The Motif Tracking Algorithm

The search for patterns or motifs in data represents a problem area of key interest to finance and economic researchers. In this paper, we introduce the motif tracking algorithm （MTA）, a novel immune inspired （IS） pattern identification tool that is able to identify unknown motifs of a non specified length which repeat within time series data. The power of the algorithm comes from the fact that it uses a small number of parameters with minimal assumptions regarding the data being examined or the underlying motifs. Our interest lies in applying the algorithm to financial time series data to identify unknown patterns that exist. The algorithm is tested using three separate data sets. Particular suitability to financial data is shown by applying it to oil price data. In all cases, the algorithm identifies the presence of a motif population in a fast and efficient manner due to the utilization of an intuitive symbolic representation. The resulting population of motifs is shown to have considerable potential value for other applications such as forecasting and algorithm seeding.

Deep image retrieval using artificial neural network interpolation and indexing based on similarity measurement

In content-based image retrieval(CBIR),primitive image signatures are critical because they represent the visual characteristics.Image signatures,which are algorithmically descriptive and accurately recognized visual components,are used to appropriately index and retrieve comparable results.To differentiate an image in the category of qualifying contender,feature vectors must have image information's like colour,objects,shape,spatial viewpoints.Previous methods such as sketch-based image retrieval by salient contour(SBIR)and greedy learning of deep Boltzmann machine(GDBM)used spatial information to distinguish between image categories.This requires interest points and also feature analysis emerged image detection problems.Thus,a proposed model to overcome this issue and predict the repeating pattern as well as series of pixels that conclude similarity has been necessary.In this study,a technique called CBIR-similarity measure via artificial neural network interpolation(CBIR-SMANN)has been presented.By collecting datasets,the images are resized then subject to Gaussian filtering in the pre-processing stage,then by permitting them to the Hessian detector,the interesting points are gathered.Based on Skewness,mean,kurtosis and standard deviation features were extracted then given to ANN for interpolation.Interpolated results are stored in a database for retrieval.In the testing stage,the query image was inputted that is subjected to pre-processing,and feature extraction was then fed to the similarity measurement function.Thus,ANN helps to get similar images from the database.CBIR-SMANN have been implemented in the python tool and then evaluated for its performance.Results show that CBIR-SMANN exhibited a high recall value of 78%with a minimum retrieval time of 980 ms.This showed the supremacy of the proposed model was comparatively greater than the previous ones.

Hidden Sequence Repeats: Additional Evidence for the Origin of TIM-Barrel Family

Most proteins adopt an approximate structural symmetry. However, they have no symmetry detectable in their sequences and it is unclear for most of these proteins whether their structural symmetry originates from duplication. As one of the six popular folds (super-folds) possessing an approximate structural symmetry, the triosephosphate isomerase barrel (TIM-barrel) domain has been widely studied. Using modified recurrent quantification analysis of primary sequences, we identified the same 2-, 3-, and 4-fold symmetry pattern as their tertiary structures. This result indicates that the symmetry in tertiary structure is coded by symmetry in the primary sequence and that the TIM-barrel adopts a 2-, 3-, or 4-fold repeat pattern during evolution. This discovery will be useful for understanding the evolutionary mechanisms of this protein family and the symmetry pattern that may be a clue into the ancient origin of duplication of half-barrels or the β a unit.