A two-dimensional generalized Langevin equation is proposed to describe the protein conformational change, compatible to the electron transfer process governed by atomic packing density model. We assume a fractional G...A two-dimensional generalized Langevin equation is proposed to describe the protein conformational change, compatible to the electron transfer process governed by atomic packing density model. We assume a fractional Gaussian noise and a white noise through bond and through space coordinates respectively, and introduce the coupling effect coming from both fluctuations and equilibrium variances. The general expressions for autocorrelation functions of distance fluctuation and fluorescence lifetime variation are derived, based on which the exact conformational change dynamics can be evaluated with the aid of numerical Laplace inversion technique. We explicitly elaborate the short time and long time approximations. The relationship between the two-diraensional description and the one-dimensional theory is also discussed.展开更多
Two-dimensional(2D)organic nanomaterials are attracting increasing research interest and expected to be the ideal candidate for futureproofed flexible electronics and biotechnologies.Owing to the complex molecular str...Two-dimensional(2D)organic nanomaterials are attracting increasing research interest and expected to be the ideal candidate for futureproofed flexible electronics and biotechnologies.Owing to the complex molecular structures and multiple intermolecular interactions in organic systems,deeper understanding of rational molecular design and assembly principles is urgently required.In this review,a collection of molecular packing mode in the 2D organic nanomaterials via supramolecular assembly is presented,so as to help explicit the relationship among molecular structures,supramolecular interactions and molecular packing motifs in 2D assembly systems.We also provide a rational and accessible schematic model to demonstrate several typical kinds of molecular packing motifs for the prediction of the 2D morphology.展开更多
As FlexRay communication protocol is extensively used in distributed real-time applications on vehicles, signal scheduling in Flex Ray network becomes a critical issue to ensure the safe and efficient operation of tim...As FlexRay communication protocol is extensively used in distributed real-time applications on vehicles, signal scheduling in Flex Ray network becomes a critical issue to ensure the safe and efficient operation of time-critical applications. In this study, we propose a rectangle bin packing optimization approach to schedule communication signals with timing constraints into the FlexRay static segment at minimum bandwidth cost. The proposed approach, which is based on integer linear programming(ILP), supports both the slot assignment mechanisms provided by the latest version of the FlexRay specification, namely, the single sender slot multiplexing, and multiple sender slot multiplexing mechanisms. Extensive experiments on a synthetic and an automotive X-by-wire system case study demonstrate that the proposed approach has a well optimized performance.展开更多
The investigation of the problem of particle packing has provided basic insights into the structure,symmetry,and physical properties of condensed matter.Dense packings of non-spherical particles have many applications...The investigation of the problem of particle packing has provided basic insights into the structure,symmetry,and physical properties of condensed matter.Dense packings of non-spherical particles have many applications,both in research and industry.We report the two-dimensional dense packing patterns of bending and assembled rods,which are non-convexly deformed from simple objects and modeled as entangled particles.Monte Carlo simulations and further analytical constructions are carried out to explore possible densely packed structures.Two typical densely packed structures of C-bending rods are found,and their packing densities are identified as being functions of the aspect ratio and central angle.Six shapes of assembled rods,representing the combined deformations of rods,are employed in simulations with the packing structures classified into three types.The dense packing density of each packing pattern is derived as a function of different shape parameters.In contrast with the case of disordered packings,both the shape and order are verified to affect the packing density.展开更多
基金This work was supported by the National Natural Science Foundation of China （No.20973119 and No.21033008）.
文摘A two-dimensional generalized Langevin equation is proposed to describe the protein conformational change, compatible to the electron transfer process governed by atomic packing density model. We assume a fractional Gaussian noise and a white noise through bond and through space coordinates respectively, and introduce the coupling effect coming from both fluctuations and equilibrium variances. The general expressions for autocorrelation functions of distance fluctuation and fluorescence lifetime variation are derived, based on which the exact conformational change dynamics can be evaluated with the aid of numerical Laplace inversion technique. We explicitly elaborate the short time and long time approximations. The relationship between the two-diraensional description and the one-dimensional theory is also discussed.
基金the National Natural Science Foundation of China(61604081)Excellent science and technology innovation team of Jiangsu Higher Education Institutions(2013),Natural Science Foundation of Jiangsu Provinee,China(BM2012010)+2 种基金the Six Talent Peaks Project of Jiangsu Province(XCL-CXTD-009)Project funded by the Priority Academic Program Development of Jiangsu Higher Education Institutions,PAPD(YX03002)the Funding of Jiangsu Innovation Program for Graduate Education(46030CX17758).
文摘Two-dimensional(2D)organic nanomaterials are attracting increasing research interest and expected to be the ideal candidate for futureproofed flexible electronics and biotechnologies.Owing to the complex molecular structures and multiple intermolecular interactions in organic systems,deeper understanding of rational molecular design and assembly principles is urgently required.In this review,a collection of molecular packing mode in the 2D organic nanomaterials via supramolecular assembly is presented,so as to help explicit the relationship among molecular structures,supramolecular interactions and molecular packing motifs in 2D assembly systems.We also provide a rational and accessible schematic model to demonstrate several typical kinds of molecular packing motifs for the prediction of the 2D morphology.
基金supported by the Program for Changjiang Scholars and Innovative Research Team in the University of Ministry of Education of China(No.IRT1017)
文摘As FlexRay communication protocol is extensively used in distributed real-time applications on vehicles, signal scheduling in Flex Ray network becomes a critical issue to ensure the safe and efficient operation of time-critical applications. In this study, we propose a rectangle bin packing optimization approach to schedule communication signals with timing constraints into the FlexRay static segment at minimum bandwidth cost. The proposed approach, which is based on integer linear programming(ILP), supports both the slot assignment mechanisms provided by the latest version of the FlexRay specification, namely, the single sender slot multiplexing, and multiple sender slot multiplexing mechanisms. Extensive experiments on a synthetic and an automotive X-by-wire system case study demonstrate that the proposed approach has a well optimized performance.
基金the National Natural Science Foundation of China(Nos.11602088,11672110 and 11472110)Natural Science Foundation of Guangdong Province(No.2017A030313014)+1 种基金the opening project of the State Key Lab-oratory for Strength and Vibration of Mechanical Structures(Xi'an Jiaotong University)(Nos.SV2018-KF-33 and SV2017-KF-04)Fundamental Research Funds for the Central Universities(Nos.2017BQ094 and 2018PY21).
文摘The investigation of the problem of particle packing has provided basic insights into the structure,symmetry,and physical properties of condensed matter.Dense packings of non-spherical particles have many applications,both in research and industry.We report the two-dimensional dense packing patterns of bending and assembled rods,which are non-convexly deformed from simple objects and modeled as entangled particles.Monte Carlo simulations and further analytical constructions are carried out to explore possible densely packed structures.Two typical densely packed structures of C-bending rods are found,and their packing densities are identified as being functions of the aspect ratio and central angle.Six shapes of assembled rods,representing the combined deformations of rods,are employed in simulations with the packing structures classified into three types.The dense packing density of each packing pattern is derived as a function of different shape parameters.In contrast with the case of disordered packings,both the shape and order are verified to affect the packing density.
