In this article, using the likelihood score theory extended to nuisance parameters we derive a new homogeneity score test for comparing linkage disequilibrium across several strata. Power and sample size formulae are...In this article, using the likelihood score theory extended to nuisance parameters we derive a new homogeneity score test for comparing linkage disequilibrium across several strata. Power and sample size formulae are also obtained.展开更多
Transmission disequilibrium test (TDT) is a popular family based genetic association method. Under multiplicative assumption, a conditional logistic regression for matched pair, affected offspring with allele transmit...Transmission disequilibrium test (TDT) is a popular family based genetic association method. Under multiplicative assumption, a conditional logistic regression for matched pair, affected offspring with allele transmitted from parents and pseudo-offspring (control) with allele non-transmitted from parents, was built to detect the <span style="font-family:Verdana;">main </span><span style="font-family:Verdana;">effects of genes and gene-covariate interaction</span><span style="font-family:Verdana;">s</span><span style="font-family:;" "=""><span style="font-family:Verdana;">. When there exist genotype uncertainties, expectation-maximization (EM) algorithm was adopted to estimate the coefficients. The transmission model was applied to detect the association between M235T polymorphism in AGT gene and essential hypertension (ESH). Most of parents are not available in the 126 families from HongKong Chinese population. The results </span><span style="font-family:Verdana;">showed M235T is associat</span></span><span style="font-family:Verdana;">ed</span><span style="font-family:Verdana;"> with hypertension and there is interaction between M235T and the case’s sex. The allele T is higher risk for male than female</span><span style="font-family:Verdana;">.</span>展开更多
基金The NNSF （10371015, 10329102） of China, and the Science Foundation （20060101） for Young Teachers of Northeast Normal University.
文摘In this article, using the likelihood score theory extended to nuisance parameters we derive a new homogeneity score test for comparing linkage disequilibrium across several strata. Power and sample size formulae are also obtained.
文摘Transmission disequilibrium test (TDT) is a popular family based genetic association method. Under multiplicative assumption, a conditional logistic regression for matched pair, affected offspring with allele transmitted from parents and pseudo-offspring (control) with allele non-transmitted from parents, was built to detect the <span style="font-family:Verdana;">main </span><span style="font-family:Verdana;">effects of genes and gene-covariate interaction</span><span style="font-family:Verdana;">s</span><span style="font-family:;" "=""><span style="font-family:Verdana;">. When there exist genotype uncertainties, expectation-maximization (EM) algorithm was adopted to estimate the coefficients. The transmission model was applied to detect the association between M235T polymorphism in AGT gene and essential hypertension (ESH). Most of parents are not available in the 126 families from HongKong Chinese population. The results </span><span style="font-family:Verdana;">showed M235T is associat</span></span><span style="font-family:Verdana;">ed</span><span style="font-family:Verdana;"> with hypertension and there is interaction between M235T and the case’s sex. The allele T is higher risk for male than female</span><span style="font-family:Verdana;">.</span>
