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Effects of planting patterns plastic film mulching on soil temperature,moisture, functional bacteria and yield of winter wheat in the Loess Plateau of China 被引量:2
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作者 ZHAO Xiao-dong QIN Xiao-rui +2 位作者 LI Ting-liang CAO Han-bing XIE Ying-he 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2023年第5期1560-1573,共14页
The yield of winter wheat is hindered by drought and low temperature in the Loess Plateau of China.Two common mulching methods to conserve soil moisture,ridge furrows with plastic film mulching (RP) and flat soil surf... The yield of winter wheat is hindered by drought and low temperature in the Loess Plateau of China.Two common mulching methods to conserve soil moisture,ridge furrows with plastic film mulching (RP) and flat soil surfaces with plastic film mulching (FP) are helpful for wheat production.Our previous study indicated that FP could improve wheat yield more effectively than RP,but the reason remains unclear.The effect of mulching method on functional bacteria also needs to be further studied.In this study,winter wheat was employed to evaluate the impacts of mulching method on soil temperature,moisture content,microorganisms and grain yield.The results showed that FP had a warming effect when the soil temperature was low and a cooling effect when the temperature was too high.However,the ability to regulate soil temperature in the RP method was unstable and varied with year.The lowest negative accumulated soil temperature was found in the FP treatment,which was 20–89 and 43–99%lower than that of the RP and flat sowing with non-film mulching control (NP) treatments,respectively.Deep soil moisture was better transferred to topsoil for wheat growth in the FP and RP treatments than the NP treatment,which made the topsoil moisture in the two treatments (especially FP) more sufficient than that in the NP treatment during the early growing stage of wheat.However,due to the limited water resources in the study area,there was almost no difference between treatments in topsoil water storage during the later stage.The wheat yield in the FP treatment was significantly higher,by 12–16and 23–56%,respectively,than in the RP and NP treatments.Significant positive correlations were observed among the negative accumulated soil temperature,spike number and wheat yield.The Chao1 and Shannon indices in the RP treatment were 17 and 3.9%higher than those in the NP treatment,respectively.However,according to network relationship analysis,the interspecific relationships of bacteria were weakened in the RP treatment.Phosphorus solubilizing,ammonification and nitrification bacteria were more active in the RP than in the FP treatment,and microbes with nitrate reduction ability and plant pathogens were inhibited in the RP treatment,which improved nutrient availability and habitat for wheat. 展开更多
关键词 WINTER wheat soil temperature MOISTURE functional bacteria GRAIN YIELD
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16S rRNA Gene-Based Metagenomic Analysis of Soil Bacterial Diversity in Brazzaville, Republic of the Congo
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作者 Irène Marie Cécile Mboukou Kimbatsa Itsouhou Ngô +4 位作者 Armel Ibala Zamba Faly Armel Soloka Mabika Thantique Moutali Lingouangou Joseph Goma-Tchimbakala Etienne Nguimbi 《Advances in Microbiology》 2023年第9期477-498,共22页
Soil contains a great diversity of microorganisms, among which are bacteria. This study aimed to explore bacterial diversity in soil samples in Brazzaville in the Republic of the Congo. Environmental DNA was extracted... Soil contains a great diversity of microorganisms, among which are bacteria. This study aimed to explore bacterial diversity in soil samples in Brazzaville in the Republic of the Congo. Environmental DNA was extracted. The illumina MiSeq sequencing was held and the diversity indices have been computed. Illumina MiSeq sequencing revealed 21 Phyla, four of which were abundant: Proteobacteria, Acidobacteria, Actinobacteria and Bacteroidetes. Soil microbial communities in the studied samples were phylogenetically diverse but with a stable community structure. 17 classes are represented with relative abundances of Rihzobiales, Bacillales, Actinomycetales and Acidobacteriales. 40 families, the Alphaproteobacteria, the Bacilli and the 12 Actinobacteria. 83 orders among which the Rhizobiales are the most abundant followed by Bacillales and the least abundant followed by the Flavobacteriaceae. Of the 28 genera listed, the Bradyrhizobium is the most dominant in Mw3 and Mw4. 25 listed species, Bradyrhizobium, Bacillus, Actinoplanes, and Candidatu coribacter Acidobacterium are the most abundant species. The Shannon indices of Mw3 and Mw4 are equal, the H’max of Mw4 is greater than the H’max of Mw3. The Simpson index of Mw4 is equal to the Simpson index of Mw3, and the Pielou index (J) of Mw4 is less than the R of Mw3, but very close. This study opens interesting perspectives on the knowledge and exploitation of telluric bacteria in several areas of life. 展开更多
关键词 METAGENOMIC Sequencing 16S rRNA Gene soil bacteria
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Improving dryland maize productivity and water efficiency with heterotrophic ammonia-oxidizing bacteria via nitrification and cytokinin activity
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作者 Xiaoling Wang Jiawei Cao +4 位作者 Runhong Sun Wei Liu Lin Qi Peng Song Shenjiao Yang 《The Crop Journal》 SCIE CSCD 2024年第3期880-887,共8页
A two-year field experiment conducted under dryland conditions in semi-humid and drought-prone regions of China aimed to assess the effect of ammonia-oxidizing bacterial on maize water use efficiency and yield.A heter... A two-year field experiment conducted under dryland conditions in semi-humid and drought-prone regions of China aimed to assess the effect of ammonia-oxidizing bacterial on maize water use efficiency and yield.A heterotrophic ammonia-oxidizing bacteria(HAOB)strain S2_8_1 was used.Six treatments were applied:(1)no irrigation+HAOB strain(DI),(2)no irrigation+blank culture medium(DM),(3)no irrigation control(DCK),(4)irrigation+HAOB(WI),(5)irrigation+blank culture medium(WM),and(6)irrigation control(WCK).Results revealed that HAOB treatment increased maize growth,yield,and water use efficiency over controls,regardless of whether the year was wet or dry.This improvement was attributed to the accelerated nitrification in the rhizosphere soil due to HAOB inoculation,which subsequently led to increased levels of leaf cytokinins.Overall,these findings suggest that HAOB inoculation holds promise as a strategy to boost water use efficiency and maize productivity in dryland agriculture. 展开更多
关键词 Heterotrophic ammonia-oxidizing bacteria Rhizosphere soil nitrification CYTOKININ MAIZE Dryland agriculture
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The Preliminary Study on Screening and Application of Phthalic Acid-Degrading Bacteria
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作者 Honghao Zhang Lin Yang +3 位作者 Rubing Xu Yuxiao Sun Yong Yang Yanyan Li 《Advances in Microbiology》 CAS 2024年第4期226-239,共14页
Phthalic acid is a main pollutant, which is also an important reason for the continuous cropping effect of tobacco. In order to degrade the phthalic acid accumulated in the environment and relieve the obstacle effect ... Phthalic acid is a main pollutant, which is also an important reason for the continuous cropping effect of tobacco. In order to degrade the phthalic acid accumulated in the environment and relieve the obstacle effect of tobacco continuous cropping caused by the accumulation of phthalic acid in the soil. In this study, phthalate degrading bacteria B3 is screened from continuous cropping tobacco soil. The results of biochemical identification and 16sDNA comparison show that the homology between degrading bacterium B3 and Enterobacter sp. is 99%. At the same time, the growth of Enterobacter hormaechei subsp. B3 and the degradation of phthalic acid under different environmental conditions are studied. The results show that the environment with a temperature of 30˚C, PH of 7, and inoculation amount of not less than 1.2%, which is the optimal growth conditions for Enterobacter sp. B3. In an environment with a concentration of phthalic acid not exceeding 500 mg/L, Enterobacter sp. B3 has a better effect on phthalic acid degradation, and the degradation rate can reach 77% in 7 d. The results of indoor potting experiments on tobacco show that the degradation rate of phthalic acid by Enterobacter B3 in the soil is about 45%, which can reduce the inhibitory effect of phthalic acid on the growth of tobacco seedlings. This study enriches the microbial resources for degrading phthalic acid and provides a theoretical basis for alleviating tobacco continuous cropping obstacles. 展开更多
关键词 Phthalic Acid Degrading bacteria Rhizosphere soil
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Aromatic compound degradation by iron reducing bacteria isolated from irrigated tropical paddy soils 被引量:6
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作者 W.Reichardt 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2008年第12期1487-1493,共7页
Forty-six candidate phenol/benzoate degrading-iron reducing bacteria were isolated from long term irrigated tropical paddy soils by enrichment procedures.Pure cultures and some prepared mixed cultures were examined fo... Forty-six candidate phenol/benzoate degrading-iron reducing bacteria were isolated from long term irrigated tropical paddy soils by enrichment procedures.Pure cultures and some prepared mixed cultures were examined for ferric oxide reduction and phenol/benzoate degradation.All the isolates were iron reducers,but only 56.5%could couple iron reduction to phenol and/or benzoate degradation,as evidenced by depletion of phenol and benzoate after one week incubation.Analysis of degradative capability using Biolog... 展开更多
关键词 aromatic compounds DEGRADATION iron reducing bacteria paddy soil
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Clear felling and burning effects on soil nitrogen transforming bacteria and actinomycetes population in Chittagong University campus, Bangladesh 被引量:4
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作者 S.M. Sirajul Haque Rahima Ferdoshi +1 位作者 Sohag Miah M. Nural Anwar 《Journal of Forestry Research》 SCIE CAS CSCD 2012年第1期123-130,共8页
The effect of forests clear felling and associated burning on the population of soil nitrogen transforming bacteria and actinomycetes are reported at three pair sites of Chittagong University campus, Bangla- desh in m... The effect of forests clear felling and associated burning on the population of soil nitrogen transforming bacteria and actinomycetes are reported at three pair sites of Chittagong University campus, Bangla- desh in monsoon tropical climate. Clear felled area or burnt site and 15-21 year mixed plantation of native and exotic species, situated side by side on low hill having Typic Dystrochrepts soil was represented at each pair site. At all the three pair sites, clear felled area or burnt site showed very significantly (p~_0.001) lower population of actinomycetes, Rhizobium, Nitrosomonas, Nitrobacter and ammonifying as well as deni- trifying bacteria compared to their adjacent mixed plantation. From en- vironmental consideration, this finding has implication in managing natural ecosystem. 展开更多
关键词 Nitrogen transforming bacteria ACTINOMYCETES forest clearfelling effects burning effects soil microorganisms Chittagong HillTracts
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Microbial diversity of soil bacteria in agricultural field contaminated with heavy metals 被引量:3
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作者 CHIEN Chihching KUO Yumei +3 位作者 CHEN Changchieh HUNG Chunwei YEH Chihwei YEH Weijen 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2008年第3期359-363,共5页
In this study we evaluated the bacterial diversity in a soil sample from a site next to a chemical industrial factory previously contaminated with heavy metals. Analysis of 16S rDNA sequences amplified from DNA direct... In this study we evaluated the bacterial diversity in a soil sample from a site next to a chemical industrial factory previously contaminated with heavy metals. Analysis of 16S rDNA sequences amplified from DNA directly extracted from the soil revealed 17 different bacterial types (genera and/or species). They included Polyangium spp., Sphingomonas spp., Variovorax spp., Hafina spp., Clostridia, Acidobacteria, the enterics and some uncultured strains. Microbes able to tolerate high concentrations of cadmium (500μmol/L and above) were also isolated from the soil. These isolates included strains of Acinetobacter (strain CD06), Enterobacter sp. (strains CD01, CD03, CD04 and CD08) (similar strains also identified in culture-independent approach) and a strain of Stenotrophomonas sp. The results indicated that the species identified from direct analysis of 16S rDNA of the soil can be quite different from those strains obtained from enrichment cultures and the microbial activities for heavy metal resistance might be more appropriately addressed by the actual isolates. 展开更多
关键词 CADMIUM heavy metal heavy metal resistant microbial diversity soil bacteria
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Bacterial Communities in a Buried Ancient Paddy Soil from the Neolithic Age 被引量:1
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作者 SHEN Wei-Shou YIN Rui +1 位作者 LIN Xian-Gui CAO Zhi-Hong 《Pedosphere》 SCIE CAS CSCD 2010年第3期389-398,共10页
An ancient irrigated paddy soil from the Neolithic age was excavated at Chuodunshan Site in the Yangtze River Delta, close to Suzhou, China. The soil organic matter (SOM) content in the prehistoric rice soil is compar... An ancient irrigated paddy soil from the Neolithic age was excavated at Chuodunshan Site in the Yangtze River Delta, close to Suzhou, China. The soil organic matter (SOM) content in the prehistoric rice soil is comparable to the average SOM content of present rice soils in this region, but it is about 5 times higher than that in the parent materials. As possible biomarkers to indicate the presence of the prehistoric paddy soil, the bacterial communities were investigated using the techniques of aerobic and anaerobic oligotrophic bacteria enumeration, Biolog analysis, and polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE). The results showed that in the buried soil layers, the prehistoric paddy soil had the largest number of aerobic and anaerobic oligotrophic bacteria, up to 6.12 and 5.86 log cfu g-1 dry soil, respectively. The prehistoric paddy soil displayed better carbon utilization potential and higher functional diversity compared to the parent materials and a prehistoric loess layer. The Shannon index and richness based on DGGE profiles of bacterial 16S rRNA genes were higher in prehistoric paddy soil than those in the prehistoric loess soil. It might be concluded that the prehistoric irrigated rice cultivation accumulated the SOM in plowed soil layer, and thus increased soil bacterial populations, metabolic activity, functional diversity and genetic diversity. Bacterial communities might be considered as the sensitive indicators of the presence of the prehistoric paddy soil in China's Yangtze River Delta. 展开更多
关键词 BIOMARKER denaturing gradient gel electrophoresis oligotrophic bacteria PALEOSOLS prehistoric paddy soil
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Assessment of biotechnological potential of phosphate solubilizing bacteria isolated from soils of Southern Kazakhstan 被引量:2
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作者 Rakhilya Aipova Svetlana A. Aitkeldiyeva +2 位作者 Askar A. Kurmanbayev Amangeldy K. Sadanov Olga B. Topalova 《Natural Science》 2010年第8期841-845,共5页
Phosphorus (P) is a vital plant nutrient, available to plant roots only in soluble forms that are in short supply in the soil. Adding phosphate- based fertilizers to increase agricultural yields is a widely used pract... Phosphorus (P) is a vital plant nutrient, available to plant roots only in soluble forms that are in short supply in the soil. Adding phosphate- based fertilizers to increase agricultural yields is a widely used practice;however, the bio- availability of P remains low due to chemical transformations of P into insoluble forms. Thus, phosphate solubilizing bacteria (PSB) play an important role in reducing P deficiency in soil. The goal of this study was to assess biotechnological potential of phosphate-solubilizing bacterial strains. In this study, phosphate solubilizing microorganisms (PSM) were isolated from different soil samples of Southern regions of Kazakhstan. The biological activity of PSM was studied based on their effect on the growth of wheat seeds. The different taxonomic genera of these PSM were identified: Arthrobacter spp., Aureobacterium spp., Azotobacter spp., Bacterium spp., Baccillus spp. Finally, phosphate- solubilizing activity of isolated strains of PSM was assessed. 展开更多
关键词 soil PHOSPHATE Solubilizing bacteria Identification Labile PHOSPHORUS Fertilizers PHOSPHATE PHOSPHORUS
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Bacterial Community Structure and Diversity in a Black Soil as Affected by Long-Term Fertilization 被引量:46
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作者 WEI Dan YANG Qian +4 位作者 ZHANG Jun-Zheng WANG Shuang CHEN Xue-Li ZHANG Xi-Lin LI Wei-Qun 《Pedosphere》 SCIE CAS CSCD 2008年第5期582-592,共11页
Black soil(Mollisol) is one of the main soil types in northeastern China. Biolog and polymerase chain reactiondenaturing gradient gel electrophoresis(PCR-DGGE) methods were used to examine the infiuence of various fer... Black soil(Mollisol) is one of the main soil types in northeastern China. Biolog and polymerase chain reactiondenaturing gradient gel electrophoresis(PCR-DGGE) methods were used to examine the infiuence of various fertilizer combinations on the structure and function of the bacterial community in a black soil collected from Harbin,Heilongjiang Province. Biolog results showed that substrate richness and catabolic diversity of the soil bacterial community were the greatest in the chemical fertilizer and chemical fertilizer+manure treatments. The metabolic ability of the bacterial community in the manure treatment was similar to the control. DGGE fingerprinting indicated similarity in the distribution of most 16S rDNA bands among all treatments,suggesting that microorganisms with those bands were stable and not infiuenced by fertilization. However,chemical fertilizer increased the diversity of soil bacterial community. Principal component analysis of Biolog and DGGE data revealed that the structure and function of the bacterial community were similar in the control and manure treatments,suggesting that the application of manure increased the soil microbial population,but had no effect on the bacterial community structure. Catabolic function was similar in the chemical fertilizer and chemical fertilizer+manure treatments,but the composition structure of the soil microbes differed between them. The use of chemical fertilizers could result in a decline in the catabolic activity of fast-growing or eutrophic bacteria. 展开更多
关键词 黑土 长期施肥 菌群结构 化学肥料
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Species of Inorganic Phosphate Solubilizing Bacteria in Red Soil and the Mechanism of Solubilization 被引量:13
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作者 LUOAN-CHENG SUNXI 《Pedosphere》 SCIE CAS CSCD 1993年第3期285-288,共4页
INTRODUCTION The insoluble phosphates which can not be directly absorbed by plants are the mai forms of inorganic phosphate in soil. These kinds of phosphates can be solubilized by several species of bacteria which ar... INTRODUCTION The insoluble phosphates which can not be directly absorbed by plants are the mai forms of inorganic phosphate in soil. These kinds of phosphates can be solubilized by several species of bacteria which are widely spread in soil especially in rhizosphere where70% of the bacteria are capable of solubilizing inorganic phosphate. Many researchers re- 展开更多
关键词 红壤 有机酸 水溶性磷肥 无机肥 磷细菌 种类 作用机理
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The effect of soil moisture on the response by fungi and bacteria to nitrogen additions for N_(2)O production 被引量:1
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作者 Lei Zhang Junqiang Zheng +4 位作者 Xu Han Junhui Zhang Chengxu Li Shicong Geng Shijie Han 《Journal of Forestry Research》 SCIE CAS CSCD 2021年第5期2037-2045,共9页
In addition to bacteria,the contribution of fungi to nitrous oxide(N_(2)O)production has been recognized but the responses of these two broad and unrelated groups of microorganisms to global environmental changes,atmo... In addition to bacteria,the contribution of fungi to nitrous oxide(N_(2)O)production has been recognized but the responses of these two broad and unrelated groups of microorganisms to global environmental changes,atmospheric nitrogen(N)deposition,and precipitation in terms of N_(2)O production are unclear.We studied how these two microbial-mediated N_(2)O production pathways responded to soil moisture conditions and to N addition in an N-limited temperate forest.Soils from a long-term N addition experiment in Changbai Mountain,northeastern China were incubated.Varied concentrations of cycloheximide and streptomycin,both inhibitors of fungal and bacterial activity,were used to determine the contributions of both to N_(2)O production in 66%,98%and 130%water-filled pore spaces(WFPS).The results showed that N_(2)O production decreased significantly with increasing cycloheximide concentration whereas streptomycin was only inhibiting N_(2)O emissions at 98%and 130%WFPS.The bacterial pathway of N_(2)O production in N-addition(Nadd)soil was significantly more dominant than that in untreated(Namb)soil.The difference in the fungal pathway of N_(2)O production between the soil with nitrogen addition and the untreated soil was not significant.Net N_(2)O emissions increased with increasing soil moisture,especially at 130%WFPS,a completely flooded condition.Bacteria dominated carbon dioxide(CO_(2))and N_(2)O emissions in Nadd soil and at 130%WFPS regardless of N status,while fungi dominated CO_(2)and N_(2)O emissions in soil without N addition at 66%and 98%WFPS.The results suggest that flooded soil is an important source of N_(2)O emissions and that bacteria might be better adapted to compete in fertile soils under anoxic conditions. 展开更多
关键词 Nitrous oxide FUNGI bacteria Nitrogen addition soil moisture conditions
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Changes in Bacterial Density, CO<sub>2</sub>Evolution and Enzyme Activities in Poultry Dung Amended Soil 被引量:1
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作者 Lakshmikanti Bhoi Pramod Chandra Mishra 《Open Journal of Soil Science》 2012年第2期196-201,共6页
The utilization of cattle and poultry manure as organic fertilizer improves soil productivity, but arsenic contaminated poultry dung may interfere in soil metabolism and soil fertility. The study was conducted to asse... The utilization of cattle and poultry manure as organic fertilizer improves soil productivity, but arsenic contaminated poultry dung may interfere in soil metabolism and soil fertility. The study was conducted to assess the effects of poultry dung as well as arsenic contamination on soil properties in 1%, 3% and 5% poultry dung amended soil and 1, 5 and 10 ppm sodium arsenite contaminated soil. pH and conductivity were found to be increasing with increase in poultry dung in soil. Other chemical parameters like nitrate, phosphate and organic carbon were found higher in poultry dung amended soil than that of arsenic contaminated soil. Soil bacteria, CO2 evolution and enzymatic activities like amylase, invertase and dehydrogenase were also found higher in poultry dung amended soil suggesting the effectiveness of poultry dung in enhancing soil productivity, even if it was contaminated by As through feed additive. 展开更多
关键词 soil POULTRY DUNG Arsenic soil Enzyme CO2 EVOLUTION bacteria
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Effects of Nano-carbon Humic Acid Water-retaining Fertilizer on Citrus Growth and the Soil Bacterial Community in Citrus Field 被引量:1
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作者 Men Shuhui Ding Fangjun +3 位作者 Zhang Hong Ke Chao Zhang Shiwei Huang Zhanbin 《Meteorological and Environmental Research》 CAS 2018年第6期84-89,共6页
[Objective] In order to reveal the effects of reducing the amount of novel nano-carbon humic acid water-retaining fertilizer(CSF) on soil microbial community structure and citrus growth. [Method]In this study,conventi... [Objective] In order to reveal the effects of reducing the amount of novel nano-carbon humic acid water-retaining fertilizer(CSF) on soil microbial community structure and citrus growth. [Method]In this study,conventional fertilization was as the control(KC1) in Wanzhou citrus orchard of Three Gorges Reservoir area. CSF reductions by 0%(KC2),10%(KC3),20%(KC4),30%(KC5) and 40%(KC6) were used to analyze the changes of soil bacterial community structure,citrus yield and quality. [Result]The results showed that the observed species,Shannon index,Chao1 index and PDwholetree of KC6 were higher than those of KC1,and were the same as KC2. The abundance of Xanthomonadaceae was the highest in KC5. Compared with KC1,the Xanthomonadaceae in KC3,KC4 and KC6 was significantly decreased,and the levels of Nitrosomonadaceae and Pseudomonasaceae were higher than that of KC1 after the treatment of KC6. Sphingomonas in different reduction treatments was lower than that of KC1,but Burkholderia and Pseudomonas were significantly higher than those of KC1. It was found that the similarity among treatments was small after bacterial community similarity clustering analysis,and citrus yield increased somewhat after CSF fertilization reduction.When CSF fertilization reduced by 30%,citrus yield increased by 4. 50%. When CSF fertilization reduced by 40%,citrus yield decreased by4. 14%. After CSF fertilization,citrus quality did not change significantly in CSF conventional fertilization and reduction of 10% and 40%,while significantly decreased in 20% and 30% of fertilization reduction. [Conclusion] CSF fertilization reduction changed the diversity of soil bacterial community structure and the yield and quality of citrus. 展开更多
关键词 Nano-carbon humic acid water-retaining fertilizer(CSF) soil bacteria Community structure Yield Quality
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Antibiotic-Resistant Bacterial Group in Field Soil Evaluated by a Newly Developed Method Based on Restriction Fragment Length Polymorphism Analysis 被引量:1
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作者 Katsuji Watanabe Naoto Horinishi Kunimasa Matumoto 《Advances in Microbiology》 2015年第12期807-816,共10页
Spreading of antibiotic resistant bacteria into environment is becoming a major public health problem, implicating affair of the indirect transmission of antibiotic resistant bacteria to human through drinking water, ... Spreading of antibiotic resistant bacteria into environment is becoming a major public health problem, implicating affair of the indirect transmission of antibiotic resistant bacteria to human through drinking water, or vegetables, or daily products. Until now, the risk of nosocomial infection of antibiotic resistant bacteria has mainly been evaluated using clinical isolates by phenotypic method. To evaluate a risk of community-acquired infection of antibiotic resistant bacteria, a new method has been developed based on PCR-RFLP without isolation. By comparing restriction fragment lengths of the 16S rDNA gene from bacterial mixture grown under antibiotic treatment to those simulated from the DNA sequence, bacterial taxonomies were elucidated using the method of Okuda and Watanabe [1] [2]. In this study, taxonomies of polymyxin B resistant bacteria group in field soils, paddy field with organic manure and upland field without organic manure were estimated without isolation. In the both field soils, the major bacteria grown under the antibiotic were B. cereus group, which had natural resistance to this antibiotic. In field applied with organic manure, Prevotella spp., and the other Cytophagales, which were suggested to be of feces origin and to acquire resistance to the antibiotic, were detected. When numbers of each bacterial group were roughly estimated by the most probable number method, B. cereus group was enumerated to be 3.30 × 106 MPN/g dry soil in paddy field soil and 1.32 × 106 MPN/g dry soil in upland filed. Prevotella spp. and the other Cytophagales in paddy field were enumerated to be 1.31 × 106 MPN, and 1.07 × 106 MPN·g-1 dry soil. 展开更多
关键词 POLYMYXIN B Resistant bacteria Field soil Microchip ELECTROPHORESIS Multiple Enzyme RESTRICTION FRAGMENT Length Polymorphism Analysis the Most PROBABLE Number METHOD
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Application of bacteria-plant association in bio-degradation of diesel oil pollutants in soil 被引量:2
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作者 Lu, Sijin Teng, Yanguo +1 位作者 Sun, Zongjian Wang, Jinsheng 《Chinese Journal Of Geochemistry》 EI CAS 2011年第2期220-225,共6页
The bacteria and plants were associated to remove diesel oil pollutants from soil.Three efficiently degrading bacteria(named strains Q10,Q14 and Q18,respectively) were isolated.Two plants(alfalfa and Indian mustard) w... The bacteria and plants were associated to remove diesel oil pollutants from soil.Three efficiently degrading bacteria(named strains Q10,Q14 and Q18,respectively) were isolated.Two plants(alfalfa and Indian mustard) were selected to form the association.Biodegradation of diesel oil pollutants in soil was accelerated by bacteria-plants association.The main results are summarized as follows.The plants-bacteria association was more effective in biodegradation of diesel oil pollutants in soil than in respective experiments carried out with plants or bacteria alone.Strain Q18-Indian mustard association resulted in the maximum diesel oil reduction(69.18%).The activities of catalase and polyphenol oxidase in soil were enhanced and microbial populations in soil,especially in rhizosphere,were also stimulated in the treatment of bacteria-plant association.Overall,the soil conditions might be improved by alfalfa or Indian mustard to benefit the growth of bacteria,which resulted in degradation of diesel oil pollutants more effective by the bacteria-plant association.The bacteria-plants association may be a better approach to the removal of diesel oil pollutants from soil. 展开更多
关键词 bacteria-plant association BIODEGRADATION diesel oil pollutant soil
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Soil microbial community diversity and distribution characteristics under three vegetation types in the Qilian Mountains, China 被引量:2
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作者 TONG Shan CAO Guangchao +2 位作者 ZHANG Zhuo ZHANG Jinhu YAN Xin 《Journal of Arid Land》 SCIE CSCD 2023年第3期359-376,共18页
Qilian Mountains in Northwest China is a significant ecological security barrier due to its distinctive geographic setting,which has significant biological resource and gene pool.In order to assess the soil quality an... Qilian Mountains in Northwest China is a significant ecological security barrier due to its distinctive geographic setting,which has significant biological resource and gene pool.In order to assess the soil quality and ecosystem health in this area,we identified the structural characteristics and functional groups of soil microbial communities.This study focused on Amidongsuo,a typical watershed of the Qilian Mountains,and researched the vertical distribution and dominant populations of soil microorganisms in different habitats,and the relationship between soil microorganisms and environmental factors.Soil microorganisms from three grassland plots,five shrubland plots,and five forest plots in Amidongsuo were studied using high-throughput sequencing.The Venn diagram showed that the types of bacteria were fewer than those of fungi in Amidongsuo.Soil bacteria Acidobacteriota,Proteobacteria,and Methylomirabilota as well as fungi Basidiomycota,Ascomycota,and Mortierellomycota played dominant roles in Amidongsuo,according to the LEfSe(linear discriminant analysis(LDA)effect size)and community structure analyses.According to the ANOSIM(analysis of similarities)result,for both bacteria and fungi,R values of grassland and shrubland were small(R^(2)=0.045 and R^(2)=0.256,respectively),indicating little difference between these two ecosystems.RDA(redundancy analysis)showed a closer relationship between soil nutrients and fungi,and a gradually decreasing correlation between soil nutrients and microorganisms with increasing soil depth.Bacteria were mainly affected by pH,nitrogen(N),and potassium(K),while fungi were mainly affected by K.Overall,fungi had more effect on soil quality than bacteria.Therefore,adjustment of soil K content might improve the soil environment of Amidongsuo in the Qilian Mountains. 展开更多
关键词 FUNGI bacteria diversity soil nutrient Qilian Mountains
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Variation of Potential Nitrification and Ammonia-Oxidizing Bacterial Community with Plant-Growing Period in Apple Orchard Soil
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作者 LIU Ling-zhi QIN Si-jun +2 位作者 Lü De-guo WANG Bing-ying YANG Ze-yuan 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2014年第2期415-425,共11页
In this study, we investigated the potential nitrification and community structure of soil-based ammonia-oxidizing bacteria (AOB) in apple orchard soil during different growth periods and explored the effects of env... In this study, we investigated the potential nitrification and community structure of soil-based ammonia-oxidizing bacteria (AOB) in apple orchard soil during different growth periods and explored the effects of environmental factors on nitrification activity and AOB community composition in the soil of a Hanfu apple orchard, using a culture-dependent technique and denaturing gradient gel electrophoresis (DGGE). We observed that nitrification activity and AOB abundance were the highest in November, lower in May, and the lowest in July. The results of statistical analysis indicated that total nitrogen (N) content, NH4+-N content, NO3-N content, and pH showed significant correlations with AOB abundance and nitrification activity in soil. The Shannon-Winner diversity, as well as species richness and evenness indices (determined by PCR-DGGE banding patterns) in soil samples were the highest in September, but the lowest in July, when compared to additional sampled dates. The DGGE fingerprints of soil-based 16S rRNA genes in November were apparently distinct from those observed in May, July, and September, possessing the lowest species richness indices and the highest dominance indices among all four growth periods. Fourteen DGGE bands were excised for sequencing. The resulting analysis indicated that all AOB communities belonged to the 13-Proteobacteria phylum, with the dominant AOB showing high similarity to the Nitrosospira genus. Therefore, soil-based environmental factors, such as pH variation and content of NHa+-N and NO3--N, can substantially influence the abundance of AOB communities in soil, and play a critical role in soil-based nitrification kinetics. 展开更多
关键词 apple orchard soil ammonia-oxidizing bacteria potential nitrification community structure PCR-dena~'ing gradientgel electrophoresis
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Testing the possibility of horizontal transfer of introduced neomycin phosphotransferase(nptII) gene of transgenic Eucalyptus camaldulensis into soil bacteria
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作者 Katsuaki ISHII LU Meng-zhu 《Forestry Studies in China》 CAS 2008年第2期134-136,共3页
The possible horizomal transfer of transgenes is of great concern when the transgenic plants are released imo the field. To test the possible transfer of nptII of transgenic trees into soil bacteria, we have used a st... The possible horizomal transfer of transgenes is of great concern when the transgenic plants are released imo the field. To test the possible transfer of nptII of transgenic trees into soil bacteria, we have used a stool DNA preparation kit to isolate the DNA from the soils in the rhizospheres of two non- and eight transgenic Eucalyptus camaldulensis trees. All the samples have provided the corresponding PCR products in the amplification with bacterial 16S RNA specific sequences, which indicates that the quality of the isolated DNA is adequate for amplification. The nptⅡ specific band has been amplified in three soil samples from the transgenic trees and even treated with filtration before the DNA isolation. This indicates that nptII DNA exists in the soil, although it is still unclear whether the DNA was in the soil particles, in the soil bacteria or in the Agrobacterium comamination which was used for the E. camaldulensis transformation. Two approaches on isolation of bacterial DNA have been suggested for testing the possibility of this event in the future. 展开更多
关键词 horizontal transfer nptⅡ soil bacteria transgenic trees
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Optimization of Cellulase Production Conditions in Bacteria Isolated from Soils in Brazzaville
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作者 Thantique Moutali Lingouangou Raoul Ampa +6 位作者 Etienne Nguimbi Prince Moukouyou Bissombolo Ngo-Itsouhou Faly Armel Soloka Mabika Tarcisse Baloki Ngoulou Stech Anomene Eckzechel Nzaou 《Journal of Biosciences and Medicines》 CAS 2022年第8期14-28,共15页
Objective: The objective of the present study is to optimize cellulase production in five strains: (Pantoea dispersa MLTBY6 (MT646430.1);Pseudomonas aeruginosa MLTBM2 (MT646431.1);Pseudomonas monteilii MLTBC10 (MT6746... Objective: The objective of the present study is to optimize cellulase production in five strains: (Pantoea dispersa MLTBY6 (MT646430.1);Pseudomonas aeruginosa MLTBM2 (MT646431.1);Pseudomonas monteilii MLTBC10 (MT674682.1);Bacillus subtilis MLTBC5 (MT674681.1) and Lysinibacillus fusiformis MLTBB7 selected cellulase producers isolated from soils in Brazzaville, Republic of the Congo. Materials and Methods: The cellulolytic activity of the selected cellulase-producing strains was determined by transferring the strains to a petri dish containing CMC culture medium with the following composition: cellulose 1%, K<sub>2</sub>HPO<sub>4</sub> 0.2%, MgSO<sub>4</sub> 0.03%, peptone 1%, (NH<sub>4</sub>)<sub>2</sub>SO<sub>4</sub> 0.2% adjusted to a pH value of 7, previously poured and then frozen. The dishes were incubated in an oven at 37&deg;C for 48 hours. The petri dishes were then flooded with 1% lugol for 15 minutes. A positive reading is indicated by the formation of a hydrolysis zone, the diameters of the hydrolysis zone were measured with a ruler. Strains with a broad lysis spectrum were selected. Optimisation of cellulase production by five bacterial strains isolated from the soil was done using the following factors: temperature and pH. Results: The production of cellulase showed that these strains showed a high production of cellulase at pH values between 5.6 and 9 with an optimum of pH = 8 and temperature values between 35°C and 40°C with an optimum at temperature t = 40°C. Of the carbon sources used, two sources, namely glucose and galactose, showed a high production of cellulase compared to the other carbon sources. However, the two nitrogen sources, ammonium sulphate and urea, were favourable for cellulase production by all five strains. Fe<sup>2+</sup>, CO<sup>2+</sup>, Zn<sup>2+</sup> ions are favourable for cellulase production by these strains, with a referendum for Fe<sup>2+</sup>. Conclusion: From these results, we conclude that the sources of carbon (glucose and galactose), nitrogen (ammonium sulphate and urea) and ions (Fe<sup>2+</sup>, CO<sup>2+</sup>, Zn<sup>2+</sup>) added to these five strains were the elements favouring the good production of cellulase. 展开更多
关键词 OPTIMIZATION Condition Production CELLULASE soil bacteria
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