In order to provide reference for the breeding of new peanut varieties and introduction of peanut cultivars in Fujian Province, the pedigree and trait evolution of 33 peanut varieties registered (certified, identifie...In order to provide reference for the breeding of new peanut varieties and introduction of peanut cultivars in Fujian Province, the pedigree and trait evolution of 33 peanut varieties registered (certified, identified) during 1949-2011 in Fujian Province were analyzed. Results showed that, 45 parents were used as parents for peanut breeding, and 22 parents were originated from Fujian Province, 24 parents were registered varieties; Shitouqi, Yueyou 92, Shanyou 523, Quanhua No.10 and Quanhua 327 were milestone parents of peanut varieties in Fujian Province, and the phylogenetic relationship of varieties mainly came from Guangdong. Systematic se- lection was the main breeding method during 1951-1980 in Fujian Province, while crossbreeding became the main method of peanut breeding since 1991. With the variety update of peanuts, the yield levels were constantly increasing. The gradual increase of 100-pod weight and 100-kernel weight played an important role in the improvement of peanut yield. Fat content increased slightly with time, while protein content changed in contrast. Plant height was gradually decreased, and anti-lodging and fertilizer-tolerance capacity was improved, which were suitable for close planting. The total number of branches was decreased slightly, while the number of bearing branches barely changed.展开更多
Spiders are among the most varied terrestrial predators,with highly diverse morphology,ecology,and behavior.Morphological and molecular data have greatly contributed to advances in the phylogeny and evolutionary dynam...Spiders are among the most varied terrestrial predators,with highly diverse morphology,ecology,and behavior.Morphological and molecular data have greatly contributed to advances in the phylogeny and evolutionary dynamics of spiders.Here,we performed comprehensive mitochondrial phylogenomics analysis on 78 mitochondrial genomes(mitogenomes)representing 29 families;of these,23 species from eight families were newly generated.Mesothelae retained the same gene arrangement as the arthropod ancestor(Limulus polyphemus),while Opisthothelae showed extensive rearrangement,with 12 rearrangement types in transfer RNAs(tRNAs)and control region.Most spider tRNAs were extremely truncated and lacked typical dihydrouridine or TΨC arms,showing high tRNA structural diversity;in particular,trnS1 exhibited anticodon diversity across the phylogeny.The evolutionary rates of mitochondrial genes were potentially associated with gene rearrangement or truncated tRNAs.Both mitogenomic sequences and rearrangements possessed phylogenetic characteristics,providing a robust backbone for spider phylogeny,as previously reported.The monophyly of suborder,infraorder,retrolateral tibial apophysis clade,and families(except for Pisauridae)was separately supported,and high-level relationships were resolved as(Mesothelae,(Mygalomorphae,(Entelegynae,(Synspermiata,Hypochilidae)))).The phylogenetic positions of several families were also resolved(e.g.,Eresidae,Oecobiidae and Titanoecidae).Two reconstructions of ancestral web type obtained almost identical results,indicating that the common ancestor of spiders likely foraged using a silk-lined burrow.This study,the largest mitochondrial phylogenomics analysis of spiders to date,highlights the usefulness of mitogenomic data not only for providing efficient phylogenetic signals for spider phylogeny,but also for characterizing trait diversification in spider evolution.展开更多
In this brief report, we analyzed ecological correlates of risk of extinction for mammals endemic to China using phylogenetic eigenvector methods to control for the effect of phylogenetic inertia. Extinction risks wer...In this brief report, we analyzed ecological correlates of risk of extinction for mammals endemic to China using phylogenetic eigenvector methods to control for the effect of phylogenetic inertia. Extinction risks were based on the International Union for Conservation of Nature (IUCN) Red List and ecological explanatory attributes that include range size and climatic variables. When the effect of phylogenetic inertia were controlled, climate became the best predictor for quantifying and evaluating extinction risks of endemic mammals in China, accounting for 13% of the total variation. Range size seems to play a trivial role, explaining -1% of total variation; however, when non-phylogenetic variation partitioning analysis was done, the role of range size then explained 7.4% of total variation. Consequently, phylogenetic inertia plays a substantial role in increasing the explanatory power of range size on the extinction risks of mammals endemic to China. Limitations of the present study are discussed, with a focus on under-represented sampling of endemic mammalian species.展开更多
Trade-offs between performance and tolerance of abiotic and biotic stress have been proposed to explain both the success of invasive species and frequently observed size differences between native and introduced popul...Trade-offs between performance and tolerance of abiotic and biotic stress have been proposed to explain both the success of invasive species and frequently observed size differences between native and introduced populations.Canada thistle seeds collected from across the introduced North American and the native European range were grown in benign and stressful conditions(nutrient stress,shading,simulated herbivory,drought,and mowing),to evaluate whether native and introduced individuals differ in performance or stress tolerance.An additional experiment assessed the strength of maternal effects by comparing plants derived from field-collected seeds with those derived from clones grown in the glasshouse.Introduced populations tended to be larger in size,but no trade-off of stress tolerance with performance was detected;introduced populations had either superior performance or equivalent trait values and survivorship in the treatment common gardens.We also detected evidence of parallel latitudinal clines of some traits in both the native and introduced ranges and associations with climate variables in some treatments,consistent with recent climate adaptation within the introduced range.Our results are consistent with rapid adaptation of introduced populations,but,contrary to predictions,the evolution of invasive traits did not come at the cost of reduced stress tolerance.展开更多
基金Supported by Science and Technology Spark Program of Fujian Province(2010S0018)Putian Science and Technology Project of Fujian Province(2012N05)~~
文摘In order to provide reference for the breeding of new peanut varieties and introduction of peanut cultivars in Fujian Province, the pedigree and trait evolution of 33 peanut varieties registered (certified, identified) during 1949-2011 in Fujian Province were analyzed. Results showed that, 45 parents were used as parents for peanut breeding, and 22 parents were originated from Fujian Province, 24 parents were registered varieties; Shitouqi, Yueyou 92, Shanyou 523, Quanhua No.10 and Quanhua 327 were milestone parents of peanut varieties in Fujian Province, and the phylogenetic relationship of varieties mainly came from Guangdong. Systematic se- lection was the main breeding method during 1951-1980 in Fujian Province, while crossbreeding became the main method of peanut breeding since 1991. With the variety update of peanuts, the yield levels were constantly increasing. The gradual increase of 100-pod weight and 100-kernel weight played an important role in the improvement of peanut yield. Fat content increased slightly with time, while protein content changed in contrast. Plant height was gradually decreased, and anti-lodging and fertilizer-tolerance capacity was improved, which were suitable for close planting. The total number of branches was decreased slightly, while the number of bearing branches barely changed.
基金supported by the Second Tibetan Plateau Scientific Expedition and Research(STEP)Program(2019QZKK0302)Natural Science Foundation of Gansu Province(20JR5RA252)Innovation and Entrepreneurship Project of Lanzhou University(20210010020,20210010002)。
文摘Spiders are among the most varied terrestrial predators,with highly diverse morphology,ecology,and behavior.Morphological and molecular data have greatly contributed to advances in the phylogeny and evolutionary dynamics of spiders.Here,we performed comprehensive mitochondrial phylogenomics analysis on 78 mitochondrial genomes(mitogenomes)representing 29 families;of these,23 species from eight families were newly generated.Mesothelae retained the same gene arrangement as the arthropod ancestor(Limulus polyphemus),while Opisthothelae showed extensive rearrangement,with 12 rearrangement types in transfer RNAs(tRNAs)and control region.Most spider tRNAs were extremely truncated and lacked typical dihydrouridine or TΨC arms,showing high tRNA structural diversity;in particular,trnS1 exhibited anticodon diversity across the phylogeny.The evolutionary rates of mitochondrial genes were potentially associated with gene rearrangement or truncated tRNAs.Both mitogenomic sequences and rearrangements possessed phylogenetic characteristics,providing a robust backbone for spider phylogeny,as previously reported.The monophyly of suborder,infraorder,retrolateral tibial apophysis clade,and families(except for Pisauridae)was separately supported,and high-level relationships were resolved as(Mesothelae,(Mygalomorphae,(Entelegynae,(Synspermiata,Hypochilidae)))).The phylogenetic positions of several families were also resolved(e.g.,Eresidae,Oecobiidae and Titanoecidae).Two reconstructions of ancestral web type obtained almost identical results,indicating that the common ancestor of spiders likely foraged using a silk-lined burrow.This study,the largest mitochondrial phylogenomics analysis of spiders to date,highlights the usefulness of mitogenomic data not only for providing efficient phylogenetic signals for spider phylogeny,but also for characterizing trait diversification in spider evolution.
基金This work was supported by the China Scholarship Council (CSC)(201308180004) Acknowledgements: I would like to thank two anonymous reviewers for constructive comments on this manuscript.
文摘In this brief report, we analyzed ecological correlates of risk of extinction for mammals endemic to China using phylogenetic eigenvector methods to control for the effect of phylogenetic inertia. Extinction risks were based on the International Union for Conservation of Nature (IUCN) Red List and ecological explanatory attributes that include range size and climatic variables. When the effect of phylogenetic inertia were controlled, climate became the best predictor for quantifying and evaluating extinction risks of endemic mammals in China, accounting for 13% of the total variation. Range size seems to play a trivial role, explaining -1% of total variation; however, when non-phylogenetic variation partitioning analysis was done, the role of range size then explained 7.4% of total variation. Consequently, phylogenetic inertia plays a substantial role in increasing the explanatory power of range size on the extinction risks of mammals endemic to China. Limitations of the present study are discussed, with a focus on under-represented sampling of endemic mammalian species.
基金supported by grants(PBZHP3-123301 and PA00P3_134180)from the Swiss National Science Foundation to A.G.from the Natural Sciences and Engineering Research Council of Canada Awards(327475 and 353026)to L.H.R.
文摘Trade-offs between performance and tolerance of abiotic and biotic stress have been proposed to explain both the success of invasive species and frequently observed size differences between native and introduced populations.Canada thistle seeds collected from across the introduced North American and the native European range were grown in benign and stressful conditions(nutrient stress,shading,simulated herbivory,drought,and mowing),to evaluate whether native and introduced individuals differ in performance or stress tolerance.An additional experiment assessed the strength of maternal effects by comparing plants derived from field-collected seeds with those derived from clones grown in the glasshouse.Introduced populations tended to be larger in size,but no trade-off of stress tolerance with performance was detected;introduced populations had either superior performance or equivalent trait values and survivorship in the treatment common gardens.We also detected evidence of parallel latitudinal clines of some traits in both the native and introduced ranges and associations with climate variables in some treatments,consistent with recent climate adaptation within the introduced range.Our results are consistent with rapid adaptation of introduced populations,but,contrary to predictions,the evolution of invasive traits did not come at the cost of reduced stress tolerance.