coding rna CASC19 miR-491-5p HMGA2 PROGNOSIS
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Long non-coding RNA GATA6-AS1 is mediated by N6-methyladenosine methylation and inhibits the proliferation and metastasis of gastric cancer
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作者 Jun-Jie Shen Min-Chang Li +1 位作者 Shao-Qi Tian Wen-Ming Chen 《World Journal of Gastrointestinal Oncology》 SCIE 2024年第3期1019-1028,共10页
BACKGROUND Through experimental research on the biological function of GATA6-AS1,it was confirmed that GATA6-AS1 can inhibit the proliferation,invasion,and migration of gastric cancer cells,suggesting that GATA6-AS1 p... BACKGROUND Through experimental research on the biological function of GATA6-AS1,it was confirmed that GATA6-AS1 can inhibit the proliferation,invasion,and migration of gastric cancer cells,suggesting that GATA6-AS1 plays a role as an anti-oncogene in the occurrence and development of gastric cancer.Further experi-ments confirmed that the overexpression of fat mass and obesity-associated protein(FTO)inhibited the expression of GATA6-AS1,thereby promoting the occurrence and development of gastric cancer.AIM To investigate the effects of GATA6-AS1 on the proliferation,invasion and migration of gastric cancer cells and its mechanism of action.METHODS We used bioinformatics methods to analyze the Cancer Genome Atlas(https://portal.gdc.cancer.gov/.The Cancer Genome Atlas)and download expression data for GATA6-AS1 in gastric cancer tissue and normal tissue.We also constructed a GATA6-AS1 lentivirus overexpression vector which was transfected into gastric cancer cells to investigate its effects on proliferation,migration and invasion,and thereby clarify the expression of GATA6-AS1 in gastric cancer and its biological role in the genesis and development of gastric cancer.Next,we used a database(http://starbase.sysu.edu.cn/starbase2/)to analysis GATA6-AS1 whether by m6A methylation modify regulation and predict the methyltransferases that may methylate GATA6-AS1.Furthermore,RNA immunoprecipitation experiments confirmed that GATA6-AS1 was able to bind to the m6A methylation modification enzyme.These data allowed us to clarify the ability of m6A methylase to influence the action of GATA6-AS1 and its role in the occurrence and development of gastric cancer.RESULTS Low expression levels of GATA6-AS1 were detected in gastric cancer.We also determined the effects of GATA6-AS1 overexpression on the biological function of gastric cancer cells.GATA6-AS1 had strong binding ability with the m6A demethylase FTO,which was expressed at high levels in gastric cancer and negatively correlated with the expression of GATA6-AS1.Following transfection with siRNA to knock down the expression of FTO,the expression levels of GATA6-AS1 were up-regulated.Finally,the proliferation,migration and invasion of gastric cancer cells were all inhibited following the knockdown of FTO expression.CONCLUSION During the occurrence and development of gastric cancer,the overexpression of FTO may inhibit the expression of GATA6-AS1,thus promoting the proliferation and metastasis of gastric cancer. 展开更多
关键词 Long non-coding rna GATA6-AS1 N6-methyladenine modification Fat mass and obesity-associated protein Gastric cancer
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Molecular hallmarks of long non-coding RNAs in aging and its significant effect on aging-associated diseases 被引量:4
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作者 Syed Aoun Mehmood Sherazi Asim Abbasi +9 位作者 Abdullah Jamil Mohammad Uzair Ayesha Ikram Shanzay Qamar Adediji Ayomide Olamide Muhammad Arshad Peter J.Fried Milos Ljubisavljevic Ran Wang Shahid Bashir 《Neural Regeneration Research》 SCIE CAS CSCD 2023年第5期959-968,共10页
Aging is linked to the deterioration of many physical and cognitive abilities and is the leading risk factor for Alzheimer’s disease. The growing aging population is a significant healthcare problem globally that res... Aging is linked to the deterioration of many physical and cognitive abilities and is the leading risk factor for Alzheimer’s disease. The growing aging population is a significant healthcare problem globally that researchers must investigate to better understand the underlying aging processes. Advances in microarrays and sequencing techniques have resulted in deeper analyses of diverse essential genomes(e.g., mouse, human, and rat) and their corresponding cell types, their organ-specific transcriptomes, and the tissue involved in aging. Traditional gene controllers such as DNA-and RNA-binding proteins significantly influence such programs, causing the need to sort out long non-coding RNAs, a new class of powerful gene regulatory elements. However, their functional significance in the aging process and senescence has yet to be investigated and identified. Several recent researchers have associated the initiation and development of senescence and aging in mammals with several well-reported and novel long non-coding RNAs. In this review article, we identified and analyzed the evolving functions of long non-coding RNAs in cellular processes, including cellular senescence, aging, and age-related pathogenesis, which are the major hallmarks of long non-coding RNAs in aging. 展开更多
关键词 AGING Alzheimer’s disease DNA sequence EPIGENETICS immune non-coding rna OLIGONUCLEOTIDES telomere-associated
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Involvement of long non-coding RNAs in pear fruit senescence under high-and low-temperature conditions 被引量:4
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作者 Yuhang Zhou Xueping Wang +3 位作者 Kaijie Qi Jianping Bao Shaoling Zhang Chao Gu 《Horticultural Plant Journal》 SCIE CAS CSCD 2023年第2期224-236,共13页
Pear fruit senescence under high-and low-temperature conditions has been reported to be mediated by microRNAs.Long non-coding RNAs(lncRNAs),which can function as competing endogenous RNAs that interact with microRNAs,... Pear fruit senescence under high-and low-temperature conditions has been reported to be mediated by microRNAs.Long non-coding RNAs(lncRNAs),which can function as competing endogenous RNAs that interact with microRNAs,may also be involved in temperature-affected fruit senescence.Based on the transcriptome and microRNA sequencings,in this study,3330 lncRNAs were isolated from Pyrus pyrifolia fruit.Of these lncRNAs,2060 and 537 were responsive to high-and low-temperature conditions,respectively.Of these differentially expressed lncRNAs,82 and 24 correlated to the mRNAs involved in fruit senescence under high-and low-temperature conditions,respectively.Moreover,three lncRNAs were predicted to be competing endogenous RNAs(ceRNAs)that interact with the microRNAs involved in fruit senescence,while one and two ceRNAs were involved in fruit senescence under high-and low-temperature conditions,respectively.A dual-luciferase assay showed that the interaction of an lncRNA with a microRNA disrupts the action of the microRNA on the expression of its target mRNA(s).Furthermore,four alternative splicing-derived lncRNAs interacted with miR172i homologies(Novel_88 and Novel_69)to relieve the repressed expression of their target and produce an miR172i precursor.Correlation analysis of microRNA expression suggested that Novel_69 is likely involved in the cleavage of the pre-miR172i hairpin to generate mature miR172i.Taken together,lncRNAs are involved in pear fruit senescence under high-or low-temperature conditions through ceRNAs and the production of microRNA. 展开更多
关键词 Pyrus pyrifolia Long non-coding rna(lncrna) Fruit senescence High-temperature LOW-TEMPERATURE lncrna-microrna-mrna interaction
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Emerging roles of non-coding RNAs in colorectal cancer oxaliplatin resistance and liquid biopsy potential 被引量:1
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作者 Zheng-Dong Luo Yi-Feng Wang +7 位作者 Yu-Xiao Zhao Long-Chen Yu Tian Li Ying-Jing Fan Shun-Jie Zeng Yan-Li Zhang Yi Zhang Xin Zhang 《World Journal of Gastroenterology》 SCIE CAS 2023年第1期1-18,共18页
Colorectal cancer(CRC)is one of the most common malignancies of the digestive tract,with the annual incidence and mortality increasing consistently.Oxaliplatinbased chemotherapy is a preferred therapeutic regimen for ... Colorectal cancer(CRC)is one of the most common malignancies of the digestive tract,with the annual incidence and mortality increasing consistently.Oxaliplatinbased chemotherapy is a preferred therapeutic regimen for patients with advanced CRC.However,most patients will inevitably develop resistance to oxaliplatin.Many studies have reported that non-coding RNAs(ncRNAs),such as microRNAs,long non-coding RNAs,and circular RNAs,are extensively involved in cancer progression.Moreover,emerging evidence has revealed that ncRNAs mediate chemoresistance to oxaliplatin by transcriptional and post-transcriptional regulation,and by epigenetic modification.In this review,we summarize the mechanisms by which ncRNAs regulate the initiation and development of CRC chemoresistance to oxaliplatin.Furthermore,we investigate the clinical application of ncRNAs as promising biomarkers for liquid CRC biopsy.This review provides new insights into overcoming oxaliplatin resistance in CRC by targeting ncRNAs. 展开更多
关键词 Colorectal cancer non-coding rnas OXALIPLATIN RESISTANCE Liquid biopsy biomarkers
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The Dual Role of Non-coding RNAs in the Development of Periodontitis
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作者 XU Xi LANG Guang Ping +2 位作者 CHEN Zhong Lan WANG Jing Le HAN Ying Ying 《Biomedical and Environmental Sciences》 SCIE CAS CSCD 2023年第8期743-755,共13页
This review aims to sum up how Non-coding RNAs(ncRNAs)regulate the development of periodontitis and provides a new perspective for understanding the pathogenesis of periodontitis.We explored the ncRNA's dual role ... This review aims to sum up how Non-coding RNAs(ncRNAs)regulate the development of periodontitis and provides a new perspective for understanding the pathogenesis of periodontitis.We explored the ncRNA's dual role in the development of periodontitis by summarizing evidence from previous in vivo and in vitro studies as well as clinical samples.In our review,the downregulation of 18 miRNAs,22 lncRNAs and 10 circRNAs demonstrates protective roles in periodontitis.In contrast,the expression of other 11 miRNAs,7 lncRNAs and 6 circRNAs are upregulated in periodontitis,which promote the progression of periodontitis.These dysregulated ncRNAs exert their protective or destructive roles by mainly influencing cell proliferation,differentiation and apoptosis via cross-talking with various molecules or signaling pathways.Our findings suggested which and how ncRNAs promote or delay the progression of periodontitis,which may greatly contribute to diagnose and therapy development of periodontitis based on ncRNAs in the future. 展开更多
关键词 PERIODONTITIS MICROrna Long non-coding rna Circular rna non-coding rna
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Identification and Characterization of Long Non-Coding RNAs Involved in Sex-Related Gene Regulation in Kelp Saccharina japonica
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作者 BAI Meihan YUE Shutao +4 位作者 WANG Weiwei DU Xinxin LI Xiaojie YANG Guanpin ZHANG Linan 《Journal of Ocean University of China》 SCIE CAS CSCD 2023年第3期755-765,共11页
Long non-coding RNAs(lncRNAs)regulate a variety of biological processes,including sexual reproduction and differentiation.Saccharina japonica,a commercially important brown alga in China,shows remarkable sexual dimorp... Long non-coding RNAs(lncRNAs)regulate a variety of biological processes,including sexual reproduction and differentiation.Saccharina japonica,a commercially important brown alga in China,shows remarkable sexual dimorphism in haploid gametophytes.The sex of Saccharina japonica gametophytes is determined by UV sexual system.However,no results have been reported on the lncRNAs involved in the sex-related gene regulation of S.japonica.This study identified a number of lncRNAs and assessed their expression levels in male and female gametophytes.Among them,a total of 405 lncRNAs and 211 mRNAs showed differential expressions.Furthermore,the functions of target genes of differentially expressed lncRNAs(DELs)differed from those of differentially expressed genes(DEGs),suggesting that lncRNA may interact with other functional proteins,in addition to DEGs,to involve sex regulation in S.japonica.There were 32 and 90 potential cis-regulatory and trans-regulatory interactions between DELsDEGs,respectively.Five of these lncRNAs(LNC_002974,LNC_021059,LNC_038466,LNC_051584,and LNC_027400)interacted with putative male sex determination region(SDR)genes,suggesting that they act as regulators in gametophytes'sex regulation potentially.Findings from this study contribute to our understanding of the roles of lncRNAs in sex differentiation and lay the foundation for functional studies of candidate lncRNAs in the future. 展开更多
关键词 Saccharina japonica long non-coding rnas sex differentiation GAMETOPHYTE brown algae
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Expression profile of long non-coding RNAs in the intestine of black rockfish Sebastes schlegelii in response to Edwardsiella tarda infection
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作者 Xu YAN Min CAO +4 位作者 Qiang FU Ning YANG Ningning WANG Lin SONG Chao LI 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第1期376-391,共16页
Long non-coding RNAs(lncRNAs)are a class of transcripts longer than 200 bp,which have been emerged as essential regulators in numerous biological processes.Black rockfish(Sebastes schlegelii)is an economic fish that w... Long non-coding RNAs(lncRNAs)are a class of transcripts longer than 200 bp,which have been emerged as essential regulators in numerous biological processes.Black rockfish(Sebastes schlegelii)is an economic fish that widely cultured in the coastal areas of China,Japan,and South Korea.With the expansion of aquacultural scale,various pathogens have threatened its industry and reduced its economic values.It has been reported that lncRNA were involved in the immune response and metabolic pathway in teleost,while no study is available on identification and functional analysis of lncRNAs in black rockfish so far.Herein,this study was performed to identify lncRNAs in the intestine of black rockfish after Edwardsiella tarda infection.In our results,a total of 9311 lncRNAs were identified through highthroughput sequencing,and 102 lncRNAs were significantly regulated following challenge,which were predicted to target 3348 mRNAs.Results of Gene Ontology(GO)and Kyoto Encyclopedia of Genes and Genomes(KEGG)enrichment analyses of the se target genes showed they were function in catalytic activity,hydrolase activity,defense response and peptidase activity,which involved in metabolic pathways and immune related pathways.In addition,47 lncRNAs and 8 differentially expressed mRNAs(DEmRNAs)showed co-expression at two or more infection time points with metabolism and immunity functions.Moreover,real-time quantitative PCR(qRT-PCR)was performed to verify the reliability of sequencing gene expression analysis results.This research laid the foundation for further investigation of the regulatory roles of lncRNAs in the intestinal immune response of black rockfish. 展开更多
关键词 long non-coding rna Mrna INTESTINE Sebastes schlegelii Edwardsiella tarda
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Non-coding RNAs:The potential biomarker or therapeutic target in hepatic ischemia-reperfusion injury
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作者 Jia-Li Shao Li-Juan Wang +1 位作者 Ji Xiao Jin-Feng Yang 《World Journal of Gastroenterology》 SCIE CAS 2023年第33期4927-4941,共15页
Hepatic ischemia-reperfusion injury(HIRI)is the major complication of liver surgery and liver transplantation,that may increase the postoperative morbidity,mortality,tumor progression,and metastasis.The underlying mec... Hepatic ischemia-reperfusion injury(HIRI)is the major complication of liver surgery and liver transplantation,that may increase the postoperative morbidity,mortality,tumor progression,and metastasis.The underlying mechanisms have been extensively investigated in recent years.Among these,oxidative stress,inflammatory responses,immunoreactions,and cell death are the most studied.Non-coding RNAs(ncRNAs)are defined as the RNAs that do not encode proteins,but can regulate gene expressions.In recent years,ncRNAs have emerged as research hotspots for various diseases.During the progression of HIRI,ncRNAs are differentially expressed,while these dysregulations of ncRNAs,in turn,have been verified to be related to the above pathological processes involved in HIRI.ncRNAs mainly contain microRNAs,long ncRNAs,and circular RNAs,some of which have been reported as biomarkers for early diagnosis or assessment of liver damage severity,and as therapeutic targets to attenuate HIRI.Here,we briefly summarize the common pathophysiology of HIRI,describe the current knowledge of ncRNAs involved in HIRI in animal and human studies,and discuss the potential of ncRNA-targeted therapeutic strategies.Given the scarcity of clinical trials,there is still a long way to go from pre-clinical to clinical application,and further studies are needed to uncover their potential as therapeutic targets. 展开更多
关键词 Hepatic ischemia-reperfusion injury non-coding rnas MICROrnas Long non-coding rnas Circular rnas
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A double-edged sword:The HBV-induced non-coding RNAs alterations in hepatocellular carcinoma
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作者 TIANXING LIU HONGYAN DIAO 《BIOCELL》 SCIE 2023年第1期27-32,共6页
Non-coding RNAs are speculated to exert important regulatory functions at the level of gene expression,oncogenesis,and many other pathologies.Hepatitis B virus(HBV)infection is a leading cause of hepatocellular carcin... Non-coding RNAs are speculated to exert important regulatory functions at the level of gene expression,oncogenesis,and many other pathologies.Hepatitis B virus(HBV)infection is a leading cause of hepatocellular carcinoma(HCC),and some studies have shown that the expression of non-coding RNAs has an assignable effect on the development of HBV-induced HCC.In this context,the functions and molecular mechanisms of the HBVinduced non-coding RNA expression in the development of hepatoma have attracted increasing attention.This review covers the progress in the exploration of the relationship between HBV-induced hepatoma and non-coding RNA expression,cataloging the recent reports about the roles of non-coding RNAs in HBV-induced hepatoma into five classes,including(1)modulation of metabolism in hepatic cancer,(2)aggravation of inflammation and hepatic fibrosis,(3)alteration of the tumor immune microenvironment,(4)non-coding RNA N6-methyladenosine modification,and a seemingly opposite process,(5)the suppression of the progression of HBV-related HCC.All evidence supports non-coding RNAs as promising novel targets for the early diagnosis and treatments for HCC. 展开更多
关键词 non-coding rna Hepatitis B virus Hepatocellular cancer
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Non-coding RNAs:an emerging player in osteomyelitis
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作者 Cheng-Lin Sang Bing-Bing Li +3 位作者 Fang Liu Yong-Xian Zhang Zhen Qin Ji-Shun Yang 《Life Research》 2023年第4期27-33,共7页
Osteomyelitis is a debilitating bone infection primarily caused by Staphylococcus aureus.Despite advancements in surgery and chemotherapy,the treatment of osteomyelitis remains unsatisfactory,characterized by antibiot... Osteomyelitis is a debilitating bone infection primarily caused by Staphylococcus aureus.Despite advancements in surgery and chemotherapy,the treatment of osteomyelitis remains unsatisfactory,characterized by antibiotic resistance and recurrent relapses.Numerous studies have confirmed that non-coding RNAs could play an emerging role in regulating gene expression,as well as in the differentiation of osteoblasts and osteoclasts,along with bone formation.In this context,we provide an overview of current knowledge regarding the roles of non-coding RNAs in osteomyelitis and explore the potential therapeutic applications of these molecules in disease management,aiming to uncover novel diagnostic and treatment approaches. 展开更多
关键词 OSTEOMYELITIS non-coding rnas drug target BIOMARKER
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Bioinformatics Analysis and Experimental Verification of Prognostic and Biological Significance of Autophagy-Related Long Non-Coding RNAs in Gastric Carcinoma
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作者 Jiebang Jiang 《Proceedings of Anticancer Research》 2023年第1期15-29,共15页
Background:Long non-coding RNAs(lncRNAs)play a vital role in autophagy modulation and tumor progression.However,the key lncRNAs and their functions in gastric cancer(GC)remain largely unknown.Methods:A bioinformatic a... Background:Long non-coding RNAs(lncRNAs)play a vital role in autophagy modulation and tumor progression.However,the key lncRNAs and their functions in gastric cancer(GC)remain largely unknown.Methods:A bioinformatic analysis of GC patients’gene expression profiling data from the Cancer Genome Atlas database was performed to identify autophagy-related lncRNAs that are associated with predictive risk.Through Cox regression and Lasso regression analyses,the autophagy-related lncRNAs that are associated with prognosis were identified,and a novel prognostic model for GC was established.The model was then used to evaluate the clinical features and predictive risk of individuals with GC.By using two datasets,GSE 62254(n=300)and GSE 15459(n=192),from Gene Expression Omnibus,its effectiveness was verified.Gene set enrichment analysis according to hallmark and Kyoto Encyclopedia of Genes and Genomes were used to determine the possible biological roles of these lncRNAs.Furthermore,the HOXD antisense growth-associated long non-coding RNA(HAGLR)mechanism in GC was discovered through in vitro and in vivo experiments.Results:Six lncRNAs associated with autophagy in GC were identified,and a new prognostic risk model based on these lncRNAs was established.The six-lncRNA signature was significantly associated with adverse clinicopathological features and found to be an independent GC prognostic factor.The model was proven to be effective and robust by GSE62254 and GSE15459.According to gene set enrichment analysis,the six lncRNAs appeared to be tightly linked to autophagy-related and cancer-related mechanisms.HAGLR was also found to promote tumor growth by enhancing autophagy signaling in GC.Conclusion:A novel prognostic model integrating HAGLR that can effectively evaluate and predict the prognostic risk of GC patients was established.The results indicated that HAGLR promotes gastric cancer progression by enhancing autophagy and is anticipated to be a potential new target for the treatment of gastric cancer. 展开更多
关键词 Gastric cancer AUTOPHAGY Long non-coding rna Prognostic risk HAGLR
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The role of small non-coding RNAs(sncRNAs)in male infertility:A scoping review
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作者 Cakir Kaya Hacer Eroglu Onur 《Asian pacific Journal of Reproduction》 2023年第5期201-210,共10页
Objective:To give a brief overview of the field of epigenetics and the potential predictive power that small non-coding RNA(sncRNA)may hold in relation to improving the treatment and diagnosis of male infertility.Meth... Objective:To give a brief overview of the field of epigenetics and the potential predictive power that small non-coding RNA(sncRNA)may hold in relation to improving the treatment and diagnosis of male infertility.Methods:PRISMA-ScR was used as the scoping review guideline for this investigation.All article data here have been accessed from MEDLINE–PubMed,Science Direct,EBSCO,Scopus,Sage Journals,and Google Scholar.The terms"small non coding RNA,male,infertility,miRNA,sperm"were used in the search between 2015 and 2023.Results:The study comprised 35 publications in total.Several sncRNAs,miR-155,miR-16,miR-196,miR-525-3p,miR-891 were found to be effective in regulating the mechanism of spermatozoa processing in the infertility of men.sncRNA can be used as a biomarker of male infertility.Conclusions:sncRNAs can act as biomarkers for the diagnosis of reproductive diseases.Actually,by recognizing sncRNAs and their mechanisms,a new way to treat infertile men would be paved.The functional annotation of sncRNAs in spermatogenesis is still in its infancy but has enormous potential.This is despite the fact that many potential sncRNAs have been found to date with the use of cutting-edge technology and publicly accessible sncRNA annotation tools. 展开更多
关键词 Male infertility MIrna Small untranslated rna sncrnas SPERM Next-generation sequencing Real-time PCR
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基于铜死亡相关lncRNAs的胰腺癌预后模型构建与验证
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作者 黄菲菲 杨馨奕 +2 位作者 秦振溜 张杰 金约朋 《肝胆胰外科杂志》 CAS 2024年第6期348-359,共12页
目的研究铜死亡相关lncRNAs在胰腺癌(PAAD)患者中的预后预测价值,并进一步构建预后预测模型。方法从TCGA数据库中下载胰腺癌患者的转录组测序数据和相应临床信息,通过Pearson相关性分析筛选与预后相关的铜死亡相关lncRNAs,先后利用单因... 目的研究铜死亡相关lncRNAs在胰腺癌(PAAD)患者中的预后预测价值,并进一步构建预后预测模型。方法从TCGA数据库中下载胰腺癌患者的转录组测序数据和相应临床信息,通过Pearson相关性分析筛选与预后相关的铜死亡相关lncRNAs,先后利用单因素Cox回归和Lasso回归分析并进一步构建预后模型。根据模型的风险评分中位数,将所有患者分为高风险组和低风险组。通过Kaplan-Meier生存分析、亚组分析、ROC曲线分析及一致性指数分析评估模型的预后预测价值,并利用单因素和多因素回归分析验证模型的独立性。对高、低风险组的差异表达基因进行GO及KEGG功能富集分析,并对高、低风险组患者进行肿瘤突变负荷(TMB)分析、免疫治疗反应预测以及药物敏感性分析。结果通过Pearson相关性分析,确定了127个铜死亡相关的lncRNAs,先后利用单因素Cox回归分析及Lasso回归分析构建了一个基于6个铜死亡相关lncRNAs的预后预测模型。根据模型计算结果将PAAD患者队列分成高风险组和低风险组,Kaplan-Meier生存分析表明低风险组患者的生存时间要长于高风险组(P<0.05)。ROC曲线证明了该模型对胰腺癌患者预后的预测性能良好:1、3、5年ROC曲线下面积分别为0.687、0.753、0.771;基因功能富集分析表明,高、低风险组差异表达基因主要富集于免疫相关通路。此外,高风险组患者的TMB值明显大于低风险组,而TIDE评分明显低于低风险组。最后,通过药物敏感性分析发现不同组的胰腺癌患者对特定药物的敏感性存在统计学差异,对临床用药具有一定的指导意义。结论本研究基于铜死亡相关lncRNAs成功构建了一个PAAD患者预后模型,可精准预测PAAD患者的预后,并为患者的临床药物治疗选择提供个性化指导。 展开更多
关键词 胰腺癌 铜死亡 长链非编码rna(lncrnas) 预后模型 构建与验证
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snoRNAs在肝癌中潜在作用的研究进展
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作者 宋馨馨 汪旭 倪娟 《肿瘤防治研究》 CAS 2024年第4期284-289,共6页
核仁小RNA(snoRNAs)为核仁内存在的一类非编码RNA分子,主要负责rRNA的2′-O-甲基化和假尿嘧啶化修饰。此外,snoRNAs还在tRNA修饰、剪接体snRNA修饰、端粒结构维护及mRNA的可变剪接等生物过程中发挥调控作用。多项研究表明snoRNAs的表达... 核仁小RNA(snoRNAs)为核仁内存在的一类非编码RNA分子,主要负责rRNA的2′-O-甲基化和假尿嘧啶化修饰。此外,snoRNAs还在tRNA修饰、剪接体snRNA修饰、端粒结构维护及mRNA的可变剪接等生物过程中发挥调控作用。多项研究表明snoRNAs的表达异常与癌症的进展密切相关,可能成为癌症治疗的新靶点。同时,因其在体液中较稳定、易被检测,可作为临床中诊断和预后的生物标志物。本文综述了snoRNAs的合成、分类、结构和功能,并介绍其在肝癌发生和发展中的潜在作用。 展开更多
关键词 核仁小rna 肝癌 作用机制
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LncRNAs-MEG3对鼻咽癌细胞增殖、迁移及侵袭的影响
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作者 宁佳羽 朱忠寿 +1 位作者 魏日富 包伟晶 《现代肿瘤医学》 CAS 2024年第5期826-829,共4页
目的:研究长链非编码RNA母系表达基因3(LncRNAs-MEG3)对鼻咽癌细胞增殖、迁移和侵袭的影响,并探讨其可能机制。方法:体外培养鼻咽癌细胞系TW03、CNE-2,转染MEG3后分为空白对照组(NC)、阴性转染组(阴性对照质粒转染)和实验组(MEG3 mimis... 目的:研究长链非编码RNA母系表达基因3(LncRNAs-MEG3)对鼻咽癌细胞增殖、迁移和侵袭的影响,并探讨其可能机制。方法:体外培养鼻咽癌细胞系TW03、CNE-2,转染MEG3后分为空白对照组(NC)、阴性转染组(阴性对照质粒转染)和实验组(MEG3 mimis质粒转染)。采用实时定量PCR检测鼻咽癌细胞中LncRNAs-MEG3含量,CCK-8检测细胞增殖,Transwell检测细胞迁移和侵袭能力,流式细胞仪检测细胞凋亡情况。结果:与正常鼻咽上皮细胞系NP69相比,鼻咽癌细胞中MEG3的表达明显降低(0.62±0.04)(P<0.05)。与空白对照组、阴性转染组相比,实验组中MEG3 mRNA的表达升高(5.31±0.12)(F=441.062,P<0.01),同时检测到鼻咽癌细胞的增殖、迁移和侵袭均减少(F=10.832,P<0.05;F=1 534.134,P<0.05;F=1 430.212,P<0.05),凋亡增多(F=798.066,P<0.05),差异均有统计学意义(P均<0.05)。结论:MEG3在鼻咽癌中的表达降低,提高MEG3表达则能够抑制鼻咽癌细胞的增殖、迁移、侵袭能力,并促进细胞的凋亡,机制可能与抑制上皮-间质转化有关。 展开更多
关键词 鼻咽癌细胞 长链非编码rna 母系表达基因3 增殖 侵袭 凋亡
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血清lncRNAs ABHD11-AS1、miR-1231表达与胃癌根治术后复发转移及远期预后的相关性
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作者 石商双 周维 +4 位作者 刘茂华 蒋品 徐海平 刘悦 张琳 《河北医药》 CAS 2024年第16期2442-2445,2449,共5页
目的探究血清长链非编码RNAα/β水解酶域11反义RNA1(lncRNAs ABHD11-AS1)、微小RNA-1231(miR-1231)表达与胃癌根治术后复发转移及远期预后的相关性。方法选取2018年7月至2020年7月进行胃癌根治术治疗的147例患者(胃癌组),根据复发转移... 目的探究血清长链非编码RNAα/β水解酶域11反义RNA1(lncRNAs ABHD11-AS1)、微小RNA-1231(miR-1231)表达与胃癌根治术后复发转移及远期预后的相关性。方法选取2018年7月至2020年7月进行胃癌根治术治疗的147例患者(胃癌组),根据复发转移情况,将患者分为复发转移组48例和未复发转移组99例,根据3年预后情况,分为生存组40例和死亡组107例,选取同期体检的健康人员132例作为对照组,采用实时荧光定量PCR法测定血清lncRNAs ABHD11-AS1、miR-1231表达水平,采用Pearson法分析血清lncRNAs ABHD11-AS1、miR-1231的相关性,采用Logistic回归分析影响胃癌根治术后复发转移的因素。结果与对照组比较,胃癌组lncRNAs ABHD11-AS1表达水平显著升高(P<0.05),miR-1231表达水平显著降低(P<0.05)。血清lncRNAs ABHD11-AS1和miR-1231表达呈负相关(r=-0.691,P<0.05)。复发转移组肿瘤直径>5 cm、TNM分期Ⅲ+Ⅳ期、分化程度低分化、浸润深度T3+T4、有淋巴结转移的患者比例及lncRNAs ABHD11-AS1表达水平显著高于未复发转移组(P<0.05),miR-1231表达水平显著低于未复发转移患者,差异有统计学意义(P<0.05)。肿瘤直径、浸润深度、lncRNAs ABHD11-AS1是胃癌根治术后复发转移的独立危险因素,miR-1231是保护因素(P<0.05)。死亡组lncRNAs ABHD11-AS1表达水平显著高于生存组(P<0.05),miR-1231水平显著低于生存组(P<0.05)。结论胃癌患者血清中lncRNAs ABHD11-AS1表达水平升高,miR-1231表达水平降低,与胃癌根治术后复发转移及远期预后密切相关,可能作为胃癌根治术后复发转移及远期预后的标志物。 展开更多
关键词 胃癌根治术 长链非编码rnaα/β水解酶域11反义rna1 微小rna-1231 复发转移 远期预后
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