Did Species and Functional Diversities of Sandy Intertidal Marine Nematodes Reveal Similar Response to Environmental Changes?

Free living marine nematodes were sampled from two sandy beaches in Dalian City,in December of 2015,and April,July,and October of 2016.The spatial and seasonal variations of marine nematode species diversity(based on species abundance dataset)and functional diversity(based on functional traits dataset:feeding types and life history strategies)were investigated to understand the environmental drivers and how they respond to specific environmental variations.Sediment granularity was revealed to be the main environmental factor causing spatial differences in nematode diversity indices between the two beaches.Species diversity indices,namely species number,Margalef index,Shannon-Wiener diversity index(H’),were higher in fine-grained sediments,while the functional diversity indices,including functional evenness,functional dispersion,and Rao’s quadratic entropy index(RaoQ),were higher in coarse-grained sediments.Nematode species diversity indices also fluctuated with seasonal variations of temperature,dissolved oxygen,pH,salinity,and sediment chlorophyll-a within the study beaches.However,functional diversity indices did not show significant seasonal variations and exhibited weak correlation with the studied environmental variables.Overall,the functional diversity indices were negatively correlated with the species diversity indices,suggesting an inconsistent response to environmental changes.A decrease in nematode species diversity in coarse sands,accompanied by an increase in functional diversity,can be regarded as an early warning signal of environment disturbance.If more biological traits are involved in calculating functional diversity indices,it will be helpful for the future study of the internal connections of species diversity and functional diversity.

Patterns of species diversity and functional diversity of breeding birds in Hangzhou across an urbanization gradient

Given the rapid rise in human population and increasing urbanization,it is important to understand their potential impacts on biodiversity.From March 2007 to August 2007,we conducted bird surveys in 90 strip transects,each 3 km long and 100 m wide,along a gradient of urbanization in Hangzhou,China.This gradient spanned a range of urbanization levels including urban areas,rural-urban continuum areas,farming areas,mixed forest/farming areas and forested areas.We recorded 96 breeding bird species and classified them into nine functional groups based on nesting requirements.The nine functional groups consisted of canopy nesters,shrub nesters,canopy/shrub nesters,natural cavity nesters,building nesters,natural cavity/building nesters,ground nesters,water surface nesters and parasitic nesters.Species and functional diversities were estimated based on the Shannon-Wiener index.Environmental data of each transect as human disturbance,vegetation cover and building index were also measured,and a synthetic urbanization index of each transect was introduced based on these data.We used regression analyses to model the relationship of species abundance,species diversity,functional abundance and functional diversity with this synthetic index.The results show that urbanization significantly reduces species richness,species diversity,functional richness and functional diversity,but the specific patterns differed.The relationship between species abundance/species diversity and urbanization is linear.In contrast,the relationship between functional diversity and urbanization was quadratic.In other words,with increased urbanization,functional diversity declined only slightly at first but then dropped at an accelerating rate.This implies that,although moderate urbanization reduces species diversity of breeding birds,it affects functional diversity of breeding birds only slightly in Hangzhou.The regression analysis of species diversity and functional diversity suggests a quadratic relationship between species diversity and functional diversity,i.e.,a linear relationship between species diversity and functional diversity can only exist at low diversity levels across urbanization gradients and increasing species abundance does not lead to an increase in functional diversity at the highest diversity levels.

Overstory functional groups indicate the legacy of land use in a secondary tropical forest in southwestern China

Anthropogenic disturbances are widespread in tropical forests and influence the species composition in the overstory.However,the impacts of historical disturbance on tropical forest overstory recovery are unclear due to a lack of disturbance data,and previous studies have focused on understory species.In this study,the purpose was to deter-mine the influence of historical disturbance on the diver-sity,composition and regeneration of overstory species in present forests.In the 20-ha Xishuangbanna tropical sea-sonal rainforest dynamics plot in southwestern China,the historical disturbance boundaries were delineated based on panchromatic photographs from 1965.Factors that drove species clustering in the overstory layer(DBH≥40 cm)were analyzed and the abundance,richness and composition of these species were compared among different tree groups based on multiple regression tree analysis.The coefficient of variation of the brightness value in historical panchro-matic photographs from 1965 was the primary driver of spe-cies clustering in the overstory layer.The abundance and richness of overstory species throughout the regeneration process were similar,but species composition was always different.Although the proportion of large-seeded and vigorous-sprouting species showed no significant differ-ence between disturbed and undisturbed forests in the tree-let layer(DBH<20 cm),the difference became significant when DBH increased.The findings highlight that historical disturbances have strong legacy effects on functional group composition in the overstory and the recovery of overstory species was multidimensional.Functional group composi-tion can better indicate the dynamics of overstory species replacement during secondary succession.

Trait variation and functional diversity maintenance of understory herbaceous species coexisting along an elevational gradient in Yulong Mountain,Southwest China

Characterizing trait variation across different ecological scales in plant communities has been viewed as a way to gain insights into the mechanisms driving species coexistence.However,little is known about how changes in intraspecific and interspecific traits across sites influence species richness and community assembly,especially in understory herbaceous communities.Here we partitioned the variance of four functional traits(maximum height,leaf thickness,leaf area and specific leaf area)across four nested biological scales:individual,species,plot,and elevation to quantify the scale-dependent distributions of understory herbaceous trait variance.We also integrated the comparison of the trait variance ratios to null models to investigate the effects of different ecological processes on community assembly and functional diversity along a 1200-m elevational gradient in Yulong Mountain.We found interspecific trait variation was the main trait variation component for leaf traits,although intraspecific trait variation ranged from 10% to 28% of total variation.In particular,maximum height exhibited high plasticity,and intraspecific variation accounted for 44% of the total variation.Despite the fact that species composition varied across elevation and species richness decreased dramatically along the elevational gradient,there was little variance at our largest(elevation)scale in leaf traits and functional diversity remained constant along the elevational gradient,indicating that traits responded to smaller scale influences.External filtering was only observed at high elevations.However,strong internal filtering was detected along the entire elevational gradient in understory herbaceous communities,possibly due to competition.Our results provide evidence that species coexistence in understory herbaceous communities might be structured by differential niche-assembled processes.This approach ee integrating different biological scales of trait variation ee may provide a better understanding of the mechanisms involved in the structure of communities.

Functional diversity dominates positive species mixture effects on ecosystem multifunctionality in subtropical plantations

Mixed-species plantations generally exhibit higher ecosystem multifunctionality than monospecific plantations.However,it is unclear how tree species functional composition influences species mixture effects on ecosystem multifunctionality.We selected 171 monospecific and mixed-species plantations from nine regions across subtropical China,and quantified 13 key ecosystem functional properties to investigate how species mixture effects on ecosystem multifunctionality are modulated by functional diversity and identity.We found that ecosystem multifunctionality was significantly higher(p<0.05)in mixed tree plantations than in monospecific plantations except the mixed-conifer species plantations.Across all regions,ecosystem multifunctionality was significantly higher(p<0.05)in mixed conifer-broadleaf plantations than in monospecific plantations of the corresponding species,but not different between mixed and monospecific coniferous plantations.The magnitude of species mixture effects on ecosystem multifunctionality varied greatly with tree species compositions.Taking Cunninghamia lanceolata Lamb.as an example,the effects varied from a range of 2.0%–9.6%when mixed with a conifer species to 36%–87%when mixed with a broadleaf species.The functional diversity was the dominate driver shaping ecosystem multifunctionality,while functional identity,as expressed by community-weighted mean of specific leaf area,also had a positive effect on ecosystem multifunctionality through the increased below-ground nitrogen and phosphorus stocks regulated by specific leaf area of the mixing tree species.Our study highlights the important role of functional diversity in shaping ecosystem multifunctionality across region-wide environmental conditions.Mixed conifer-broadleaf tree plantations with distinct functional traits benefit the enhancement of ecosystem multifunctionality,and the magnitude of species mixture effects is modulated by the functional identity of tree species composition;those relationships deserve a special consideration in multifunctional management context of subtropical plantations.

Species-area relationship within and across functional groups at alpine grasslands on the northern Tibetan Plateau,China

The species-area relationship （SAR） is one of the most fundamental concepts in community ecology and is helpful for biodiversity conservation. However, few studies have systematically addressed this topic for different alpine grassland types on the Tibetan Plateau, China. We explored whether the plant composition of different functional groups affects the manner in which species richness inereases with increasing area at scales ≤ 1.0 m^2. We also compared species richness （S） within and across forbs, legumes, sedges and grasses, with sampling subplot area （A） increasing from 0.0625 m^2 to 1.0 m^2 between alpine meadow and steppe communities. We applied a logarithmic function （S = b0 ＋ b1 ln A） to determine the slope and intercept of SAR curves within and across functional groups. The results showed that the logarithmic relationship holds true between species richness and sampling area at these small scales. Both the intercept and slope of the logarithmic forbs-area curves are significantly higher than those for the three other functional groups （P 〈 0.05）. Forb accounts for about 91.9 % of the variation in the intercept and 75.0% of the variation in the slope of the SAR curve when all functional groups＇ data were pooled together. Our results indicated that the different SAR patterns should be linked with species dispersal capabilities, environmental filtering, and life form composition within alpine grassland communities. Further studies on the relationship between species diversity and ecosystem functions should specify the differential responses of different functional groups to variations in climate and anthropogenic disturbances.

Mismatch between species distribution and climatic niche optima in relation to functional traits

Background:Forecasts of climate change impacts on biodiversity often assume that the current geographical distributions of species match their niche optima.However,empirical evidence has challenged this assumption,suggesting a mismatch.We examine whether the mismatch is related to functional traits along temperature or precipitation gradients.Methods:The observed distributions of 32 tree species in northeast China were evaluated to test this mismatch.Bayesian models were used to estimate the climatic niche optima,i.e.the habitats where the highest species growth and density can be expected.The mismatch is defined as the difference between the actual species occurrence in an assumed niche optimum and the habitat with the highest probability of species occurrence.Species’functional traits were used to explore the mechanisms that may have caused the mismatches.Results:Contrasting these climatic niche optima with the observed species distributions,we found that the distribution-niche optima mismatch had high variability among species based on temperature and precipitation gradients.However,these mismatches depended on functional traits associated with competition and migration lags only in temperature gradients.Conclusions:We conclude that more relevant research is needed in the future to quantify the mismatch between species distribution and climatic niche optima,which may be crucial for future designs of forested landscapes,species conservation and dynamic forecasting of biodiversity under expected climate change.

Effects of natural forest conversion and plantation tree species composition on soil macrofauna communities in Northeast China mountains

As primary and secondary forests are being replaced by plantations across the globe,the soil macrofauna community structure is also affected,but little is known about the impact of mixed culture plantations compared with monocultures on the soil macrofauna.To determine the impact of forest conversion on soil macrofauna,we surveyed the soil macrofauna in two broad-leaved and three coniferous monoculture stands and four coniferous-broadleaved mixed stands,and in adjacent reserved secondary stands as a reference.Soil macro fauna community composition was significant affected by forest type,season and their interaction(P<0.05).The abundance,taxa richness and diversity of soil macro fauna changed to different degrees depending on the plantation type.Broadleaved monoculture stands and secondary stands had similar macrofauna abundance and taxa richness,but values were lower in coniferous stands than in secondary stands.The Shannon index for macrofauna in coniferous stands was also the lowest,but the Pielou index did not differ between forest types.The negative effects of the conifer monoculture on soil macro fauna were not present in the mixed stands with broad-leaved trees.Forest conversion impacted soil properties;soil moisture,NO_(3)^(-),and pH were significant drivers of soil macrofauna community structure.The impact of forest conversion on soil macrofauna was closely dependent on tree species composition and diversity.The macro fauna community structure in the broadleaved and the mixed stands were relatively similar to that in the natural forest,and thus recommended for forest conversion in the study area.

Mapping and Functional Analysis of LE Gene in a Lethal Etiolated Rice Mutant at Seedling Stage

An EMS(ethy methanesulfonate)-induced lethal etiolated(le)mutant obtained from the rice variety Zhongjian 100 was characterized by lethal etiolated phenotypes,with significantly reduced levels of chlorophyll a,chlorophyll b,total chlorophyll,and carotenoids.Additionally,the mutant displayed a significantly decreased number of chloroplast grana,along with irregular and less-stacked grana lamellae.The le mutant showed markedly diminished root length,root surface area,and root volume compared with the wild type.It also exhibited significantly lower catalase activity and total protein content,while peroxidase activity was significantly higher.Using the map-based cloning method,we successfully mapped the LE gene to a 48-kb interval between markers RM16107 and RM16110 on rice chromosome 3.A mutation(from T to C)was identified at nucleotide position 692 bp of LOC_Os03g59640(ChlD),resulting in a change from leucine to proline.By crossing HM133(a pale green mutant with a single-base substitution of A for G in exon 10 of ChlD subunit)with a heterozygous line of le(LEle),we obtained two plant lines heterozygous at both the LE and HM133 loci.Among 15 transgenic plants,3 complementation lines displayed normal leaf color with significantly higher total chlorophyll,chlorophyll a,and chlorophyll b contents.The mutation in le led to a lethal etiolated phenotype,which has not been observed in other ChlD mutants.The mutation in the AAA+domain of ChlD disrupted the interaction of ChlDle with ChlI as demonstrated by a yeast two-hybrid assay,leading to the loss of ChlD function and hindering chlorophyll synthesis and chloroplast development.Consequently,this disruption is responsible for the lethal etiolated phenotype in the mutant.

The Influence of Plant Diversity and Functional Composition on Ecosystem Stability of Four Stipa Communities in the Inner Mongolia Plateau

The main purpose of this study was to examine the effects of plant species diversity and functional composition (the identity of the plant functional groups) on ecosystem stability of Stipa, communities in the Inner Mongolia Plateau. The research work was based on a 12-year study (from 1984 to 1995) of species abundance, diversity, and primary productivity of four Stipa communities, i.e. S. baicalensis Roshev., S. grandis P. Smirn., S, krylovii Roshev., and S. klemenzii Roshev. respectively. The Shnnon-Wiener index was used as a measurement of plant diversity, while functional composition was used to differentiate the functional groups that were included in the communities. The plant species of four Stipa communities were classified into functional groups based on the differences in life forms and ecological groups, which influence their performance in resource requirements, seasonality of growth, tolerance to water stress, and life history. Plant species were classified into five functional groups based on their differences in life form, shrubs and half shrubs, perennial bunch grasses, perennial rhizome grasses, forbs, annuals and biennials. Based on their differences in water requirement these species were classified into four functional groups: xerads, intermediate xerads, intermediate mesophytes, and mesophytes. The results showed: 1) Plant species diversity stabilized ecosystem processes. Shannon-Wiener index were 2.401 4, 2.172 0, 1.624 8, 0.354 3 from S. baicalensis community to S. grandis, S. krylovii and S. klemenzii community, respectively. The dynamics of the aboveground net primary productivity (ANPP) for a 12-year's period showed a reverse pattern, the coefficients of variation of the four communities were 21.94%, 20.63%, 29.21% and 39.72% respectively. 2) The Life form functional group component of diversity was a greater determinant of the ecosystem processes than the species component of diversity. The effects of perennial bunch grasses, perennial rhizome grasses and forbs on community stability were highly significant. 3) The ecological group component of diversity was also a great determinant of the ecosystem processes. The effects of xerads, intermediate xerads, and mesophytes on community stability were also very strong.

Concepts of keystone species and species importance in ecology

This paper discussed the keystone species concept and introduced the typical characteristics of keystone species and their identification in communities or ecosystems. Based on the research of the keystone species, the concept of species importance (SI) was first advanced in this paper. The species importance can be simply understood as the important value of species in the ecosystem, which consists of three indexes: species structural important value (SIV), functional important value (FIV) and dynamical important value (DIV). With the indexes, the evaluation was also made on species importance of arbor trees in the Three-Hardwood forests (Fraxinus mandshurica, Juglans mandshurica, and Phellodendron amurense) ecosystem.

Functional diversity of Cercidiphyllum japonicum, communities in the Shennongjia Reserve, central China

Functional diversity is significant to ecological processes of plant communities. We analyzed the variation of functional diversity of endangered species, Cercidiphyllum japonicum, communities along an elevational gradient in the Shennongjia Reserve, central China. Sixty plots of 10 9 20 m from 1,350 to 2,050 m were set up and species composition, traits and environmental variables were measured and recorded. These data were analyzed using five functional diversity indices, functional attribute diversity, modified functional attribute diversity, plot based functional diversity, community based functional diversity and Rao＇s functional diversity indices（Rao＇s index）,Functional diversities of C. japonicum communities were rich and varied greatly. Functional diversity declined nonlinearly with increasing elevation. Functional diversity was significantly correlated with species richness and heterogeneity. Elevation was a key environmental variable influencing functional diversity and species diversity. The five functional diversity indices were all effective for measuring functional diversity of communities. Functional diversity can be used as an indicator of conservation efficiency of endangered species such as C. japonicum.

Relationship between diversity of forest plant species and environmental gradient in eastern mountainous area of Heilongjiang Province, China

Twenty-three secondary forest communities with different structure were selected in Mao＇er Mountain National Park of Heilongjiang Province, China to study the relationship between diversity of forest plant species and environmental gradient. The forest plant species diversity was analyzed by the diversity index, and the environmental factors was quantified by the method of Whittaker＇s quantification of environmental gradient. Meanwhile, β-diversity indexes of communities were calculated with similar measurements. The results showed that the Shannon-wiener diversity index of forest plant species increased with the increase of the environmental gradient, and the β-diversity indexes of communities showed a liner increase along with the change of environmental gradient.

Mixing planting proportions in a plantation affects functional traits and biomass allocation of Cunninghamia lanceolata and Phoebe bournei seedlings

Functional traits of trees are significantly associated with their adaptation strategies and productivity.However,the effects of species composition and mixing proportion on the functional traits of trees grown in mixed plantations have not been studied extensively.In this study,planting experiments(duration about seven months)were used to study variations in functional traits and biomass allocation of C unninghamia lanceolata(Lamb.)Hook and Phoebe bournei(Hemsley)Yang seedlings in five different mixes(0C:4P,1C:3P,1C:1P,3C:1P,and 4C:0P).Total leaf area per seedling increased in each species as its respective proportion in the mixture decreased.However,the specific leaf area decreased for P.bournei under low percent composition,and the specific leaf area for C.lanceolata differed only marginally among the plantings.The net photosynthetic rates of the two species were higher in the mixed plantings than in their corresponding monocultures,whereas the transpiration rate,stomatal conductance,and instantaneous water use efficiency were not different among the plantings.The average root length and root surface area of C.lanceolata and P.bournei were higher in the mixed plantings than in their monocultures.Specifically,root surface area of C.lanceolate and both root length and surface area of P.bournei increased significantly in the 1C:3P and 2C:2P mixed plantings.Leaf,stem,root,and total dry mass per seedling for C.lanceolata decreased with its increasing percent composition in the mixed plantings,while these variables varied less for P.bournei.The plasticity of biomass allocation was relatively low for both species.Total biomass per planting was higher in the mixed plantings than in the monocultures.Our study indicates that species composition and mixing proportion can considerably affect the functional traits of C.lanceolata and P.bournei.The increase in productivity in the mixed plantings may be partially attributed to low rates of competition between the two species,and future studies should examine the different interspecies relationships.The results of this study can be used to improve plantation productivity and ultimately increase the sustainability of tree products and help to better understand the adaptation strategies of plant coexistence.

Insights into Functional Tetracycline/Antioxidant Containing Chitosan Hydrogels as Potential Bio-Active Restorative Materials: Structure, Function and Antimicrobial Activity

The human inflammatory periodontal diseases are amongst the most common of chronic diseases to affect adults. Periodontitis is regarded as “an inflammatory lesion, mediated by complex host-parasite interactions, that leads to the loss of connective tissue attachment to root surface cementum and adjacent alveolar bone”. Substantial data are available in the literature on the role of reactive oxygen species (ROS) and antioxidants in disorders such as the inflammatory diseases. However, remarkably little information is available on the periodontal diseases, which show many of the pathological features of other chronic inflammatory diseases. The periodontal tissues also provide an ideal medium within which to study mechanisms of ROS mediated tissue damage and of antioxidant defense in response to bacterial colonisation, through the non-invasive collection of GCF. The objectives of this study are to evaluate the novel chitosan based functional drug delivery systems which can be successfully incorporated into “dual action bioactive restorative materials” containing common antibiotics such as tetracycline, krill oil, aloe and aspirin as commonly used antioxidant species. Methods: The novel hydrogels will be investigated with respect to the antioxidant capacity and drug release capacity of the tetracycline from the designer drug delivery system, the use of SEM imaging for the characterization of the surfaces and reactive features of novel materials with antimicrobial potential. Results: A steady slow release of tetracycline, while maintaining antibiotic effects against the tested bacteria, for at least 10 days was shown from designer chitosan-antioxidant hydrogels. Within the limitations of the study design chitosan-antioxidant hydrogels are suitable materials for functional restorative and periodontal applications in vitro. The addition of antioxidants to the tetracycline containing prototype delivery system had a beneficial effect on the design of the hydrogel by slowing down the release of tetracycline and thereby enabling a sustainable antifungal activity over time.

Elevational patterns of functional diversity and trait of Delphinium(Ranunculaceae)in Hengduan Mountains,China

Elevational patterns of trait occurrence and functional diversity provide an important perspective for understanding biodiversity.However,previous studies have mostly examined functional diversity at the community scale.Here,we examined large-scale patterns of trait occurrence and functional diversity in Delphinium along an elevational gradient from 1000 to 5700 m in the Hengduan Mountains,SW China.Elevational distribution and trait data of 102 Delphinium species were compiled to evaluate the patterns of interspecific traits,species richness,and functional diversity.We found that the distribution of species richness showed a unimodal curve that peaked between 3500 and 4000 m;functional diversity and traits showed different patterns along an elevational gradient The functional diversity increased at a lower rate along an elevation gradient,whereas species richness continued to increase.Species with large ranges and non-endemic species were most affected by geometric constraints.Richness of species endemic to the Hengduan Mountains peaked at higher elevations,likely due to increased speciation and restricted dispersion under alpine conditions.We conclude that the middle elevation region is not only the functionally richest but also the most functionally stable region for Delphinium,which could be insurance against environmental change.Extreme conditions and strong environmental filters in an alpine environment may cause the convergence of species traits,which could relate to reducing nutrient trait investment and increasing reproductive trait investment.We conclude that large-scale studies are consistent with previous studies at the community scale.This may indicate that the relationship between functional diversity and species richness across different scales is the same.

Species spatial distributions in a warm-temperate deciduous broad-leaved forest in China

Spatial distribution is fundamental for understanding species coexistence mechanisms in forest communities.Here we comprehensively explored fine-scale spatial patterns of tree species in a secondary warm-temperate deciduous broad-leaved forest community in north China.Aggregated distribution patterns were predominant.Species functional traits had no significant effects on their spatial patterns.The aggregation intensity decreased with increasing DBH and abundance.The multivariate linear stepwise regression showed that abundance and maximum DBH were correlated with the aggregation intensity.Our results partially confirm that species attributes(abundance,DBH)and habitat heterogeneity may primarily contribute to spatial patterns and species coexistence in this secondary forest.

Forest biodiversity, relationships to structural and functional attributes, and stability in New England forests

Background： Forest biodiversity is the foundation of many ecosystem services, and the effect of biodiversity on ecosystem functioning and processes （BEF） has been a central issue in biodiversity studies. Although many hypotheses have been developed to interpret global gradients of biodiversity, there has not been complete agreement on mechanisms controlling biodiversity patterns and distributions. Differences may be due to limited observation data and inconsistencies of spatial scales in analysis. Methods： In this study, we take advantage of USDA Forest Service forest inventory and analysis （FIA） data for exploring regional forest biodiversity and BEF in New England forests. The FIA data provide detailed information of sampled plots and trees for the region, including 6000 FIA plots and more than 33,000 individual trees. Biodiversity models were used to analyze the data. Results： Tree species diversity increases from the north to the south at a rate about 2-3 species per latitudinal degree. Tree species diversity is better predicted by tree height than forest age or biomass. Very different distribution patterns of two common maple species, sugar maple （Acer sdcchorum） and red maple （Acer rubrum）, highlight the vulnerability of sugar maple and its potential replacement by red maple on New England landscapes. Red maple generally already outperforms sugar maple, and will likely and continuously benefit from a changing climate in New England. Conclusions： We conclude that forest structure （height） and resources （biomass） are more likely foundational characteristics supporting biodiversity rather than biodiversity determining forest productivity and/or biomass. The potential replacement of red maple for sugar maple in the New England areas could affect biodiversity and stability of forest ecosystem functioning because sugar maple plays important ecological roles distinct from red maple that are beneficial to other tree species in northern hardwood forests. Such a change may not affect forest resilience in terms of forest productivity and biomass as these are similar in red maple and sugar maple, however, it would almost certainly alter forest structure across the landscape.

Advances and perspectives in discovery and functional analysis of small secreted proteins in plants

Small secreted proteins(SSPs)are less than 250 amino acids in length and are actively transported out of cells through conventional protein secretion pathways or unconventional protein secretion pathways.In plants,SSPs have been found to play important roles in various processes,including plant growth and development,plant response to abiotic and biotic stresses,and beneficial plant–microbe interactions.Over the past 10 years,substantial progress has been made in the identification and functional characterization of SSPs in several plant species relevant to agriculture,bioenergy,and horticulture.Yet,there are potentially a lot of SSPs that have not been discovered in plant genomes,which is largely due to limitations of existing computational algorithms.Recent advances in genomics,transcriptomics,and proteomics research,as well as the development of new computational algorithms based on machine learning,provide unprecedented capabilities for genome-wide discovery of novel SSPs in plants.In this review,we summarize known SSPs and their functions in various plant species.Then we provide an update on the computational and experimental approaches that can be used to discover new SSPs.Finally,we discuss strategies for elucidating the biological functions of SSPs in plants.

Invasive Species <i>Echinochloa colona</i>Reduces Abundance and Diversity of Resident Plant Communities in Tropical Wetland

Although the relationship between invasive alien species (IAS) and plant community structure has attracted considerable interest, the impacts of IAS on abundance and diversity of resident plant communities in species rich-ecosystems, such as tropical wetlands are poorly understood. Consequently, this has impeded development of improved management strategies and successful restoration of invaded tropical wetlands. Therefore, data on vegetation were collected from 60 plots of 20 × 50 m to study the impacts of alien invasive grass Echinochloa colona (L.) Link abundance on plant community abundance, richness, evenness and diversity of resident plant species within grasslands of the Kilombero Valley wetland, Tanzania. Moreover, the impacts of abundance of E. colona on plant functional groups (i.e. graminoids, forbs and shrubs) richness were also explored. Generalized linear models showed that community richness, evenness, diversity and abundance of resident species were negatively related to the E. colona abundance. There was a negative relationship between richness of graminoids and shrubs and the abundance of E. colona. Similarly, the abundance of graminoids, forbs and shrubs is related negatively to the abundance of E. colona. Given that most of the community and functional group attributes of resident plants is related negatively to E. colona abundance, improved management strategies should be developed to minimize the abundance and further spread of E. colona to restore and conserve wetland biodiversity.