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优化的Native PAGE蛋白回收方法在AFM中的应用
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作者 刘美君 沈轶 Daniel M Czajkowsky 《基因组学与应用生物学》 CAS CSCD 北大核心 2019年第6期2706-2712,共7页
原子力显微镜(AFM)可以在生理条件下获得生物大分子的自然结构信息而不需要进行图像处理。虽然对含有大小范围不一的异质样品成像可以得到几纳米的分辨率,但是具有更高的亚纳米级分辨率的图像仅可以从含有单一亚基数目的高度均一的蛋白... 原子力显微镜(AFM)可以在生理条件下获得生物大分子的自然结构信息而不需要进行图像处理。虽然对含有大小范围不一的异质样品成像可以得到几纳米的分辨率,但是具有更高的亚纳米级分辨率的图像仅可以从含有单一亚基数目的高度均一的蛋白复合物获得。在重组蛋白的制备中这种蛋白复合物经常不存在,尤其是对于膜蛋白则更具有挑战性。本研究中,研究者以一种熟知的膜成孔蛋白复合物Perfringolysin O(PFO)作为模型系统,研制出一种方法来分离含有单一亚基数目的复合物,并用于随后在液相的AFM成像。具体而言,研究人员通过非变性聚丙烯酰胺凝胶电泳(Native PAGE)分离出该复合物中特定大小的蛋白成分,然后提取时采用一种新方法使结构完整保持。预计这种方法不仅对更多其他蛋白的高分辨率AFM研究有效用,而且在基于单分子方法和生物技术应用的研究上有更普遍的用途。 展开更多
关键词 原子力显微镜(AFM) perfringolysin O (PFO) 蛋白回收
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Novel Experimental Strategy for High Resolution AFM Imaging of Membrane-Associated Bacterial Toxins
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作者 罗梦麟 邵志峰 +2 位作者 沈轶 CZAJKOWSKY Daniel M 孙洁林 《Journal of Shanghai Jiaotong university(Science)》 EI 2014年第5期569-573,共5页
Bacterial pore-forming toxins(PFTs) are essential virulence factors of many human pathogens. Knowledge of their structure within the membrane is critical for an understanding of their function in pathogenesis and for ... Bacterial pore-forming toxins(PFTs) are essential virulence factors of many human pathogens. Knowledge of their structure within the membrane is critical for an understanding of their function in pathogenesis and for the development of useful therapy. Atomic force microscopy(AFM) has often been employed to structurally interrogate many membrane proteins, including PFTs, owing to its ability to produce sub-nanometer resolution images of samples under aqueous solution. However, an absolute prerequisite for AFM studies is that the samples are single-layered and closely-packed, which is frequently challenging with PFTs. Here, using the prototypical member of the cholesterol-dependent cytolysin family of PFTs, perfringolysin O(PFO), as a test sample, we have developed a simple, highly robust method that routinely produces clean, closely-packed samples across the entire specimen surface. In this approach, we first use a small Teflon well to prepare the supported lipid bilayer, remove the sample from the well, and then directly apply the proteins to the bilayer. For reasons that are not clear,bilayer preparation in the Teflon well is essential. We anticipate that this simple method will prove widely useful for the preparation of similar samples, and thereby enable AFM imaging of the greatest range of bacterial PFTs to the highest possible resolution. 展开更多
关键词 atomic force microscopy(AFM) perfringolysin O(PFO) bacterial pore forming toxins(PFTs) supported lipid bilayers
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