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Screening biomarkers for spinal cord injury using weighted gene co-expression network analysis and machine learning 被引量:5
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作者 Xiaolu Li Ye Yang +3 位作者 Senming Xu Yuchang Gui Jianmin Chen Jianwen Xu 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第12期2723-2734,共12页
Immune changes and inflammatory responses have been identified as central events in the pathological process of spinal co rd injury.They can greatly affect nerve regeneration and functional recovery.However,there is s... Immune changes and inflammatory responses have been identified as central events in the pathological process of spinal co rd injury.They can greatly affect nerve regeneration and functional recovery.However,there is still limited understanding of the peripheral immune inflammato ry response in spinal cord inju ry.In this study.we obtained microRNA expression profiles from the peripheral blood of patients with spinal co rd injury using high-throughput sequencing.We also obtained the mRNA expression profile of spinal cord injury patients from the Gene Expression Omnibus(GEO)database(GSE151371).We identified 54 differentially expressed microRNAs and 1656 diffe rentially expressed genes using bioinformatics approaches.Functional enrichment analysis revealed that various common immune and inflammation-related signaling pathways,such as neutrophil extracellular trap formation pathway,T cell receptor signaling pathway,and nuclear factor-κB signal pathway,we re abnormally activated or inhibited in spinal cord inju ry patient samples.We applied an integrated strategy that combines weighted gene co-expression network analysis,LASSO logistic regression,and SVM-RFE algorithm and identified three biomarke rs associated with spinal cord injury:ANO10,BST1,and ZFP36L2.We verified the expression levels and diagnostic perfo rmance of these three genes in the original training dataset and clinical samples through the receiver operating characteristic curve.Quantitative polymerase chain reaction results showed that ANO20 and BST1 mRNA levels were increased and ZFP36L2 mRNA was decreased in the peripheral blood of spinal cord injury patients.We also constructed a small RNA-mRNA interaction network using Cytoscape.Additionally,we evaluated the proportion of 22 types of immune cells in the peripheral blood of spinal co rd injury patients using the CIBERSORT tool.The proportions of naive B cells,plasma cells,monocytes,and neutrophils were increased while the proportions of memory B cells,CD8^(+)T cells,resting natural killer cells,resting dendritic cells,and eosinophils were markedly decreased in spinal cord injury patients increased compared with healthy subjects,and ANO10,BST1 and ZFP26L2we re closely related to the proportion of certain immune cell types.The findings from this study provide new directions for the development of treatment strategies related to immune inflammation in spinal co rd inju ry and suggest that ANO10,BST2,and ZFP36L2 are potential biomarkers for spinal cord injury.The study was registe red in the Chinese Clinical Trial Registry(registration No.ChiCTR2200066985,December 12,2022). 展开更多
关键词 bioinformatics analysis BIOMARKER CIBERSORT GEO dataset LASSO miRNA-mRNA network RNA sequencing spinal cord injury SVM-RFE weighted gene co-expression network analysis
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Social-ecological perspective on the suicidal behaviour factors of early adolescents in China:a network analysis 被引量:4
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作者 Yuan Li Peiying Li +5 位作者 Mengyuan Yuan Yonghan Li Xueying Zhang Juan Chen Gengfu Wang Puyu Su 《General Psychiatry》 CSCD 2024年第1期143-150,共8页
Background In early adolescence,youth are highly prone to suicidal behaviours.Identifying modifiable risk factors during this critical phase is a priority to inform effective suicide prevention strategies.Aims To expl... Background In early adolescence,youth are highly prone to suicidal behaviours.Identifying modifiable risk factors during this critical phase is a priority to inform effective suicide prevention strategies.Aims To explore the risk and protective factors of suicidal behaviours(ie,suicidal ideation,plans and attempts)in early adolescence in China using a social-ecological perspective.Methods Using data from the cross-sectional project‘Healthy and Risky Behaviours Among Middle School Students in Anhui Province,China',stratified random cluster sampling was used to select 5724 middle school students who had completed self-report questionnaires in November 2020.Network analysis was employed to examine the correlates of suicidal ideation,plans and attempts at four levels,namely individual(sex,academic performance,serious physical llness/disability,history of self-harm,depression,impulsivity,sleep problems,resilience),family(family economic status,relationship with mother,relationship with father,family violence,childhood abuse,parental mental illness),school(relationship with teachers,relationship with classmates,school-bullying victimisation and perpetration)and social(social support,satisfaction with society).Results In total,37.9%,19.0%and 5.5%of the students reported suicidal ideation,plans and attempts in the past 6 months,respectively.The estimated network revealed that suicidal ideation,plans and attempts were collectively associated with a history of self-harm,sleep problems,childhood abuse,school bullying and victimisation.Centrality analysis indicated that the most influential nodes in the network were history of self-harm and childhood abuse.Notably,the network also showed unique correlates of suicidal ideation(sex,weight=0.60;impulsivity,weight=0.24;family violence,weight=0.17;relationship with teachers,weight=-0.03;school-bullying perpetration,weight=0.22),suicidal plans(social support,weight=-0.15)and suicidal attempts(relationship with mother,weight=-0.10;parental mental llness,weight=0.61).Conclusions This study identified the correlates of suicidal ideation,plans and attempts,and provided practical implications for suicide prevention for young adolescents in China.Firstly,this study highlighted the importance of joint interventions across multiple departments.Secondly,the common risk factors of suicidal ideation,plans and attempts were elucidated.Thirdly,this study proposed target interventions to address the unique influencing factors of suicidal ideation,plans and attempts. 展开更多
关键词 network analysis PREVENTION
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Citation and bibliographic coupling between authors in the field of social network analysis
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作者 Daria Maltseva Vladimir Batagelj 《Journal of Data and Information Science》 CSCD 2024年第4期110-154,共45页
Purpose:We analyzed the structure of a community of authors working in the field of social network analysis(SNA)based on citation indicators:direct citation and bibliographic coupling metrics.We observed patterns at t... Purpose:We analyzed the structure of a community of authors working in the field of social network analysis(SNA)based on citation indicators:direct citation and bibliographic coupling metrics.We observed patterns at the micro,meso,and macro levels of analysis.Design/methodology/approach:We used bibliometric network analysis,including the“temporal quantities”approach proposed to study temporal networks.Using a two-mode network linking publications with authors and a one-mode network of citations between the works,we constructed and analyzed the networks of citation and bibliographic coupling among authors.We used an iterated saturation data collection approach.Findings:At the macro-level,we observed the global structural features of citations between authors,showing that 80%of authors have not more than 15 citations from other works.At the meso-level,we extracted the groups of authors citing each other and similar to each other according to their citation patterns.We have seen a division of authors in SNA into groups of social scientists and physicists,as well as into other groups of authors from different disciplines.We found some examples of brokerage between different groups that maintained the common identity of the field.At the micro-level,we extracted authors with extremely high values of received citations,who can be considered as the most prominent authors in the field.We examined the temporal properties of the most popular authors.Research limitations:The main challenge in this approach is the resolution of the author’s name(synonyms and homonyms).We faced the author disambiguation,or“multiple personalities”(Harzing,2015)problem.To remain consistent and comparable with our previously published articles,we used the same SNA data collected up to 2018.The analysis and conclusions on the activity,productivity,and visibility of the authors are relative only to the field of SNA.Practical implications:The proposed approach can be utilized for similar objectives and identifying key structures and characteristics in other disciplines.This may potentially inspire the application of network approaches in other research areas,creating more authors collaborating in the field of SNA.Originality/value:We identified and applied an innovative approach and methods to study the structure of scientific communities,which allowed us to get the findings going beyond those obtained with other methods.We used a new approach to temporal network analysis,which is an important addition to the analysis as it provides detailed information on different measures for the authors and pairs of authors over time. 展开更多
关键词 Development of scientific fields Social network analysis Bibliographic network Temporal network CITATION Bibliographic coupling
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Geometric prior guided hybrid deep neural network for facial beauty analysis
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作者 Tianhao Peng Mu Li +2 位作者 Fangmei Chen Yong Xu David Zhang 《CAAI Transactions on Intelligence Technology》 SCIE EI 2024年第2期467-480,共14页
Facial beauty analysis is an important topic in human society.It may be used as a guidance for face beautification applications such as cosmetic surgery.Deep neural networks(DNNs)have recently been adopted for facial ... Facial beauty analysis is an important topic in human society.It may be used as a guidance for face beautification applications such as cosmetic surgery.Deep neural networks(DNNs)have recently been adopted for facial beauty analysis and have achieved remarkable performance.However,most existing DNN-based models regard facial beauty analysis as a normal classification task.They ignore important prior knowledge in traditional machine learning models which illustrate the significant contribution of the geometric features in facial beauty analysis.To be specific,landmarks of the whole face and facial organs are introduced to extract geometric features to make the decision.Inspired by this,we introduce a novel dual-branch network for facial beauty analysis:one branch takes the Swin Transformer as the backbone to model the full face and global patterns,and another branch focuses on the masked facial organs with the residual network to model the local patterns of certain facial parts.Additionally,the designed multi-scale feature fusion module can further facilitate our network to learn complementary semantic information between the two branches.In model optimisation,we propose a hybrid loss function,where especially geometric regulation is introduced by regressing the facial landmarks and it can force the extracted features to convey facial geometric features.Experiments performed on the SCUT-FBP5500 dataset and the SCUT-FBP dataset demonstrate that our model outperforms the state-of-the-art convolutional neural networks models,which proves the effectiveness of the proposed geometric regularisation and dual-branch structure with the hybrid network.To the best of our knowledge,this is the first study to introduce a Vision Transformer into the facial beauty analysis task. 展开更多
关键词 deep neural networks face analysis face biometrics image analysis
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Network analysis of the relationships between depressive symptoms and social participation activities among Chinese older adults and its implications for nursing
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作者 Yebo Yu Hewei Min +3 位作者 Wei Pan Ping Chen Xuxi Zhang Xinying Sun 《International Journal of Nursing Sciences》 CSCD 2024年第4期465-472,I0002,共9页
Objective:Network analysis was used to explore the complex inter-relationships between social participation activities and depressive symptoms among the Chinese older population,and the differences in network structur... Objective:Network analysis was used to explore the complex inter-relationships between social participation activities and depressive symptoms among the Chinese older population,and the differences in network structures among different genders,age groups,and urban-rural residency would be compared.Methods:Based on the 2018 wave of the Chinese Longitudinal Healthy Longevity Survey(CLHLS),12,043 people aged 65 to 105 were included.The 10-item Center for Epidemiologic Studies Depression(CESD)Scale was used to assess depressive symptoms and 10 types of social participation activities were collected,including housework,tai-chi,square dancing,visiting and interacting with friends,garden work,reading newspapers or books,raising domestic animals,playing cards or mahjong,watching TV or listening to radio,and organized social activities.R 4.2.1 software was used to estimate the network model and calculate strength and bridge strength.Results:21.60%(2,601/12,043)of the participants had depressive symptoms.The total social participation score was negatively associated with depressive symptoms after adjusting for sociodemographic factors.The network of social participation and depressive symptoms showed that“D9(Inability to get going)”and“S9(Watching TV and/or listening to the radio)”had the highest strength within depressive symptoms and social participation communities,respectively,and“S1(Housework)”,“S9(Watching TV and/or listening to the radio)”,and“D5(Hopelessness)”were the most prominent bridging nodes between the two communities.Most edges linking the two communities were negative.“S5(Graden work)-D5(Hopelessness)”and“S6(Reading newspapers/books)-D4(Everything was an effort)”were the top 2 strongest negative edges.Older females had significantly denser network structures than older males.Compared to older people aged 65e80,the age group 81e105 showed higher network global strength.Conclusions:This study provides novel insights into the complex relationships between social participation and depressive symptoms.Except for doing housework,other social participation activities were found to be protective for depression levels.Different nursing strategies should be taken to prevent and alleviate depressive symptoms for different genders and older people of different ages. 展开更多
关键词 Depressive symptoms network analysis Older adults Sex characteristics Social participation
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A Multilayer Network Constructed for Herb and Prescription Efficacy Analysis
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作者 Xindi Huang Liwei Liang +3 位作者 Sakirin Tam Hao Liang Xiong Cai Changsong Ding 《Computer Systems Science & Engineering》 2024年第3期691-704,共14页
Chinese Medicine(CM)has been widely used as an important avenue for disease prevention and treatment in China especially in the form of CM prescriptions combining sets of herbs to address patients’symptoms and syndro... Chinese Medicine(CM)has been widely used as an important avenue for disease prevention and treatment in China especially in the form of CM prescriptions combining sets of herbs to address patients’symptoms and syndromes.However,the selection and compatibility of herbs are complex and abstract due to intrinsic relationships between herbal properties and their overall functions.Network analysis is applied to demonstrate the complex relationships between individual herbal efficacy and the overall function of CM prescriptions.To illustrate their connections and correlations,prescription function(PF),prescription herb(PH),and herbal efficacy(HE)intranetworks are proposed based on CM theory to identify relationships between herbs and prescriptions.These three networks are then connected by PF-PH and PH-HE interlayer networks adopting herb dosage to form a multidimensional heterogeneous network,a Prescription-Herb-Function Network(PHFN).The network is applied to 112 classic prescriptions from Treatise on Exogenous Febrile and Miscellaneous Diseases to illustrate the application of PHFN.The PHFN is constructed including 146 functions in PF intra network,89 herbs in the PH intra network,and 163 herbal efficacies in the HE intra network.The results show that herb pairs with synergistic actions have stronger relevance,such as licorice-cassia twig,licorice-Chinese date,fresh ginger-Chinese date,etc.The integration of dosage to the network helps to indicate the main herbs for cluster analysis and automatic formulation.PHFN also reveals the internal relationships between the functions of prescriptions and composed herbal efficacies. 展开更多
关键词 Chinese medicine HERB FORMULA network analysis herb dosage
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Using deep neural networks coupled with principal component analysis for ore production forecasting at open-pit mines
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作者 Chengkai Fan Na Zhang +1 位作者 Bei Jiang Wei Victor Liu 《Journal of Rock Mechanics and Geotechnical Engineering》 SCIE CSCD 2024年第3期727-740,共14页
Ore production is usually affected by multiple influencing inputs at open-pit mines.Nevertheless,the complex nonlinear relationships between these inputs and ore production remain unclear.This becomes even more challe... Ore production is usually affected by multiple influencing inputs at open-pit mines.Nevertheless,the complex nonlinear relationships between these inputs and ore production remain unclear.This becomes even more challenging when training data(e.g.truck haulage information and weather conditions)are massive.In machine learning(ML)algorithms,deep neural network(DNN)is a superior method for processing nonlinear and massive data by adjusting the amount of neurons and hidden layers.This study adopted DNN to forecast ore production using truck haulage information and weather conditions at open-pit mines as training data.Before the prediction models were built,principal component analysis(PCA)was employed to reduce the data dimensionality and eliminate the multicollinearity among highly correlated input variables.To verify the superiority of DNN,three ANNs containing only one hidden layer and six traditional ML models were established as benchmark models.The DNN model with multiple hidden layers performed better than the ANN models with a single hidden layer.The DNN model outperformed the extensively applied benchmark models in predicting ore production.This can provide engineers and researchers with an accurate method to forecast ore production,which helps make sound budgetary decisions and mine planning at open-pit mines. 展开更多
关键词 Oil sands production Open-pit mining Deep learning Principal component analysis(PCA) Artificial neural network Mining engineering
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A CSMA/CA based MAC protocol for hybrid Power-line/Visible-light communication networks:Design and analysis
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作者 Sheng Hao Huyin Zhang +2 位作者 Fei Yang Chenghao Li Jing Wang 《Digital Communications and Networks》 SCIE CSCD 2024年第2期481-497,共17页
Hybrid Power-line/Visible-light Communication(HPVC)network has been one of the most promising Cooperative Communication(CC)technologies for constructing Smart Home due to its superior communication reliability and har... Hybrid Power-line/Visible-light Communication(HPVC)network has been one of the most promising Cooperative Communication(CC)technologies for constructing Smart Home due to its superior communication reliability and hardware efficiency.Current research on HPVC networks focuses on the performance analysis and optimization of the Physical(PHY)layer,where the Power Line Communication(PLC)component only serves as the backbone to provide power to light Emitting Diode(LED)devices.So designing a Media Access Control(MAC)protocol remains a great challenge because it allows both PLC and Visible Light Communication(VLC)components to operate data transmission,i.e.,to achieve a true HPVC network CC.To solve this problem,we propose a new HPC network MAC protocol(HPVC MAC)based on Carrier Sense Multiple Access/Collision Avoidance(CSMA/CA)by combining IEEE 802.15.7 and IEEE 1901 standards.Firstly,we add an Additional Assistance(AA)layer to provide the channel selection strategies for sensor stations,so that they can complete data transmission on the selected channel via the specified CSMA/CA mechanism,respectively.Based on this,we give a detailed working principle of the HPVC MAC,followed by the construction of a joint analytical model for mathematicalmathematical validation of the HPVC MAC.In the modeling process,the impacts of PHY layer settings(including channel fading types and additive noise feature),CSMA/CA mechanisms of 802.15.7 and 1901,and practical configurations(such as traffic rate,transit buffer size)are comprehensively taken into consideration.Moreover,we prove the proposed analytical model has the solvability.Finally,through extensive simulations,we characterize the HPVC MAC performance under different system parameters and verify the correctness of the corresponding analytical model with an average error rate of 4.62%between the simulation and analytical results. 展开更多
关键词 Hybrid power-line/Visible light communication (HPVC)networks MAC protocol CSMA/CA IEEE 802.15.7 IEEE 1901 Performance analysis
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Analysis of Urban Agglomeration Network Structure Based on Baidu Migration Data: A Case Study of the Guangdong-Hong Kong-Macao Greater Bay Urban Agglomeration
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作者 XIA Yuan WANG Bin 《Journal of Landscape Research》 2024年第4期47-50,共4页
The inter-city linkage heat data provided by Baidu Migration is employed as a characterization of inter-city linkages in order to facilitate the study of the network linkage characteristics and hierarchical structure ... The inter-city linkage heat data provided by Baidu Migration is employed as a characterization of inter-city linkages in order to facilitate the study of the network linkage characteristics and hierarchical structure of urban agglomeration in the Greater Bay Area through the use of social network analysis method.This is the inaugural application of big data based on location services in the study of urban agglomeration network structure,which represents a novel research perspective on this topic.The study reveals that the density of network linkages in the Greater Bay Area urban agglomeration has reached 100%,indicating a mature network-like spatial structure.This structure has given rise to three distinct communities:Shenzhen-Dongguan-Huizhou,Guangzhou-Foshan-Zhaoqing,and Zhuhai-Zhongshan-Jiangmen.Additionally,cities within the Greater Bay Area urban agglomeration play different roles,suggesting that varying development strategies may be necessary to achieve staggered development.The study demonstrates that large datasets represented by LBS can offer novel insights and methodologies for the examination of urban agglomeration network structures,contingent on the appropriate mining and processing of the data. 展开更多
关键词 Baidu migration data Social network analysis Urban agglomeration network structure Greater Bay Area urban agglomeration
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Comparative Analysis of the Factors Influencing Metro Passenger Arrival Volumes in Wuhan, China, and Lagos, Nigeria: An Application of Association Rule Mining and Neural Network Models
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作者 Bello Muhammad Lawan Jabir Abubakar Shuyang Zhang 《Journal of Transportation Technologies》 2024年第4期607-653,共47页
This study explores the factors influencing metro passengers’ arrival volume in Wuhan, China, and Lagos, Nigeria, by examining weather, time of day, waiting time, travel behavior, arrival patterns, and metro satisfac... This study explores the factors influencing metro passengers’ arrival volume in Wuhan, China, and Lagos, Nigeria, by examining weather, time of day, waiting time, travel behavior, arrival patterns, and metro satisfaction. It addresses a significant research gap in understanding metro passengers’ dynamics across cultural and geographical contexts. It employs questionnaires, field observations, and advanced data analysis techniques like association rule mining and neural network modeling. Key findings include a correlation between rainy weather, shorter waiting times, and higher arrival volumes. Neural network models showed high predictive accuracy, with waiting time, metro satisfaction, and weather being significant factors in Lagos Light Rail Blue Line Metro. In contrast, arrival patterns, weather, and time of day were more influential in Wuhan Metro Line 5. Results suggest that improving metro satisfaction and reducing waiting times could increase arrival volumes in Lagos Metro while adjusting schedules for weather and peak times could optimize flow in Wuhan Metro. These insights are valuable for transportation planning, passenger arrival volume management, and enhancing user experiences, potentially benefiting urban transportation sustainability and development goals. 展开更多
关键词 Metro Passenger Arrival volume Influencing Factor analysis Wuhan and Lagos Metro Neural network Modeling Association Rule Mining Technique
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Analysis of traffic safety in airport aircraft activity areas based on bayesian networks and fault trees
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作者 Ruijun Guo Jiawen Wu +2 位作者 Fan Ji Wanxiang Wang Yuan Yin 《Digital Transportation and Safety》 2024年第1期8-18,共11页
To assess road traffic safety risk in civil aviation airports and develop effective accident prevention measures,this study proposed a risk assessment method based on accident tree and Bayesian network for airport air... To assess road traffic safety risk in civil aviation airports and develop effective accident prevention measures,this study proposed a risk assessment method based on accident tree and Bayesian network for airport aircraft activity areas.It identified influencing factors in the aircraft activity area from the perspectives of person-vehicle-road-environment-management and analyzed their relationships.The Bayesian network was utilized to determine initial probabilities for each influencing factor.Findings indicated a relatively high overall safety level in the airport's road traffic system.Accident trees were employed to qualitatively and quantitatively analyze common human-vehicle accident patterns.The initial probabilities obtained from the Bayesian network served as basic event probabilities in the accident tree to determine the occurrence probability of the top event.Taking a 4F airport in China as an example,accident cause analysis identified five important risk sources in human-vehicle accidents,including blind spots for special vehicles,illegal driving by drivers,pedestrians violating regulations,passengers entering restricted areas,and blind spots at intersections.Corresponding safety management measures were formulated.The study concluded that the integration of Bayesian networks and accident trees effectively determines accident probabilities and offers specific solutions,thus playing a crucial role in enhancing road traffic safety management within aviation airports. 展开更多
关键词 bayesian network fault tree analysis minimum cut set structural importance accident cause analysis
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Application of Bayesian Analysis Based on Neural Network and Deep Learning in Data Visualization
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作者 Jiying Yang Qi Long +1 位作者 Xiaoyun Zhu Yuan Yang 《Journal of Electronic Research and Application》 2024年第4期88-93,共6页
This study aims to explore the application of Bayesian analysis based on neural networks and deep learning in data visualization.The research background is that with the increasing amount and complexity of data,tradit... This study aims to explore the application of Bayesian analysis based on neural networks and deep learning in data visualization.The research background is that with the increasing amount and complexity of data,traditional data analysis methods have been unable to meet the needs.Research methods include building neural networks and deep learning models,optimizing and improving them through Bayesian analysis,and applying them to the visualization of large-scale data sets.The results show that the neural network combined with Bayesian analysis and deep learning method can effectively improve the accuracy and efficiency of data visualization,and enhance the intuitiveness and depth of data interpretation.The significance of the research is that it provides a new solution for data visualization in the big data environment and helps to further promote the development and application of data science. 展开更多
关键词 Neural network Deep learning Bayesian analysis Data visualization Big data environment
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Mechanisms of Sophora flavescens in the treatment of cervical squamous cell carcinoma based on comprehensive biological analysis,network pharmacology,and experimental verification
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作者 Ning-Jia Song Yuan Wang Ya-Ying Lin 《Cancer Advances》 2024年第10期1-8,共8页
Objective:This study used comprehensive bioinformatics analysis and network pharmacology analysis to investigate the potentially relevant mechanisms of Sophora flavescens against cervical squamous cell carcinoma.Metho... Objective:This study used comprehensive bioinformatics analysis and network pharmacology analysis to investigate the potentially relevant mechanisms of Sophora flavescens against cervical squamous cell carcinoma.Methods:Consistently altered genes involved in cervical squamous cell cancerization were analyzed in the GEO database.The chemical ingredients and target genes of Sophora flavescens were explored using the TCMSP database.We obtained the potential therapeutic targets of Sophora flavescens by intersecting the above genesets and validated them in the GEPIA database.The interaction between Sophora flavescens and target genes was predicted by molecular docking.RT-qPCR was used to verify the changes of target genes in HeLa cells treated with Sophora flavescens.Single-gene GSEA functional analysis were performed to determine the molecular mechanisms.Results:Fifteen genes related to the transformation of cervical squamous cell carcinoma were identified,among which AR and ESR1 were confirmed as targets for kaempferol,wighteone,formononetin,and phaseolinon.These compounds are the active ingredients in Sophora flavescens.Low expressions of AR and ESR1 correlate with a poor prognosis,while Sophora flavescens treatment increases the expression of AR and ESR1 in HeLa.GSEA analysis showed that AR and ESR1 mainly participate in the epithelial-mesenchymal transition in cervical squamous cell carcinoma.Conclusion:Sophora flavescens exert anti-tumor effects by targeting AR and ESR1,which may regulate cancer metastasis. 展开更多
关键词 cervical squamous cell carcinoma biological analysis network pharmacology Sophora flavescens
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Optimizing data aggregation and clustering in Internet of things networks using principal component analysis and Q-learning
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作者 Abhishek Bajpai Harshita Verma Anita Yadav 《Data Science and Management》 2024年第3期189-196,共8页
The Internet of things(IoT)is a wireless network designed to perform specific tasks and plays a crucial role in various fields such as environmental monitoring,surveillance,and healthcare.To address the limitations im... The Internet of things(IoT)is a wireless network designed to perform specific tasks and plays a crucial role in various fields such as environmental monitoring,surveillance,and healthcare.To address the limitations imposed by inadequate resources,energy,and network scalability,this type of network relies heavily on data aggregation and clustering algorithms.Although various conventional studies have aimed to enhance the lifespan of a network through robust systems,they do not always provide optimal efficiency for real-time applications.This paper presents an approach based on state-of-the-art machine-learning methods.In this study,we employed a novel approach that combines an extended version of principal component analysis(PCA)and a reinforcement learning algorithm to achieve efficient clustering and data reduction.The primary objectives of this study are to enhance the service life of a network,reduce energy usage,and improve data aggregation efficiency.We evaluated the proposed methodology using data collected from sensors deployed in agricultural fields for crop monitoring.Our proposed approach(PQL)was compared to previous studies that utilized adaptive Q-learning(AQL)and regional energy-aware clustering(REAC).Our study outperformed in terms of both network longevity and energy consumption and established a fault-tolerant network. 展开更多
关键词 Wireless sensor network Principal component analysis(PCA) Reinforcement learning Data aggregation
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Brain Functional Network Based on Small-Worldness and Minimum Spanning Tree for Depression Analysis 被引量:1
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作者 Bingtao Zhang Dan Wei +1 位作者 Yun Su Zhonglin Zhang 《Journal of Beijing Institute of Technology》 EI CAS 2023年第2期198-208,共11页
Since the outbreak and spread of corona virus disease 2019(COVID-19),the prevalence of mental disorders,such as depression,has continued to increase.To explore the abnormal changes of brain functional connections in p... Since the outbreak and spread of corona virus disease 2019(COVID-19),the prevalence of mental disorders,such as depression,has continued to increase.To explore the abnormal changes of brain functional connections in patients with depression,this paper proposes a depression analysis method based on brain function network(BFN).To avoid the volume conductor effect,BFN was constructed based on phase lag index(PLI).Then the indicators closely related to depression were selected from weighted BFN based on small-worldness(SW)characteristics and binarization BFN based on the minimum spanning tree(MST).Differences analysis between groups and correlation analysis between these indicators and diagnostic indicators were performed in turn.The resting state electroencephalogram(EEG)data of 24 patients with depression and 29 healthy controls(HC)was used to verify our proposed method.The results showed that compared with HC,the information processing of BFN in patients with depression decreased,and BFN showed a trend of randomization. 展开更多
关键词 DEPRESSION brain function network(BFN) small-worldness(SW) minimum spanning tree(MST)
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Discovering hidden information of gene ontology based on complex networks analysis 被引量:3
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作者 唐晋韬 王挺 王戟 《Journal of Southeast University(English Edition)》 EI CAS 2010年第1期31-35,共5页
To resolve the ontology understanding problem, the structural features and the potential important terms of a large-scale ontology are investigated from the perspective of complex networks analysis. Through the empiri... To resolve the ontology understanding problem, the structural features and the potential important terms of a large-scale ontology are investigated from the perspective of complex networks analysis. Through the empirical studies of the gene ontology with various perspectives, this paper shows that the whole gene ontology displays the same topological features as complex networks including "small world" and "scale-free",while some sub-ontologies have the "scale-free" property but no "small world" effect.The potential important terms in an ontology are discovered by some famous complex network centralization methods.An evaluation method based on information retrieval in MEDLINE is designed to measure the effectiveness of the discovered important terms.According to the relevant literature of the gene ontology terms,the suitability of these centralization methods for ontology important concepts discovering is quantitatively evaluated.The experimental results indicate that the betweenness centrality is the most appropriate method among all the evaluated centralization measures. 展开更多
关键词 gene ontology complex network analysis centrality measure
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Application of neural network merging model in dam deformation analysis 被引量:5
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作者 张帆 胡伍生 《Journal of Southeast University(English Edition)》 EI CAS 2013年第4期441-444,共4页
In order to improve the prediction accuracy and test the generalization ability of the dam deformation analysis model, the back-propagation(BP) neural network model for dam deformation analysis is studied, and the m... In order to improve the prediction accuracy and test the generalization ability of the dam deformation analysis model, the back-propagation(BP) neural network model for dam deformation analysis is studied, and the merging model is built based on the neural network BP algorithm and the traditional statistical model. The three models mentioned above are calculated and analyzed according to the long-term deformation observation data in Chencun Dam. The analytical results show that the average prediction accuracies of the statistical model and the BP neural network model are ~ 0.477 and +- 0.390 mm, respectively, while the prediction accuracy of the merging model is ~0. 318 mm, which is improved by 33% and 18% compared to the other two models, respectively. And the merging model has a better generalization ability and broad applicability. 展开更多
关键词 dam deformation analysis neural network statistical model merging model
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SIMULATION AND PERFORMANCE ANALYSIS OF NETWORK ON CHIP ARCHITECTURES 被引量:1
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作者 葛芬 吴宁 《Transactions of Nanjing University of Aeronautics and Astronautics》 EI 2010年第4期326-332,共7页
The network on chip(NoC)is used as a solution for the communication problems in a complex system on chip(SoC)design.To further enhance performances,the NoC architectures,a high level modeling and an evaluation met... The network on chip(NoC)is used as a solution for the communication problems in a complex system on chip(SoC)design.To further enhance performances,the NoC architectures,a high level modeling and an evaluation method based on OPNET are proposed to analyze their performances on different injection rates and traffic patterns.Simulation results for general NoC in terms of the average latency and the throughput are analyzed and used as a guideline to make appropriate choices for a given application.Finally,a MPEG4 decoder is mapped on different NoC architectures.Results prove the effectiveness of the evaluation method. 展开更多
关键词 microprocessor chips ARCHITECTURE network on chip system on chip performance analysis
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Performance analysis in 3G/ad hoc integrated network
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作者 李旭杰 沈连丰 《Journal of Southeast University(English Edition)》 EI CAS 2011年第3期233-238,共6页
An analytical approach to evaluate the performance of the 3G/ad hoc integrated network is presented. A channel model capturing both path loss and shadowing is applied to the analysis so as to characterize power fallof... An analytical approach to evaluate the performance of the 3G/ad hoc integrated network is presented. A channel model capturing both path loss and shadowing is applied to the analysis so as to characterize power falloff vs. distance. The 3G/ad hoc integrated network scenario model is introduced briefly. Based on this model, several performances of the 3G/ ad hoc integrated network in terms of outage probability, call dropping probability and new call blocking probability are evaluated. The corresponding performance formulae are deduced in accordance with the analytical models. Meanwhile, the formula of the 3G/ad hoc integrated network capacity is deduced on the basis of the formula of the outage probability. It is observed from extensive simulation and numerical analysis that the 3G/ad hoc integrated network remarkably outperforms the 3G network with regards to the network performance. This derived evaluation approach can be applied into planning and optimization of the 3G/ad hoc network. 展开更多
关键词 performance analysis 3G network ad hoc network integrated network
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Multi-Strategy Dynamic Spectrum Access in Cognitive Radio Networks: Modeling, Analysis and Optimization 被引量:9
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作者 Yi Yang Qinyu Zhang +3 位作者 Ye Wang Takahiro Emoto Masatake Akutagawa Shinsuke Konaka 《China Communications》 SCIE CSCD 2019年第3期103-121,共19页
Dynamic spectrum access(DSA) based on cognitive radios(CR) technique is an effective approach to address the "spectrum scarcity" issue. However, traditional CR-enabled DSA system employs only single DSA stra... Dynamic spectrum access(DSA) based on cognitive radios(CR) technique is an effective approach to address the "spectrum scarcity" issue. However, traditional CR-enabled DSA system employs only single DSA strategy, which might not be suited to the dynamic network environment. In this paper, we propose a multi-strategy DSA(MS-DSA) system, where the primary and the secondary system share spectrum resources with multiple DSA strategies simultaneously. To analyze the performance of the proposed MS-DSA system, we model it as a continuous-time Markov chain(CTMC) and derive the expressions to compute the corresponding performance metrics. Based on this, we define a utility function involving the concerns of effective throughput, interference quantity on primary users, and spectrum leasing cost. Two optimization schemes, named as spectrum allocation and false alarm probability selection, are proposed to maximize the utility function. Finally, numerical simulations are provided to validate our analysis and demonstrate that the performance can be significantly improved caused by virtues of the proposed MS-DSA system. 展开更多
关键词 COGNITIVE RADIO networks dynamic SPECTRUM access multi-strategy performance analysis optimization
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