[Objective] This paper aimed at revealing the rules of phenotypic variation of Leymus chinensis in Zhalong wetlands and providing the scientific and theoretical bases for devising protection strategies of Leymus chine...[Objective] This paper aimed at revealing the rules of phenotypic variation of Leymus chinensis in Zhalong wetlands and providing the scientific and theoretical bases for devising protection strategies of Leymus chinensis populations in Zhalong National Nature Reserve.[Method] Four phenotypic traits of five Leymus chinensis populations in Zhalong Wetlands were comparison and analysis using principal component analysis method and UPGMA cluster analysis method.[Result] There were significant differences among the four phenotypic traits of five populations,the order of coefficients of variation were node number〉plant height〉leaf width〉leaf length;the order of variation degrees of the populations from large to small was KQH,MD,JZ,ZK,TTG population.Results of principal component analysis suggested that the four traits were all factors led to the phenotypic differences among the populations of Leymus chinensis.Leymus chinensis of five populations were divided into three groups by cluster analysis,MD,JZ and TTG were classified as one group,KQH and ZK population were individually classified as one group.[Conclusion] Leymus chinensis had large-scale phenotypic variations and showed strong adaptability to different habitats,which was very important for selection,breeding of fine varieties and germplasm conservation.展开更多
Ecosystem stays far from thermodynamic equilibrium. Through the interactions among biotic and abiotic components, and encompassing physical environments, ecosystem forms a dissipative struc- ture that allows it to dis...Ecosystem stays far from thermodynamic equilibrium. Through the interactions among biotic and abiotic components, and encompassing physical environments, ecosystem forms a dissipative struc- ture that allows it to dissipate energy continuously and thereby remains functional over time. Biotic regulation of energy and material fluxes in and out of the ecosystem allows it to maintain a homeostatic state which corresponds to a self-organized state emerged in a non-equilibrium thermodynamic system. While the associated self-organizational processes approach to homeostatic state, entropy (a measure of irre- versibility) degrades and dissipation of energy increases. We propose here that at a homeostatic state of ecosystem, biodiversity which includes both phenotypic and functional diversity, attains optimal values. As long as biodiversity remains within its optimal range, the corresponding homeostatic state is maintained. However, while embedded environmental conditions fluctuate along the gradient of accelerating changes, phenotypic diversity and functional diversity contribute inversely to the associated self-organizing proc- esses. Furthermore, an increase or decrease in biodiversity outside of its optimal range makes the eco- system vulnerable to transition into a different state.展开更多
Drought susceptibility and low genetic variability are the major constraints of lentil(Lens culinaris Medik.)production worldwide.Development of an efficient pre-field drought phenotyping technique and identification ...Drought susceptibility and low genetic variability are the major constraints of lentil(Lens culinaris Medik.)production worldwide.Development of an efficient pre-field drought phenotyping technique and identification of diversified drought tolerant lentil genotype(s)are therefore vital and necessary.Two separate experiments were conducted using thirty diverse lentil genotypes to isolate drought tolerant genotype(s)as well as to assess their diversity.In both of the experiments,significant(p≤0.01)variation in genotype(G),treatment(T)and G X T was observed for most of the studied traits.In experiment I,genotypes were examined for drought tolerance at the seedlings stage under hydroponic conditions by assessing root and shoot traits.Among the 30 genotypes studied,BM-1247,BM-1227 and BM-502 were selected as highly tolerant to drought stress as they showed maximum seedling survivability and minimum reduction in growth parameters under drought stress.In experiment II,the genotypes were assayed for diversity and drought stress tolerance based on morphological traits grown under field condition.Drought stress caused a substantial reduction in yield attributing traits,however,the genotypes BM-1247,BM-981,BM-1227 and BM-502 were categorized as drought tolerant genotypes with less than 20%yield reduction.The field screening result of drought stress tolerance was coincided well with the results of laboratory screening.Genetic divergence study reflected the presence of considerable diversity among the genotypes.Considering laboratory and field screening results,the genotypes,BM-1247,BM-1227,BM-981 and BM-502 were selected as the best drought tolerant genotypes.This information can be exploited for further breeding in developing drought tolerance in lentil.展开更多
AIM:To describe the clinical characteristics with genetic lesions in a Chinese family with Crouzon syndrome. METHODS: All five patients from this family were included and received comprehensive ophthalmic and system...AIM:To describe the clinical characteristics with genetic lesions in a Chinese family with Crouzon syndrome. METHODS: All five patients from this family were included and received comprehensive ophthalmic and systemic examinations.Direct sequencing of the FGFR2 gene was employed for mutation identification.Crystal structure analysis was applied to analyze the structural changes associated with the substitution. RESULTS: All patients presented typical Crouzon features,including short stature,craniosynostosis,mandibular prognathism,shallow orbits with proptosis,and exotropia.Intrafamilial phenotypic diversities were observed.Atrophic optic nerves were exclusively detected in the proband and her son.Cranial magnetic resonance imaging implied a cystic lesion in her sellar and third ventricular regions.A missense mutation,FGFR2 p.Cys342 Trp,was found as disease causative.This substitution would generate conformational changes in the extracellular Ig-III domain of the FGFR-2 protein,thus altering its physical and biological properties.CONCLUSION: We describe the clinical presentations and genotypic lesions in a Chinese family with Crouzon syndrome.The intrafamilial phenotypic varieties in this family suggest that other genetic modifiers may also play a role in the pathogenesis of Crouzon syndrome.展开更多
Color polymorphism offers rich opportunities for studying the eco-evolutionary mechanisms that drive the adaptations of local populations to heterogeneous and changing environments.We explored the color morph diversit...Color polymorphism offers rich opportunities for studying the eco-evolutionary mechanisms that drive the adaptations of local populations to heterogeneous and changing environments.We explored the color morph diversity and composition in a Chrysomela lapponica leaf beetle across its entire distribution range to test the hypothesis that environmental and climatic variables shape spatiotemporal variation in the phenotypic structure of a polymorphic species.We obtained information on 13617 specimens of this beetle from museums,private collections,and websites.These specimens(collected from 1830-2020)originated from 959 localities spanning 33°latitude,178°longitude,and 4200 m altitude.We classified the beetles into five color morphs and searched for environmental factors that could explain the variation in the level of polymorphism(quantified by the Shannon diversity index)and in the relative frequencies of individual color morphs.The highest level of polymorphism was found at high latitudes and altitudes.The color morphs differed in their climatic requirements;composition of colour morphs was independent of the geographic distance that separated populations but changed with collection year,longitude,mean July temperature and betweenyear temperature fluctuations.The proportion of melanic beetles,in line with the thermal melanism hypothesis,increased with increasing latitude and altitude and decreased with increasing climate seasonality.Melanic morph frequencies also declined during the past century,but only at high latitudes and altitudes where recent climate warming was especially strong.The observed patterns suggest that color polymorphism is especially advantageous for populations inhabiting unpredictable environments,presumably due to the different climatic requirements of coexisting color morphs.展开更多
Selective pressures favor morphologies that are adapted to distinct ecologies,resulting in trait partition!ng among ecomorphotypes.However,the effects of these selective pressures vary across taxa,especially because m...Selective pressures favor morphologies that are adapted to distinct ecologies,resulting in trait partition!ng among ecomorphotypes.However,the effects of these selective pressures vary across taxa,especially because morphology is also influenced by factors such as phylogeny,body size,and functional trade-offs.In this study,we examine how these factors impact functional diversification in mammals.It has been proposed that trait partitioning among mammalian ecomorphotypes is less pronoun ced at small body sizes due to biomecha nical,energetic,and environ mental factors that favor a"generalist"body plan,whereas larger taxa exhibit more substantial functional adaptations.We title this the Diverge nee Hypothesis(DH)because it predicts greater morphological divergence among ecomorphotypes at larger body sizes.We test DH by using phylogenetic comparative methods to examine the postcranial skeletons of 129 species of taxonomically diverse,small-tomedium-sized(<15 kg)mammals,which we categorize as either"tree-dwellers"or"ground-dwellers."In some analyses,the morphologies of ground-dwellers and tree-dwellers suggest greater between-group differentiation at larger sizes,providing some evidence for DH.However,this trend is n either particularly strong nor supported by all an alyses.In stead,a more pronoun ced patter n emerges that is distinct from the predictions of DH:within-group phenotypic disparity increases with body size in both ground-dwellers and tree-dwellers,driven by morphological outliers among"medium'-sized mammals.Thus,evolutionary increases in body size are more closely linked to increases in within-locomotor-group disparity tha n to in creases in betwee n-group disparity.We discuss biomechanical and ecological factors that may drive these evolutionary patter ns,and we emphasize the significant evolutionary influences of ecology and body size on phenotypic diversity.展开更多
Immunotherapy has revolutionized cancer treatment and rejuvenated the field of tumor immunology.Several types of immunotherapy,including adoptive cell transfer(ACT)and immune checkpoint inhibitors(ICIs),have obtained ...Immunotherapy has revolutionized cancer treatment and rejuvenated the field of tumor immunology.Several types of immunotherapy,including adoptive cell transfer(ACT)and immune checkpoint inhibitors(ICIs),have obtained durable clinical responses,but their efficacies vary,and only subsets of cancer patients can benefit from them.Immune infiltrates in the tumor microenvironment(TME)have been shown to play a key role in tumor development and will affect the clinical outcomes of cancer patients.Comprehensive profiling of tumor-infiltrating immune cells would shed light on the mechanisms of cancer–immune evasion,thus providing opportunities for the development of novel therapeutic strategies.However,the highly heterogeneous and dynamic nature of the TME impedes the precise dissection of intratumoral immune cells.With recent advances in single-cell technologies such as single-cell RNA sequencing(scRNA-seq)and mass cytometry,systematic interrogation of the TME is feasible and will provide insights into the functional diversities of tumor-infiltrating immune cells.In this review,we outline the recent progress in cancer immunotherapy,particularly by focusing on landmark studies and the recent single-cell characterization of tumor-associated immune cells,and we summarize the phenotypic diversities of intratumoral immune cells and their connections with cancer immunotherapy.We believe such a review could strengthen our understanding of the progress in cancer immunotherapy,facilitate the elucidation of immune cell modulation in tumor progression,and thus guide the development of novel immunotherapies for cancer treatment.展开更多
基金Supported by National Natural Science Foundation of China(40971053)~~
文摘[Objective] This paper aimed at revealing the rules of phenotypic variation of Leymus chinensis in Zhalong wetlands and providing the scientific and theoretical bases for devising protection strategies of Leymus chinensis populations in Zhalong National Nature Reserve.[Method] Four phenotypic traits of five Leymus chinensis populations in Zhalong Wetlands were comparison and analysis using principal component analysis method and UPGMA cluster analysis method.[Result] There were significant differences among the four phenotypic traits of five populations,the order of coefficients of variation were node number〉plant height〉leaf width〉leaf length;the order of variation degrees of the populations from large to small was KQH,MD,JZ,ZK,TTG population.Results of principal component analysis suggested that the four traits were all factors led to the phenotypic differences among the populations of Leymus chinensis.Leymus chinensis of five populations were divided into three groups by cluster analysis,MD,JZ and TTG were classified as one group,KQH and ZK population were individually classified as one group.[Conclusion] Leymus chinensis had large-scale phenotypic variations and showed strong adaptability to different habitats,which was very important for selection,breeding of fine varieties and germplasm conservation.
基金supported by the U.S. National Science Foundation's Biocomplexity Program (DEB-0421530)Long-Term Ecological Research Program (Sevilleta LTER,DEB-0620482)
文摘Ecosystem stays far from thermodynamic equilibrium. Through the interactions among biotic and abiotic components, and encompassing physical environments, ecosystem forms a dissipative struc- ture that allows it to dissipate energy continuously and thereby remains functional over time. Biotic regulation of energy and material fluxes in and out of the ecosystem allows it to maintain a homeostatic state which corresponds to a self-organized state emerged in a non-equilibrium thermodynamic system. While the associated self-organizational processes approach to homeostatic state, entropy (a measure of irre- versibility) degrades and dissipation of energy increases. We propose here that at a homeostatic state of ecosystem, biodiversity which includes both phenotypic and functional diversity, attains optimal values. As long as biodiversity remains within its optimal range, the corresponding homeostatic state is maintained. However, while embedded environmental conditions fluctuate along the gradient of accelerating changes, phenotypic diversity and functional diversity contribute inversely to the associated self-organizing proc- esses. Furthermore, an increase or decrease in biodiversity outside of its optimal range makes the eco- system vulnerable to transition into a different state.
基金This project was funded by the Ministry of Education,Government of the People’s Republic of Bangladesh(Grant No.2018/518/MOE).
文摘Drought susceptibility and low genetic variability are the major constraints of lentil(Lens culinaris Medik.)production worldwide.Development of an efficient pre-field drought phenotyping technique and identification of diversified drought tolerant lentil genotype(s)are therefore vital and necessary.Two separate experiments were conducted using thirty diverse lentil genotypes to isolate drought tolerant genotype(s)as well as to assess their diversity.In both of the experiments,significant(p≤0.01)variation in genotype(G),treatment(T)and G X T was observed for most of the studied traits.In experiment I,genotypes were examined for drought tolerance at the seedlings stage under hydroponic conditions by assessing root and shoot traits.Among the 30 genotypes studied,BM-1247,BM-1227 and BM-502 were selected as highly tolerant to drought stress as they showed maximum seedling survivability and minimum reduction in growth parameters under drought stress.In experiment II,the genotypes were assayed for diversity and drought stress tolerance based on morphological traits grown under field condition.Drought stress caused a substantial reduction in yield attributing traits,however,the genotypes BM-1247,BM-981,BM-1227 and BM-502 were categorized as drought tolerant genotypes with less than 20%yield reduction.The field screening result of drought stress tolerance was coincided well with the results of laboratory screening.Genetic divergence study reflected the presence of considerable diversity among the genotypes.Considering laboratory and field screening results,the genotypes,BM-1247,BM-1227,BM-981 and BM-502 were selected as the best drought tolerant genotypes.This information can be exploited for further breeding in developing drought tolerance in lentil.
基金Supported by National Key Basic Research Program of China(No.2013CB967500)National Natural Science Foundation of China(No.81525006+4 种基金No.81670864No.81260154No.81460093)Jiangsu Province's Innovation TeamA Project Funded by the Priority Academic Program Development of Jiangsu Higher Education Institutions(PAPD)
文摘AIM:To describe the clinical characteristics with genetic lesions in a Chinese family with Crouzon syndrome. METHODS: All five patients from this family were included and received comprehensive ophthalmic and systemic examinations.Direct sequencing of the FGFR2 gene was employed for mutation identification.Crystal structure analysis was applied to analyze the structural changes associated with the substitution. RESULTS: All patients presented typical Crouzon features,including short stature,craniosynostosis,mandibular prognathism,shallow orbits with proptosis,and exotropia.Intrafamilial phenotypic diversities were observed.Atrophic optic nerves were exclusively detected in the proband and her son.Cranial magnetic resonance imaging implied a cystic lesion in her sellar and third ventricular regions.A missense mutation,FGFR2 p.Cys342 Trp,was found as disease causative.This substitution would generate conformational changes in the extracellular Ig-III domain of the FGFR-2 protein,thus altering its physical and biological properties.CONCLUSION: We describe the clinical presentations and genotypic lesions in a Chinese family with Crouzon syndrome.The intrafamilial phenotypic varieties in this family suggest that other genetic modifiers may also play a role in the pathogenesis of Crouzon syndrome.
基金Collection of the substantial part of the data and the completion of the study were supported by the Academy of Finland(projects 122133,122144,122180,127047,203156,208016,214653,268124,276671,311929,and 316182)L.S.was supported by the Ministry of Culture of the Czech Republic(DKRVO 2019-2023/5.1.b,National Museum,00023272)+1 种基金V.L.was supported by the Czech Academy of Sciences(RVO 679859939)Z.O.was supported by the Erasmus+programme of the European Union.
文摘Color polymorphism offers rich opportunities for studying the eco-evolutionary mechanisms that drive the adaptations of local populations to heterogeneous and changing environments.We explored the color morph diversity and composition in a Chrysomela lapponica leaf beetle across its entire distribution range to test the hypothesis that environmental and climatic variables shape spatiotemporal variation in the phenotypic structure of a polymorphic species.We obtained information on 13617 specimens of this beetle from museums,private collections,and websites.These specimens(collected from 1830-2020)originated from 959 localities spanning 33°latitude,178°longitude,and 4200 m altitude.We classified the beetles into five color morphs and searched for environmental factors that could explain the variation in the level of polymorphism(quantified by the Shannon diversity index)and in the relative frequencies of individual color morphs.The highest level of polymorphism was found at high latitudes and altitudes.The color morphs differed in their climatic requirements;composition of colour morphs was independent of the geographic distance that separated populations but changed with collection year,longitude,mean July temperature and betweenyear temperature fluctuations.The proportion of melanic beetles,in line with the thermal melanism hypothesis,increased with increasing latitude and altitude and decreased with increasing climate seasonality.Melanic morph frequencies also declined during the past century,but only at high latitudes and altitudes where recent climate warming was especially strong.The observed patterns suggest that color polymorphism is especially advantageous for populations inhabiting unpredictable environments,presumably due to the different climatic requirements of coexisting color morphs.
基金the National Science Foundation Graduate Research Fellowship,UW BiologyBurke Museumthe National Science Foundation Postdoctoral Research Fellowship in Biology(DBI-1812126).
文摘Selective pressures favor morphologies that are adapted to distinct ecologies,resulting in trait partition!ng among ecomorphotypes.However,the effects of these selective pressures vary across taxa,especially because morphology is also influenced by factors such as phylogeny,body size,and functional trade-offs.In this study,we examine how these factors impact functional diversification in mammals.It has been proposed that trait partitioning among mammalian ecomorphotypes is less pronoun ced at small body sizes due to biomecha nical,energetic,and environ mental factors that favor a"generalist"body plan,whereas larger taxa exhibit more substantial functional adaptations.We title this the Diverge nee Hypothesis(DH)because it predicts greater morphological divergence among ecomorphotypes at larger body sizes.We test DH by using phylogenetic comparative methods to examine the postcranial skeletons of 129 species of taxonomically diverse,small-tomedium-sized(<15 kg)mammals,which we categorize as either"tree-dwellers"or"ground-dwellers."In some analyses,the morphologies of ground-dwellers and tree-dwellers suggest greater between-group differentiation at larger sizes,providing some evidence for DH.However,this trend is n either particularly strong nor supported by all an alyses.In stead,a more pronoun ced patter n emerges that is distinct from the predictions of DH:within-group phenotypic disparity increases with body size in both ground-dwellers and tree-dwellers,driven by morphological outliers among"medium'-sized mammals.Thus,evolutionary increases in body size are more closely linked to increases in within-locomotor-group disparity tha n to in creases in betwee n-group disparity.We discuss biomechanical and ecological factors that may drive these evolutionary patter ns,and we emphasize the significant evolutionary influences of ecology and body size on phenotypic diversity.
基金This work was supported by grants from the Beijing Advanced Innovation Center for Genomics at Peking University,Key Technologies R&D Program(2016YFC0900100 and 2016YFC0902300)the National Natural Science Foundation of China(31530036 and 91742203).
文摘Immunotherapy has revolutionized cancer treatment and rejuvenated the field of tumor immunology.Several types of immunotherapy,including adoptive cell transfer(ACT)and immune checkpoint inhibitors(ICIs),have obtained durable clinical responses,but their efficacies vary,and only subsets of cancer patients can benefit from them.Immune infiltrates in the tumor microenvironment(TME)have been shown to play a key role in tumor development and will affect the clinical outcomes of cancer patients.Comprehensive profiling of tumor-infiltrating immune cells would shed light on the mechanisms of cancer–immune evasion,thus providing opportunities for the development of novel therapeutic strategies.However,the highly heterogeneous and dynamic nature of the TME impedes the precise dissection of intratumoral immune cells.With recent advances in single-cell technologies such as single-cell RNA sequencing(scRNA-seq)and mass cytometry,systematic interrogation of the TME is feasible and will provide insights into the functional diversities of tumor-infiltrating immune cells.In this review,we outline the recent progress in cancer immunotherapy,particularly by focusing on landmark studies and the recent single-cell characterization of tumor-associated immune cells,and we summarize the phenotypic diversities of intratumoral immune cells and their connections with cancer immunotherapy.We believe such a review could strengthen our understanding of the progress in cancer immunotherapy,facilitate the elucidation of immune cell modulation in tumor progression,and thus guide the development of novel immunotherapies for cancer treatment.