Background: Many tree species in tropical forests have distributions tracking local ridge-slope-valley topography. Previous work in a 50-ha plot in Korup National Park, Cameroon, demonstrated that 272 species, or 63%...Background: Many tree species in tropical forests have distributions tracking local ridge-slope-valley topography. Previous work in a 50-ha plot in Korup National Park, Cameroon, demonstrated that 272 species, or 63% of those tested, were significantly associated with topography. Methods: We used two censuses of 329,000 trees ≥1 cm dbh to examine demographic variation at this site that would account for those observed habitat preferences. We tested two predictions. First, within a given topographic habitat, species specializing on that habitat ('residents') should outperform species that are specialists of other habitats ('foreigners'). Second, across different topographic habitats, species should perform best in the habitat on which they specialize ('home') compared to other habitats ('away'). Species' performance was estimated using growth and mortality rates. Results: In hierarchical models with species identity as a random effect, we found no evidence of a demographic advantage to resident species. Indeed, growth rates were most often higher for foreign species. Similarly, comparisons of species on their home vs. away habitats revealed no sign of a performance advantage on the home habitat. Conclusions" We reject the hypothesis that species distributions along a ridge-valley catena at Korup are caused by species differences in trees _〉1 cm dbh. Since there must be a demographic cause for habitat specialization, we offer three alternatives. First, the demographic advantage specialists have at home occurs at the reproductive or seedling stage, in sizes smaller than we census in the forest plot. Second, species may have higher performance on their preferred habitat when density is low, but when population builds up, there are negative density-dependent feedbacks that reduce performance. Third, demographic filtering may be produced by extreme environmental conditions that we did not observe during the census interval.展开更多
Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocyt...Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocytes,microglia,and oligodendrocytes in the central nervous system,and satellite glial cells and Schwann cells in the peripheral nervous system.Despite the greater understanding of glial cell types and functional heterogeneity achieved through single-cell and single-nucleus RNA sequencing in animal models,few studies have investigated the transcriptomic profiles of glial cells in the human spinal cord.Here,we used high-throughput single-nucleus RNA sequencing and spatial transcriptomics to map the cellular and molecular heterogeneity of astrocytes,microglia,and oligodendrocytes in the human spinal cord.To explore the conservation and divergence across species,we compared these findings with those from mice.In the human spinal cord,astrocytes,microglia,and oligodendrocytes were each divided into six distinct transcriptomic subclusters.In the mouse spinal cord,astrocytes,microglia,and oligodendrocytes were divided into five,four,and five distinct transcriptomic subclusters,respectively.The comparative results revealed substantial heterogeneity in all glial cell types between humans and mice.Additionally,we detected sex differences in gene expression in human spinal cord glial cells.Specifically,in all astrocyte subtypes,the levels of NEAT1 and CHI3L1 were higher in males than in females,whereas the levels of CST3 were lower in males than in females.In all microglial subtypes,all differentially expressed genes were located on the sex chromosomes.In addition to sex-specific gene differences,the levels of MT-ND4,MT2A,MT-ATP6,MT-CO3,MT-ND2,MT-ND3,and MT-CO_(2) in all spinal cord oligodendrocyte subtypes were higher in females than in males.Collectively,the present dataset extensively characterizes glial cell heterogeneity and offers a valuable resource for exploring the cellular basis of spinal cordrelated illnesses,including chronic pain,amyotrophic lateral sclerosis,and multiple sclerosis.展开更多
The characteristics of seasonal variation in phytoplankton biomass and dominant species in the Changjiang River Estuary and adjacent seas were discussed based on field investigation data from 1959 to 2009. The field d...The characteristics of seasonal variation in phytoplankton biomass and dominant species in the Changjiang River Estuary and adjacent seas were discussed based on field investigation data from 1959 to 2009. The field data from 1981 to 2004 showed that the Chlorophyll-a concentration in surface seawater was between 0.4 and 8.5 ktg dm-3. The seasonal changes generally presented a bimodal trend, with the biomass peaks occurring in May and August, and Chlorophyll-a concentration was the lowest in winter. Seasonal biomass changes were mainly controlled by temperature and nutrient levels. From the end of autumn to the next early spring, phytoplankton biomass was mainly influenced by temperature, and in other seasons, nutrient level (including the nutrient supply from the terrestrial runoffs) was the major influence factor. Field investigation data from 1959 to 2009 demonstrated that dia- toms were the main phytoplankton in this area, and Skeletonerna costatum, Pseudo-nitzschia pungens, Coscinodiscus oculus-iridis, Thalassinoema nitzschioides, Paralia sulcata, Chaetoceros lorenzianus, Chaetoceros curvisetus, and Prorocentrum donghaiense Lu were common dominant species. The seasonal variations in major dominant phytoplankton species presented the following trends: 1) Skeletonema (mainly S. costatum) was dominant throughout the year; and 2) seasonal succession trends were Coscinodiscus (spring) →Chaetoceros (summer and autumn) → Coscinodiscus (winter). The annual dominance of S. costatum was attributed to its environmental eurytopicity and long standing time in surface waters. The seasonal succession of Coscinodiscus and Chaetoceros was associated with the seasonal variation in water stability and nutrient level in this area. On the other hand, long-term field data also indicated obvious interannual variation of phytoplankton biomass and community structure in the Changjiang River Estuary and adjacent seas: average annual phytoplankton biomass and dinoflagellate proportion both presented increased trends during the 1950s - 2000s.展开更多
Reproduction via cis-binary mechanisms appears to have evolved fairly early in the evolution of complex organisms, and a system committed to prior to evolution of humans. While the evolution of a chromosomal-specific ...Reproduction via cis-binary mechanisms appears to have evolved fairly early in the evolution of complex organisms, and a system committed to prior to evolution of humans. While the evolution of a chromosomal-specific approach has been a successful strategy for survival of a large variety of species including humans, the fidelity of sex determination leading to 100% cis-binary outcomes is not achieved in many species, with evidence for homosexual or bisexual behaviour evident in more than 1500 species. Thus, such outcomes indicates that sex determination is a multi-step process and not a single event, and as such, could lead to the appearance of variants during the process which developed much earlier than humans. Variants could arise either due to intrinsic variation in the steps of determination, or also be influenced by environmental factors of a biological or psychological nature. In contrast to homosexual variants which do not require interventions such as hormone therapy or surgery, expression of gender dysphoria, is more based in psychology, but also has biological underpinnings and can be influenced by such hormonal interventions and surgery. While the numbers of those with gender dysphoria is small (~0.6% - 1.0% of population), the attention given to this issue raises the possibility of biological and psychological environmental factors impacting the emergence of some of those expressing gender dysphoria. Furthermore, transitioning from male-to-female or female-to-male can have consequences regarding disease risks latter in life, including the appearance of autoimmune diseases. This review will attempt to review some of the evidence regarding sex determination, discuss why the system has potentially not been improved upon during evolution, how a potential role for sex chromosome function on neurodevelopment may be central to variation in humans, and how commitment to the current strategy is likely integrated into other sex-related events such as puberty, pregnancy, and menopause to ensure species survival. It will also discuss how variants in sex determination could contribute to sex differences in disease risk and how epigenetic modifications could play a role in such risk. .展开更多
We studied the waterbird population at Lashihai Lake, Yunnan Province, China, which is a Ramsar Site(Wetland of International Importance), to determine seasonal variation in the species composition and size of the wat...We studied the waterbird population at Lashihai Lake, Yunnan Province, China, which is a Ramsar Site(Wetland of International Importance), to determine seasonal variation in the species composition and size of the waterbird population. The study was conducted at five selected spots along Lashihai Lake at the same time each week from August 2011 to September 2013. In total, 62 waterbird species were recorded, of which 38.71%, 35.48%, 16.13%, and 9.68% were winter migrants, passage visitors, residents, and summer migrants, respectively. We found important seasonal changes in waterbird species composition and population size. Waterbird species richness was highest from September to the following April, with the total species numbers peaking in December. Total individual numbers peaked twice from late November to early December and mid-to-late February. However, waterbird species and individual numbers were comparatively lower from May to August. The change in species composition was determined by the arrival and departure dynamics of winter migrants and passage visitors. Winter migrants primarily caused the periodic changes in population size. Of concern,species and overall waterbird numbers seemed to be lower than the numbers in historical records. The decline of waterbird numbers implies that environmental changes caused by the implementation of the dam upstream of Lashihai Lake may have had adverse effects on this waterbird population. This study confirms the existence of major seasonal changes in species composition and size of the waterbird population at Lashihai Lake. Furthermore, the findings demonstrate that this wetland is of high conservation importance for waterbirds using the Central Asian–Indian and Asian–Pacific migratory routes.展开更多
The distribution featires, spotes composition and seasonal variation of halophilic Vibrios in 7 stations ofXiamen Harbor and 9 stations of the Daya Bay were studied. The counts of Vibrios were analyzed with the most p...The distribution featires, spotes composition and seasonal variation of halophilic Vibrios in 7 stations ofXiamen Harbor and 9 stations of the Daya Bay were studied. The counts of Vibrios were analyzed with the most probable number(MPN) technique. The media TCBS was used to isolate Vibrios, and API20E system employed to identifythe Vibrios. The results reveals that the density Of Vibrios in the Daya Bay ranged from 30. 0 x 105 to 2. 4 x 105 celldin-3 and the average density was 6. 61 x 103 cell·din-3, and that in Xiamen Harbor was 2. 3 x 102-2. 4 x 105 cen·din-3 and 7. 8 x 103 cell·din-3 on the average. The number of Vibrios varied seasonally with the water temperature,and was heher in the summer than in the autumn. The Vibrio species in the two bays mainly included Vibrioalginolyticus, V. parahaemolytic-us, V. fluvialis, V. vulnificus, V. mimices and V. metshnikovii and V.alginolyticus was the predominant spotes.展开更多
基金the National Institutes of Health award U01 TW03004 under the NIH-NSF-USDA funded International Cooperative Biodiversity Groups programfinancial support from the U.S. Agency for International Development’s Central Africa Regional Program for the Environment and the Smithsonian Tropical Research Institute+3 种基金Financial support for the 2008 recensus was provided by the Frank Levinson Family Foundationsupported by U.S. National Science Foundation award DEB-9806828provided by the Bioresources Development and Conservation Programme-Cameroonthe WWF Korup Project
文摘Background: Many tree species in tropical forests have distributions tracking local ridge-slope-valley topography. Previous work in a 50-ha plot in Korup National Park, Cameroon, demonstrated that 272 species, or 63% of those tested, were significantly associated with topography. Methods: We used two censuses of 329,000 trees ≥1 cm dbh to examine demographic variation at this site that would account for those observed habitat preferences. We tested two predictions. First, within a given topographic habitat, species specializing on that habitat ('residents') should outperform species that are specialists of other habitats ('foreigners'). Second, across different topographic habitats, species should perform best in the habitat on which they specialize ('home') compared to other habitats ('away'). Species' performance was estimated using growth and mortality rates. Results: In hierarchical models with species identity as a random effect, we found no evidence of a demographic advantage to resident species. Indeed, growth rates were most often higher for foreign species. Similarly, comparisons of species on their home vs. away habitats revealed no sign of a performance advantage on the home habitat. Conclusions" We reject the hypothesis that species distributions along a ridge-valley catena at Korup are caused by species differences in trees _〉1 cm dbh. Since there must be a demographic cause for habitat specialization, we offer three alternatives. First, the demographic advantage specialists have at home occurs at the reproductive or seedling stage, in sizes smaller than we census in the forest plot. Second, species may have higher performance on their preferred habitat when density is low, but when population builds up, there are negative density-dependent feedbacks that reduce performance. Third, demographic filtering may be produced by extreme environmental conditions that we did not observe during the census interval.
基金supported by the National Natural Science Foundation of China,No.82301403(to DZ)。
文摘Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocytes,microglia,and oligodendrocytes in the central nervous system,and satellite glial cells and Schwann cells in the peripheral nervous system.Despite the greater understanding of glial cell types and functional heterogeneity achieved through single-cell and single-nucleus RNA sequencing in animal models,few studies have investigated the transcriptomic profiles of glial cells in the human spinal cord.Here,we used high-throughput single-nucleus RNA sequencing and spatial transcriptomics to map the cellular and molecular heterogeneity of astrocytes,microglia,and oligodendrocytes in the human spinal cord.To explore the conservation and divergence across species,we compared these findings with those from mice.In the human spinal cord,astrocytes,microglia,and oligodendrocytes were each divided into six distinct transcriptomic subclusters.In the mouse spinal cord,astrocytes,microglia,and oligodendrocytes were divided into five,four,and five distinct transcriptomic subclusters,respectively.The comparative results revealed substantial heterogeneity in all glial cell types between humans and mice.Additionally,we detected sex differences in gene expression in human spinal cord glial cells.Specifically,in all astrocyte subtypes,the levels of NEAT1 and CHI3L1 were higher in males than in females,whereas the levels of CST3 were lower in males than in females.In all microglial subtypes,all differentially expressed genes were located on the sex chromosomes.In addition to sex-specific gene differences,the levels of MT-ND4,MT2A,MT-ATP6,MT-CO3,MT-ND2,MT-ND3,and MT-CO_(2) in all spinal cord oligodendrocyte subtypes were higher in females than in males.Collectively,the present dataset extensively characterizes glial cell heterogeneity and offers a valuable resource for exploring the cellular basis of spinal cordrelated illnesses,including chronic pain,amyotrophic lateral sclerosis,and multiple sclerosis.
基金the National Basic Research Program of China (Nos. 2001 CB409703 and 2010CB428701)the National Natural Science Foundation of China (Nos. 41140037 and 41276 069)
文摘The characteristics of seasonal variation in phytoplankton biomass and dominant species in the Changjiang River Estuary and adjacent seas were discussed based on field investigation data from 1959 to 2009. The field data from 1981 to 2004 showed that the Chlorophyll-a concentration in surface seawater was between 0.4 and 8.5 ktg dm-3. The seasonal changes generally presented a bimodal trend, with the biomass peaks occurring in May and August, and Chlorophyll-a concentration was the lowest in winter. Seasonal biomass changes were mainly controlled by temperature and nutrient levels. From the end of autumn to the next early spring, phytoplankton biomass was mainly influenced by temperature, and in other seasons, nutrient level (including the nutrient supply from the terrestrial runoffs) was the major influence factor. Field investigation data from 1959 to 2009 demonstrated that dia- toms were the main phytoplankton in this area, and Skeletonerna costatum, Pseudo-nitzschia pungens, Coscinodiscus oculus-iridis, Thalassinoema nitzschioides, Paralia sulcata, Chaetoceros lorenzianus, Chaetoceros curvisetus, and Prorocentrum donghaiense Lu were common dominant species. The seasonal variations in major dominant phytoplankton species presented the following trends: 1) Skeletonema (mainly S. costatum) was dominant throughout the year; and 2) seasonal succession trends were Coscinodiscus (spring) →Chaetoceros (summer and autumn) → Coscinodiscus (winter). The annual dominance of S. costatum was attributed to its environmental eurytopicity and long standing time in surface waters. The seasonal succession of Coscinodiscus and Chaetoceros was associated with the seasonal variation in water stability and nutrient level in this area. On the other hand, long-term field data also indicated obvious interannual variation of phytoplankton biomass and community structure in the Changjiang River Estuary and adjacent seas: average annual phytoplankton biomass and dinoflagellate proportion both presented increased trends during the 1950s - 2000s.
文摘Reproduction via cis-binary mechanisms appears to have evolved fairly early in the evolution of complex organisms, and a system committed to prior to evolution of humans. While the evolution of a chromosomal-specific approach has been a successful strategy for survival of a large variety of species including humans, the fidelity of sex determination leading to 100% cis-binary outcomes is not achieved in many species, with evidence for homosexual or bisexual behaviour evident in more than 1500 species. Thus, such outcomes indicates that sex determination is a multi-step process and not a single event, and as such, could lead to the appearance of variants during the process which developed much earlier than humans. Variants could arise either due to intrinsic variation in the steps of determination, or also be influenced by environmental factors of a biological or psychological nature. In contrast to homosexual variants which do not require interventions such as hormone therapy or surgery, expression of gender dysphoria, is more based in psychology, but also has biological underpinnings and can be influenced by such hormonal interventions and surgery. While the numbers of those with gender dysphoria is small (~0.6% - 1.0% of population), the attention given to this issue raises the possibility of biological and psychological environmental factors impacting the emergence of some of those expressing gender dysphoria. Furthermore, transitioning from male-to-female or female-to-male can have consequences regarding disease risks latter in life, including the appearance of autoimmune diseases. This review will attempt to review some of the evidence regarding sex determination, discuss why the system has potentially not been improved upon during evolution, how a potential role for sex chromosome function on neurodevelopment may be central to variation in humans, and how commitment to the current strategy is likely integrated into other sex-related events such as puberty, pregnancy, and menopause to ensure species survival. It will also discuss how variants in sex determination could contribute to sex differences in disease risk and how epigenetic modifications could play a role in such risk. .
基金funded by the“Technology Supporting Programme” of the “State Wetland Conservation Project for Lashihai Wetland”
文摘We studied the waterbird population at Lashihai Lake, Yunnan Province, China, which is a Ramsar Site(Wetland of International Importance), to determine seasonal variation in the species composition and size of the waterbird population. The study was conducted at five selected spots along Lashihai Lake at the same time each week from August 2011 to September 2013. In total, 62 waterbird species were recorded, of which 38.71%, 35.48%, 16.13%, and 9.68% were winter migrants, passage visitors, residents, and summer migrants, respectively. We found important seasonal changes in waterbird species composition and population size. Waterbird species richness was highest from September to the following April, with the total species numbers peaking in December. Total individual numbers peaked twice from late November to early December and mid-to-late February. However, waterbird species and individual numbers were comparatively lower from May to August. The change in species composition was determined by the arrival and departure dynamics of winter migrants and passage visitors. Winter migrants primarily caused the periodic changes in population size. Of concern,species and overall waterbird numbers seemed to be lower than the numbers in historical records. The decline of waterbird numbers implies that environmental changes caused by the implementation of the dam upstream of Lashihai Lake may have had adverse effects on this waterbird population. This study confirms the existence of major seasonal changes in species composition and size of the waterbird population at Lashihai Lake. Furthermore, the findings demonstrate that this wetland is of high conservation importance for waterbirds using the Central Asian–Indian and Asian–Pacific migratory routes.
文摘The distribution featires, spotes composition and seasonal variation of halophilic Vibrios in 7 stations ofXiamen Harbor and 9 stations of the Daya Bay were studied. The counts of Vibrios were analyzed with the most probable number(MPN) technique. The media TCBS was used to isolate Vibrios, and API20E system employed to identifythe Vibrios. The results reveals that the density Of Vibrios in the Daya Bay ranged from 30. 0 x 105 to 2. 4 x 105 celldin-3 and the average density was 6. 61 x 103 cell·din-3, and that in Xiamen Harbor was 2. 3 x 102-2. 4 x 105 cen·din-3 and 7. 8 x 103 cell·din-3 on the average. The number of Vibrios varied seasonally with the water temperature,and was heher in the summer than in the autumn. The Vibrio species in the two bays mainly included Vibrioalginolyticus, V. parahaemolytic-us, V. fluvialis, V. vulnificus, V. mimices and V. metshnikovii and V.alginolyticus was the predominant spotes.