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Phytochemicals of Aloe barbadensis miller as Potential Inhibitors of Uropathogenic Escherichia coli for Urinary Tract Infection Therapy: An in Silico Approach
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作者 Mikidadi Salehe Gurisha Pulapa Venkata Kanaka Rao Laxmikanth Cherupally 《Open Journal of Biophysics》 2024年第2期99-120,共22页
Urinary tract infections (UTIs) are common infections caused by normal skin or rectum bacteria that get into the urethra and infect the urinary tract. Although the infection can affect various parts of the tract, blad... Urinary tract infections (UTIs) are common infections caused by normal skin or rectum bacteria that get into the urethra and infect the urinary tract. Although the infection can affect various parts of the tract, bladder infections are the most prevalent kind. Uropathogenic Escherichia Coli (UPEC) is the most common pathogen associated with UTI development. Therefore, inhibiting the UPEC protein target (PDB ID: 8BVD) appears to be a promising therapeutic strategy. Therefore, in this study, molecular docking and dynamics were conducted to examine the antibacterial activity of Aloe barbadensis miller against UPEC bacteria. The Aloe barbadensis miller natural compounds licochalcone A, palmidin B and palmidin C were downloaded from PubChem with amoxicillin, which was used as a control drug and studied against the target molecule. The potential parameters examined were the docking scores, absorption, distribution, metabolism, excretion, toxicity (ADMET), bioavailability, root mean square deviation (RMSD), root mean square fluctuation (RMSF), hydrogen bonding, radius of gyration, and potential energy of the system. Docking scores showed that all ligands demonstrated an admirable candidature as an inhibitor to 8BVD molecule, and the score hierarchy is licochalcone A (-6.4 kcal/mol), palmidin C (-6.1 kcal/mol), palmidin B (-6.0 kcal/mol), and amoxicillin (-5.9 kcal/mol). All ligands appeared to have good drug-like properties and oral bioavailability. Molecular dynamic studies showed that all ligands exhibited an excellent nominee as inhibitors in their vicinity at 20 ns. However, there is a relatively high fluctuation of palmidin B compared with other compounds, which seems to be more stable. This work suggests that the selected phytoconstituents could be used as inhibitors of the 8BVD protein in the fight against UTIs. However, further investigation on the clinical and experimental validation of UTI treatment’s specific mechanisms and effects is still welcomed. 展开更多
关键词 uropathogenic Escherichia Coli PHYTOCHEMICALS Molecular Docking LIGAND Hydrogen Bond
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Prevalence and Associated Risk Factors of Uropathogenic Klebsiella Species in Port Harcourt
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作者 Moore Ikechi Mike-Ogburia Tombari Pius Monsi Easter Godwin Nwokah 《Advances in Infectious Diseases》 2023年第2期333-353,共21页
Background: Urinary tract infection (UTI) is a severe public health issue that affects a wide range of people around the world with Klebsiella pneumoniae accounting for up to 25% of all urinary tract infections. The h... Background: Urinary tract infection (UTI) is a severe public health issue that affects a wide range of people around the world with Klebsiella pneumoniae accounting for up to 25% of all urinary tract infections. The higher rate of UTI associated with uropathogenic Klebsiella species has been associated with the emergence of hypervirulent and antibiotic-resistant strains facilitated by the misuse and overuse of antibiotics as well as other sociodemographic and behavioural practices of susceptible individuals. This study was aimed at investigating the prevalence and associated risk factors of uropathogenic Klebsiella species in Port Harcourt, Nigeria. Methodology: The study employed a descriptive cross-sectional study design comprising 300 subjects clinically suspected of having urinary tract infections attending the Rivers State University Medical Centre and the Rivers State University Teaching Hospital between March to August 2022. A standard urine culture procedure was used to ascertain significant bacteriuria after which Klebsiella colonies were isolated and identified using standard bacteriological techniques. The data generated from this study was represented as frequency and percentages, and inferential statistics were carried out using Chi-square with the aid of GraphPad Prism Software Version 9. Statistical significance was defined as a p-value of less than 0.05 at a 95% confidence interval. Result: The prevalence of uropathogenic Klebsiella sp. was 16%, with sex, pregnancy status, and religion of the individuals substantially linked (p p Klebsiella species. Conclusion: This study reports a relatively high prevalence of uropathogenic Klebsiella species at 16%, with the sex and pregnancy status of the subjects being significantly associated (p Klebsiella species in the current study. Health promotion and awareness efforts should be prioritised to inform susceptible demographics about their risks for urinary tract infections associated with uropathogenic Klebsiella species via targeted educational campaigns, collaboration with healthcare providers, use of social media and online platforms, workplace wellness programs, and community outreach programs amongst others. Antimicrobial susceptibility testing before prescriptions and treatment should be emphasized and upheld in all clinical settings. 展开更多
关键词 uropathogenic UTI KLEBSIELLA PREVALENCE Risk Factors
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Prevalence of Uropathogenic Escherichia coli among Adult Male Patients 40 Years and above with Haematuria and Impaired Kidney Attending General Hospitals in Benue State
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作者 Cornelius Iwodi Grace M. Gberikon +1 位作者 Innocent Okonkwo Ogbonna Emmanuel O. Agada 《Advances in Microbiology》 2023年第12期588-601,共14页
Haematuria is the presence of red blood cells in urine. It is most often caused by urinary tract infections of which Escherichia coli is frequently implicated. Impairment of kidney functions could occur as a result of... Haematuria is the presence of red blood cells in urine. It is most often caused by urinary tract infections of which Escherichia coli is frequently implicated. Impairment of kidney functions could occur as a result of infection or other complications of the kidney. The aim of the study was to determine the prevalence of uropathogenic Escherichia coli among adult male patients with haematuria and impaired kidneys attending a general hospital in Benue state. Three hundred and sixty-eight (368) samples of urine were collected from 368 male patients (≥ 40 years) attending the 23 general hospitals in Benue state. Each of the urine samples was divided into two parts for haematuria and isolation and identification of Escherichia coli. Blood samples (368) were also collected from the patients and used for quantitative determination of creatinine and estimation of glomerular filtration rate. The presence of haematuria was 45.1% and ranges from 12.5% to 100%. Prevalence of haematuria with respect to age shows that patients within the age group of 90 - 99 years had the highest rate (100%) and the least were those within the ages of 40 - 49 years (20.0%). Isolation rate of uropathogenic Escherichia coli was 16.3% and ranged from 6.3 to 37.5%. Patients within the age group of 90 - 99 years had the highest elevated impaired renal function of 4 (80%), followed by patients within the ages of 80 - 89 years [17 (77.3%)] and the lowest were those within the ages of 40 - 49 [6 (10.0%)]. The overall presence of haematuria in the patients was high (45.1%) with similar high Escherichia coli isolation rate and impaired renal function which could mean that acute or chronic kidney disease may set in. 展开更多
关键词 UROPATHOGENS HAEMATURIA Escherichia coli General Hospital Impaired Kidney Function
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Regulation of fim genes in uropathogenic Escherichia coli 被引量:2
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作者 William R Schwan 《World Journal of Clinical Infectious Diseases》 2011年第1期17-25,共9页
Uropathogenic Escherichia coli(UPEC)is the leading cause of urinary tract infections in women,causing significant morbidity and mortality in this population.Adherence to host epithelial cells is a pivotal step in the ... Uropathogenic Escherichia coli(UPEC)is the leading cause of urinary tract infections in women,causing significant morbidity and mortality in this population.Adherence to host epithelial cells is a pivotal step in the pathogenesis of UPEC.One of the most important virulence factors involved in mediating this attachment is the type 1 pilus(type 1 fimbria)encoded by a set of fim genes arranged in an operon.The expression of type 1 pili is controlled by a phenomenon known as phase variation,which reversibly switches between the expression of type 1 pili(Phase-ON)and loss of expression(Phase-OFF).Phase-ON cells have the promoter for the fimA structural gene on an invertible DNA element called fimS,which lines up to allow transcription,whereas transcription of the structural gene is silenced in Phase-OFF cells.The orientation of the fimS invertible element is controlled by two site-specific recombinases,FimB and FimE.Environmental conditions cause transcriptional and post-transcriptional changes in UPEC cells that affect the level of regulatory proteins,which in turn play vital roles in modulating this phase switching ability.The role of fim gene regulation in UPEC pathogenesis will be discussed. 展开更多
关键词 TYPE 1 FIMBRIAE TYPE 1 PILI Gene REGULATION uropathogenic ESCHERICHIA coli Urinary TRACT
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Inhibitory Activities of Lactic Acid Bacteria against Multi-Drug Resistant Uropathogenic <i>Staphylococcus saprophyticus</i>Isolated from Symptomatic Women in Lagos, Nigeria 被引量:1
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作者 Tajudeen Akanji Bamidele Felix Oluwasegun Alao +2 位作者 Victorious Chisom Ekeh Muinah Adenike Fowora Bolanle Alake Adeniyi 《Advances in Microbiology》 2020年第8期375-382,共8页
<span style="font-family:;" "=""><span style="font-family:Verdana;">The uropathogenic </span><i><span style="font-family:Verdana;">Staphylococ... <span style="font-family:;" "=""><span style="font-family:Verdana;">The uropathogenic </span><i><span style="font-family:Verdana;">Staphylococcus</span></i></span><i><span style="font-family:;" "=""> </span></i><i><span style="font-family:Verdana;">saprophyticus</span></i><span style="font-family:;" "=""><span style="font-family:Verdana;"> is reported severally to be resistant to the drugs often used empirically for treatment of urinary tract infections (UTIs). Their ability to exhibit resistance to multiple drugs is a great de</span><span style="font-family:Verdana;">al of threat to successes recorded in the management of UTIs cause</span><span style="font-family:Verdana;">d by this pathogen. Lactic acid bacteria (LAB) have been demonstrated to exhibit an</span><span style="font-family:Verdana;">timicrobial activities but studies about their prospect against multi</span><span style="font-family:Verdana;">-drug resistant </span><i><span style="font-family:Verdana;">S.</span></i> <i><span style="font-family:Verdana;">saprophyticus</span></i><span style="font-family:Verdana;"> are quite few. This study therefore investigated acti</span><span><span style="font-family:Verdana;">vities of LAB against the multi-drug resistant </span><i><span style="font-family:Verdana;">S</span></i><span style="font-family:Verdana;">. </span><i><span style="font-family:Verdana;">saprophyticus</span></i><span style="font-family:Verdana;"> recover</span></span><span style="font-family:Verdana;">ed fro</span><span style="font-family:Verdana;">m urine samples of symptomatic women. The three differ</span><span style="font-family:Verdana;">ent species of LAB </span><span><span style="font-family:Verdana;">(</span><i><span style="font-family:Verdana;">Lactobacillus</span></i></span></span><i><span style="font-family:;" "=""> </span></i><i><span style="font-family:Verdana;">fermentum</span></i><span style="font-family:;" "=""><span style="font-family:Verdana;"> BTA 62, </span><i><span style="font-family:Verdana;">Lactobacillus</span></i></span><i><span style="font-family:;" "=""> </span></i><i><span style="font-family:Verdana;">johnsonii</span></i><span style="font-family:;" "=""><span style="font-family:Verdana;"> BTA 86 and </span><i><span style="font-family:Verdana;">Weis</span></i></span><i><span style="font-family:Verdana;">sella</span></i><i><span style="font-family:;" "=""> </span></i><i><span style="font-family:Verdana;">confusa</span></i><span style="font-family:Verdana;"> BTA 40) previously isolated and identified by 16S rRNA s</span><span style="font-family:;" "=""><span style="font-family:Verdana;">e</span><span style="font-family:Verdana;">quencing were selected based on their history of antimicrobial activities. Their</span><span style="font-family:Verdana;"> m</span><span style="font-family:Verdana;">etabolites were employed in the antagonistic assays against six (6) mu</span><span style="font-family:Verdana;">lti-drug resista</span><span style="font-family:Verdana;">nt test pathogens recovered fro</span><span style="font-family:Verdana;">m urine samples of symptomatic, non-pregnant women attending clinics in Lagos, Nigeria and the control (</span><i><span style="font-family:Verdana;">S</span></i><span style="font-family:Verdana;">. </span><i><span style="font-family:Verdana;">saprophyticus</span></i><span style="font-family:Verdana;"> subs bovis strain DSM 18669) following standard procedures. </span><span style="font-family:Verdana;">The pathogens showed resistances to almost all the antibiotics except</span><span style="font-family:Verdana;"> levofloxaci</span><span style="font-family:Verdana;">n, ciprofloxacin, imipenem while the control showed resistance to thr</span><span style="font-family:Verdana;">ee. The LAB, </span><i><span style="font-family:Verdana;">L.</span></i></span><i><span style="font-family:;" "=""> </span></i><i><span style="font-family:Verdana;">fermentum</span></i><span style="font-family:;" "=""><span style="font-family:Verdana;"> inhibited five (83.3%) of the pathogens with zone diameter of 12 - 17 mm, followed by </span><i><span style="font-family:Verdana;">W</span></i><span style="font-family:Verdana;">. </span><i><span style="font-family:Verdana;">confusa</span></i><span style="font-family:Verdana;"> inhibiting three (50%) with 15 - 17 mm. </span><i><span style="font-family:Verdana;">Lactobacillus</span></i></span><i><span style="font-family:;" "=""> </span></i><i><span style="font-family:Verdana;">johnsonii</span></i><span style="font-family:;" "=""><span style="font-family:Verdana;"> on the other hand, inhibited a pathogen and the control with zones of 13 mm and 14 mm respectively. In conclusion, the extracted metabolites of LAB inhibited the growth of multi-drug resistant clinical isolates of uropathogenic </span><i><span style="font-family:Verdana;">S</span></i><span style="font-family:Verdana;">. </span><i><span style="font-family:Verdana;">saprophyticus</span></i><span style="font-family:Verdana;"> and may therefore be potent alternatives to antibiotics.</span></span> 展开更多
关键词 INHIBITORY Lactic Acid Bacteria Resistant uropathogenic SYMPTOMATIC
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Prevalence of multi-drug resistant uropathogenic Escherichia coli in Potohar region of Pakistan
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作者 Ihsan Ali Zara Rafaque +2 位作者 Safia Ahmed Sajid Malik Javid Iqbal Dasti 《Asian Pacific Journal of Tropical Biomedicine》 SCIE CAS 2016年第1期60-66,共7页
Objective:To scrutinize patterns of multi-drug-resistant uropathogenic Escherichia coli(UPEC) strains and particularly of fluoroquinolone-resistance this is an alternative choice for the treatment of urinary tract inf... Objective:To scrutinize patterns of multi-drug-resistant uropathogenic Escherichia coli(UPEC) strains and particularly of fluoroquinolone-resistance this is an alternative choice for the treatment of urinary tract infections.Methods:Bacterial samples(n = 250) were collected from out-patients from August 2012 to August 2014 Islamabad.Antibiotic susceptibility profiling and determination of minimum inhibitory concentrations(MICs) and minimum bactericidal concentrations were performed according to the guidelines of Clinical and Laboratory Standards Institute(CLSI,2012).Genes,qnrA,qnrB and qnrS were identified by DNA amplification and sequencing.Results:The highest percentage of UPEC isolates were resistant to co-trimoxazole(82%) followed by cephalothin(80%),2nd Gen,3rd Gen and 4th Gen cephalosporins,respectively.Resistance against gentamicin,amikacin remained 29% and 4%.For other drugs including nitrofurantoin,tetracycline,carbapenem and beta-lactam inhibitors remained below 10%.Altogether,59% of the isolates were resistant to at least three antibiotics including one fluoroquinolone.Overall,MICs for ciprofloxacin remained(MIC≥256 μg/mL) and for levofloxacin(MIC≥16 μg/mL and 32 μg/mL).No significant differences were observed regarding MIC values of extended spectrumβ-lactamase(ESBL) and non-ESBL producers.For qnrS and qnrB positive isolates MICs remained above 32 μg/mL.Prevalence of UPEC was significantly higher among females and 40% of the isolates were ESBL producers.Conclusions:Higher percentages of ESBL producing UPEC were associated with urinary tract infections.Moreover,the majority of these isolates were multi-drug resistant and fluoroquinolone-resistant. 展开更多
关键词 Fluoroquinolone-resistant uropathogenic E.COLI Multi-drug RESISTANT Extended spectrum BETA-LACTAMASE
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Correlation of biofilm formation of uropathogenic Escherichia coli(UPEC) and fimbriae genotypes
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作者 Maysaa El Sayed Zaki 《Asian Pacific Journal of Tropical Medicine》 SCIE CAS 2009年第5期49-53,共5页
Objective:In the present study we try to correlate between pathogenic intrinsic factor of Escherichia coli(E.coli) presented with different fimbria genotyes and biofilm formation with host immune factor entitled inter... Objective:In the present study we try to correlate between pathogenic intrinsic factor of Escherichia coli(E.coli) presented with different fimbria genotyes and biofilm formation with host immune factor entitled interleukin-6(IL-6) secretion as defense mechanism.Methods:A total of 91 pediatrics complaining of pyuria were included in the present study.In addition,20 healthy control children were included.Full microbiological study was performed for isolated E.coli.PapC alleles were studied by multiple alleles PCR and biofilm formation was studied.IL-6 was measured in urine.Results:IL-6 had statistically significant elevation in patients’urine compared to control.From biofilm study, it was found that 19 isolated E.coli had formed biofilm in vitro.Moreover,urine samples with positive biofilm formation of E.coli had statistically significant lower IL-6 secretion than those with negative E.coli for biofilms.The distribution of fimbria genotypes showed that the frequent genotype was for alleleⅠ(34.3%) followed by mixed allelesⅠandⅡ(24.1%).There was significant correlation between mixed alleles(Ⅰ&Ⅱ)and biofilm formation.Conclusion: The present study highlights the presence of significant strains of E.coli causing urinary tract infections capable of biofilm formation.Biofilm formation is associated with less innate immunity manifested by lower urinary IL- 6.The majority of isolates had fimbria genes.It appears that mixed allelesⅠandⅡhave prominent virulence effect with tendency for biofilm formation. 展开更多
关键词 uropathogenic ESCHERICHIA coli INTERLEUKIN -6(IL-6) Urinary TRACT infection BIOFILM
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Genetic Diversity of Uropathogenic Escherichia coli Isolated from Human T Lymphotropic Virus Type I (HTLV-I) Infected Individuals
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作者 Andréia Santos Silva Elizabeth de Souza Neves +5 位作者 Maria Cristina Lourenç o Márcia dos Santos Guimarã es Debora Ribeiro de Souza Santos Adriana Hamond Regua-Mangia 《Advances in Infectious Diseases》 2016年第4期163-173,共12页
Urinary tract infection (UTI) is a frequent pathology among HTLV-I+ individuals being capable of severely compromising the kidneys and bladder. Molecular characteristics of uropathogenic Escherichia coli (UPEC) from H... Urinary tract infection (UTI) is a frequent pathology among HTLV-I+ individuals being capable of severely compromising the kidneys and bladder. Molecular characteristics of uropathogenic Escherichia coli (UPEC) from HTLV-I+ infected individuals are unknown. UPEC isolates from HTVL-I+ individuals, with and without clinical symptoms of myelopathy, were submitted to genetic typing seeking to infer bacterial diversity and potential virulence. 71 bacterial isolates were characterized according to random amplified polymorphic DNA and phylotypes. Phylotyping classified E. coli into four phylogenetic groups: A (18.3%), B1 (16.9%), B2 (39.4%), and D (25.3%) and 8 phylotypes according to the presence of the genetic sequences chuA, yjaA and the DNA fragment TSPE4.C2: ﹣﹣﹣ (5.6%) and ﹣+﹣ (12.6%) in phylogroup A, ﹣﹣+ (7.0%) and ﹣++ (9.8%) in B1, +++ (32.3%) and ++﹣ (7.0%) in B2, +﹣﹣ (15.4%) and +﹣+ (9.8%) in D. The B2 phylogroup was the most prevalent among HTLV﹣ associated myelopathy and asymptomatic individuals. RAPD-PCR typing revealed a high degree of bacterial polymorphism indicating a non-clonal origin. Genotypes were not found to be distributed according to clinical status or epidemiological features. Our results lead us to suggest that the neurological impairment in HTLV-I+ individuals can be a risk factor for urinary infections due E. coli which are caused by distinct bacterial lineages. 展开更多
关键词 uropathogenic Escherichia coli Genetic Diversity PHYLOTYPE HTLV-I+
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Adherence of uropathogenic Escherichia coli to human primary epithelial cells of renal pelvis
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作者 CHAO GU JIN YING CHEN +2 位作者 MIN HOU JING DONG HE JI WU CHANG 《Journal of Microbiology and Immunology》 2006年第4期252-257,共6页
Human primary epithelial cells of renal pelvis was established to investigate the adherence of uropathogenic Escherichia coli (UPEC) to this cell line, in which the primary cell culture was performed by using cultiv... Human primary epithelial cells of renal pelvis was established to investigate the adherence of uropathogenic Escherichia coli (UPEC) to this cell line, in which the primary cell culture was performed by using cultivation of the normal epithelium of renal pelvis in keratinocyte serum free medium (K-SFM) with epidermal growth factor (EGF) and bovine pituitary extract (BPE). Both UPEC132 obtained from urine specimen of patients with pyelonephritis and the pilus-free representative strain E. coli K-12p678- 54 were used to study the adherence of these strains on human primary epithelial cells of renal pelvis. The UPEC adherence was performed with observation on the morphological changes of the adhered cells, while the adhesion rates and indices were calculated in different times of experiment. In addition, the virulence genes hly and cnfl of UPEC132 were detected by multiplex PCR assay. In this study, the human primary epithelial cells of renal pelvis was found to exhibit the character of the transitional epithelial cells. Compared with the control group, the adhesion rates and indices began to increase from 15 min of the experiment time and reached its peak in 120 min. The adhesion rate and index of UPEC132 to human primary epithelial cells of renal pelvis were 74.4% and 34.0 respectively. Many microscopic changes in the primary cells adhered with UPEC132 could be detected, such as rounding or irregularity in shape, unevenness in staining and the cytoplasmic and nuclear changes. It suggests that human primary epithelial cells of renal pelvis can be used for the experiment on UPEC adhesion, thus providing a basis for the further study on the pathogenesis of UPEC. 展开更多
关键词 uropathogenic E . coli Human primary epithelial cells of renal pelvis Primary culture Adhesion Virulence gene
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Multi-drug Resistant Uropathogenic Escherichia coli and Its Treatment by Chinese Medicine 被引量:8
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作者 LIU Shi-wei XU Xiao-yang +4 位作者 XU Jie YUAN Jiu-yun WU Wei-kang ZHANG Ning CHEN Ze-liang 《Chinese Journal of Integrative Medicine》 SCIE CAS CSCD 2017年第10期763-769,共7页
Objectives: To investigate the resistance and virulence profiles of uropathogenic Escherichia coli(UPEC) and its treatment by Chinese medicine(CM) Fuzheng Qingre Lishi Formula(扶正清热利湿方, FQLF). Methods: U... Objectives: To investigate the resistance and virulence profiles of uropathogenic Escherichia coli(UPEC) and its treatment by Chinese medicine(CM) Fuzheng Qingre Lishi Formula(扶正清热利湿方, FQLF). Methods: UPEC strains were isolated from recurrent urinary tract infections(UTIs) patients. Patient sensitivities to 17 antibiotics were tested by the disk diffusion method. Virulence genes were screened by plolymerase chain reaction. A mouse model was constructed using a multi-drug resistant and virulent UPEC strain and treated with FQLF or the antibiotic imipenem. The treatment efficacy was evaluated by bacterial clearance from urine and the urinary organs. Results: A total of 90 UPEC strains were collected, and 94.4% of the isolates were resistant to at least 1 antibiotic. Approximately 66.7% of the UPEC strains were multi-drug resistant. More than one virulence gene was found in 85.6% of the isolates. The extended-spectrum β-lactamases(ESBL)-positive strains were more resistant than the negative ones. The virulence gene number was positively correlated with the resistance number(P〈0.05). A mouse model was successful y constructed using UPEC10. Treatment with either FQLF or antibiotics significantly cleared bacteria from the mouse urine after 14 days. In the untreated control, the bacteria lasted for 28 days. FQLF treatment of the UTI mouse model greatly reduced the bacterial number in the kidney and bladder, but could not completely clear the bacteria. Conclusions: Multi-drug resistance is common among UPEC isolates, and the resistance is positively related with virulence. FQLF could treat UPEC UTIs, but could not completely clear the bacteria from the host. 展开更多
关键词 urinary tract infection uropathogenic Escherichia coli Chinese medicine multi-drug resistance
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Epidemiologic Profile Urinary Tract Infections: Experience of the Microbiology Laboratory of the University Hospital Mohamed VI in Tangier
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作者 Nouhaila Chahid Chaimae Errabhi +3 位作者 El Ghali Tazi Sihame El jamii Yasmine Kemmach Karima Rissoul 《Advances in Infectious Diseases》 CAS 2024年第3期620-627,共8页
Urinary tract infection is one of the most common bacterial infections in humans. The urine cytobacteriological examination is the key test for its diagnosis. This work aims to Evaluate the prevalence of urinary tract... Urinary tract infection is one of the most common bacterial infections in humans. The urine cytobacteriological examination is the key test for its diagnosis. This work aims to Evaluate the prevalence of urinary tract infection at the Microbiology Laboratory of the University Hospital Mohamed VI in Tangier and to highlight its epidemiological and bacteriological characteristics. It was a descriptive study with retrospective data collection which took place from January 2021 to June 2022, at the Microbiology Laboratory of the university hospital Mohamed VI in Tangier. It covered all urine cytobacteriological examinations (ECBU) during the study period. We identified 77 cases of urinary tract infections out of 300 requests for (ECBU), that is a positivity rate of 25 %. The mean age was 55 years. The male gender was predominant. The epidemiological profile of the isolated strains was dominated by Enterobacteriaceae 81 %, followed by Gram-positive cocci 11 % and non-fermenting gram-negative bacteria 8 %. The main bacteria responsible for urinary tract infections in order of frequency: Escherichia coli 42 %, Klebsiella pneumoniae 20 %, Enterobacter cloacae 9 %, Staphylococcus aureus 6 %, Pseudomonas aeruginosa 5 % and Acinetobacter baumannii 3%. Most of the analyzed organisms showed resistance, especially to the beta-lactam antibiotic;the enterobacteria strains isolated had revealed resistance to amoxicillin: 74%, to amoxicillin-clavulanic acid in 40% of cases, and to third-generation cephalosporins in 24%. In terms of resistance mechanisms, 11 % of the Enterobacteriaceae were extended-spectrum β-lactamase producers and 9 % of the specimens were identified as carbapenemase producers. Of the Staphylococcus aureus strains isolated, 75% were resistant to meticillin. The Glycopeptides and linezolid were the most active molecules on these isolated strains. 15% of Enterococcus species isolated in our laboratory were resistant to glycopeptides (vancomycin and teicoplanin). 展开更多
关键词 EPIDEMIOLOGY Urinary Tract Infection Cytobacteriological Urinary Test UROPATHOGENS Multiresistant Bacteria Antibiotic Sensitivity Morocco
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Prevalence of ESBL phenotype,bla_(CTX-M-1),bla_(SHV)and bla_(TEM)genes among uropathogenic Escherichia coli isolates from 3 military hospitals of Tehran,Iran
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作者 Farshad Nojoomi Abdolmajid Ghasemian 《Journal of Coastal Life Medicine》 2016年第8期616-618,共3页
Objective:To determine the extended-spectrum beta-lactamase(ESBL)production and prevalence of bla_(CTX-M-1),bla_(SHV)and bla_(TEM)genes among uropathogenic Escherichia coli(UPEC)isolates from 3 military hospitals of T... Objective:To determine the extended-spectrum beta-lactamase(ESBL)production and prevalence of bla_(CTX-M-1),bla_(SHV)and bla_(TEM)genes among uropathogenic Escherichia coli(UPEC)isolates from 3 military hospitals of Tehran during 2015-2016.Methods:One-hundred and eleven isolates were adopted.The antibiotic susceptibility testing was conducted according to Clinical and Laboratory Standards Institute guidelines.The combine disk was used for phenotypic ESBL production.The ceftazidime MIC was conducted with the micro-broth dilution test.The PCR assay was used to detect the bla_(CTX-M-1),bla_(SHV)and bla_(TEM)genes.Results:In the broth microdilution method,103(92.7%)isolates showed minimal inhibitory concentration(MIC)≥1μg/mL,and also in the combined disk method,89(80.1%of all)were ESBL positive.On the other hand,among 91 ceftazidime resistant isolates,86(77.4%of all)were ESBL positive.The difference between the two methods for ESBL confirmation was not significant.The result of MIC was similar to the disk diffusion method in the detection of phenotypic ESBL production.Among ESBL producer isolates,the prevalence of bla_(CTX-M-1),bla_(SHV)and bla_(TEM)was 77.4%(n=86),47.4%(n=53)and 2.4%(n=2),respectively.These genes were amplified in a wide range MIC of ceftazidime.Conclusions:The prevalence of multi-drug resistant UPEC and ESBL positive isolates was high in military hospitals.The majority of UPEC isolates amplified bla_(CTX-M-I)and bla_(SHV)typeβ-lactamase genes.One-third of isolates were positive in presence of both these genes.There was no relation between ceftazidime MIC and presence of beta-lactamase genes. 展开更多
关键词 uropathogenic Escherichia coli ESBL Military hospitals Hospitalized patients Combine disk
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Prevalence and antimicrobial resistance pattern of bacterial strains isolated from patients with urinary tract infection in Messalata Central Hospital, Libya 被引量:3
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作者 Mahmoud A.Mohammed Tarig MS Alnour +1 位作者 Osama M.Shakurfo Mariam M.Aburass 《Asian Pacific Journal of Tropical Medicine》 SCIE CAS 2016年第8期749-754,共6页
Objective: To investigate the prevalence of urinary tract infection among patients at Messalata Central Hospital, Libya, to identify the causative bacteria, and to explore their resistance pattern to antimicrobials. M... Objective: To investigate the prevalence of urinary tract infection among patients at Messalata Central Hospital, Libya, to identify the causative bacteria, and to explore their resistance pattern to antimicrobials. Methods: A total number of 1 153 urine samples were collected from patients, who attended daily to Messalata Central Hospital, Libya, in a study extended for one year. Antimicrobial susceptibility testing and isolates typing were done using Phoenix BD(BD diagnostic). Resistance was confirmed manually using agar disk diffusion method. Results: Of the 1 153 urine samples tested, 160(13.9%) samples were positive, from which 17 different, solely Gram negative, uropathogens were identified. Escherichia coli were the most prevalent(55.6%) bacteria, followed by Klebsiella pneumoniae subspecies pneumoniae(16.3%), Proteus mirabilis(6.3%), Pseudomonas aeruginosa(5.6%), Enterobacter cloacae and Klebsiella oxytoca(2.5%, each), Citrobacter koseri and Providencia rettgeri(1.9%, each), Acinetobacter baumannii, Enterobacter aerogenes and Proteus vulgaris(1.3%, each), and Aeromonas caviae, Citrobacter freundii, Cronobacter sakazakii, Enterobacter amnigenus biogroup 2, Pseudomonas putida and Serratia marcescens(0.6%, each). The isolated uropathogens showed increased levels of resistance ranged from 10.5% to 64.5%, with an overall resistance of 28.9%. Amikacin was the most effective antimicrobial followed by Imipenem and Meropenem(0%, 0.6% and 2.5% resistance, respectively); while, Cephalothin and Ampicillin were the least(80.6% and 90.0% resistance, respectively) effective. Conclusions: The obtained results emphasized the emergence of highly resistant bacteria to most of tested antimicrobials and raise the alarm for physicians to change their treatment pattern depending on antimicrobial susceptibility results. 展开更多
关键词 URINARY TRACT infection(UTI) UROPATHOGENS Significant Bacteruria ANTIMICROBIAL susceptibility testing(AST) ANTIMICROBIAL resistance ENTEROBACTERIACEAE
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Prevalence and antibiogram of bacterial isolates from urinary tract infections at Dessie Health Research Laboratory,Ethiopia 被引量:1
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作者 Mulugeta Kibret Bayeh Abera 《Asian Pacific Journal of Tropical Biomedicine》 SCIE CAS 2014年第2期164-168,共5页
Objective:To determine the prevalence and antimicrobial susceptibility of bacteria from suspected urinary tract infections.Methods:A retrospective analysis of Imcterial pathogens and their antimicrobial susceptibility... Objective:To determine the prevalence and antimicrobial susceptibility of bacteria from suspected urinary tract infections.Methods:A retrospective analysis of Imcterial pathogens and their antimicrobial susceptibility was done on urine samples at Dessic Regional Laboratory in the period 2003 to 2010.Antimicrobial susceptibility tests were done using disc diffusion technique as per the standard of Kirby-Bauer method.Results:The male to female ratio of the patients was 1:1.96.Of the total 1404 samples..119(22.7%,were culture positive.Escherirhia coli was the dominant isolate(63.6%) followed by Klebsiella spp.(8.5%) and Proteus spp.(8.2%).The overall resistance rates to erythromycin,amoxycillin,and tetracycline were 85.6%,88.9%and 76.7%,respectively,The three most frequently isolated bacteria had resistance rates of 80.1%-90.0%to.amoxycillin,and tetracycline and sensitivity rates of 0to 25%to nitrofurantoin,ciprofloxacin and genlamiein.Antibiogram of isolates showed that 152i47.85%isolates were resistance to two and more antimicrobials.Conclusions:In the study area resistance rates to erythromycin,amoxycillin and tetracycline were high.Since most isolates were sensitive to nitrofurantoin and gentamicin.they are considered as appropriate antimicrobials for empirical treatment urinary tract infections. 展开更多
关键词 ANTIMICROBIAL resistance BACTERIA Ethiopia UROPATHOGENS
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The Bacterial Isolates and Plasmid Profile of Extended Spectrum Beta-Lactamases Producers Causing Urinary Tract Infection among Pregnant Women in Uyo, Nigeria 被引量:1
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作者 Ifeanyi Abraham Onwuezobe Florence Effiong Orok 《Journal of Biosciences and Medicines》 2015年第7期25-30,共6页
Background: Extended spectrum beta-lactamases (ESBLs) are enzymes that compromise the efficacy of all beta-lactams and are spread by plasmids. They are of public health importance the world over;however, in Nigeria in... Background: Extended spectrum beta-lactamases (ESBLs) are enzymes that compromise the efficacy of all beta-lactams and are spread by plasmids. They are of public health importance the world over;however, in Nigeria in general and Uyo in particular, tests for their detection are not routinely done in hospital laboratories despite increase in treatment failures observed for common clinical conditions like urinary tract infection. Objective: To isolate ESBLs producing uropathogens and the plasmid underlying their resistance to antibiotics. Materials and Methods: Three hundred urine specimens (n = 300) were collected from pregnant women attending antenatal clinics at St. Lukes Hospital, Anua, cultured and incubated according to accepted standard. Identification of isolates was done using Microbact 24E (Oxoid, UK) system. The predominant bacterial pathogens were Escherichia coli (42%) followed by Klebsiella pneumonia (21%), Klebsiella oxytoca (12%), Citrobacter spp. (5%), Proteus mirabilis (7%), Enterobacter spp. (12%) and Acinetobacter baumanii (1%). The isolated bacteria were tested for their antibiotic susceptibility using Clinical Laboratory Standard Institute (CLSI) recommended disc diffusion method. A Double Disk Synergy Test (DDST) and Phenotypic Disk Confirmatory Test (PDCT) were performed to determine ESBL production. Chromagar ESBL was also used to test for the presence of ESBL producing isolates. The plasmid content of ESBL producing isolates and their participation in drug resistance were investigated. Results: Of the 80 bacterial isolates causing urinary tract infection in these women, the ESBL producers were found to be 16 (20%). Out of these 16 ESBL producing urogenital isolates Klebsiella pneumonia (8, 50%) was the most prevalent. Others include Escherichia coli (38%), Klebsiella oxytoca (6%) and Enterobacter cloacae (6). Plasmid content of ESBL producing isolates was found to be 87.5%. Conclusion: The Extended Spectrum Beta-lactamase producing uropathogens mainly of plasmid origin are increasingly responsible for the cause of community acquired urinary tract infections in pregnant women in Uyo. 展开更多
关键词 ESBL PLASMID Content UROPATHOGENS
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Bacterial Uropathogen among Benign Prostatic Hyperplasia Patients at a Tertiary Hospital in Nigeria
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作者 Adebola J. Oshodi Charles Nwabuisi +5 位作者 Ademola A. Popoola Luke D. Edungbola Olajide O. Agbede Ajibola A. Akanbi II Abayomi Fadeyi Rasaki A. Raheem 《Open Journal of Medical Microbiology》 2015年第1期22-27,共6页
As the lumen of the prostatic urethra becomes compromised by fibroadenomatous growth in the periurethral region of the prostate of men with Benign prostatic hyperplasia (BPH), urine outflow is obstructed progressively... As the lumen of the prostatic urethra becomes compromised by fibroadenomatous growth in the periurethral region of the prostate of men with Benign prostatic hyperplasia (BPH), urine outflow is obstructed progressively resulting in incomplete bladder empting causing stasis and may predispose patients to infection. Mid stream urine samples were collected from 94 BPH patients. Macroscopy, microscopy, culture and antibiotic susceptibility test were carried out on isolated uropathogens. Isolated bacteria were characterized using biochemical tests. Isolated bacterial pathogens include Proteus mirabilis, Escherichia coli, Pseudomonas aeruginosa, Klebsiella oxytoca, Morgarella morgani, K. pneumonia and Enterococcus faecalis in order of frequency. The isolates show highest resistance of 87.1% to Ciprofloxacin and least resistance of 12.9% to Imipenem. The isolates were found to be multi-drug resistant and the 12.9% resistance to Imipenem suggests presence of Carbapenemase producing bacteria among the isolates. 展开更多
关键词 Uropathogen BENIGN PROSTATIC HYPERPLASIA URINARY TRACT Infection
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Incidence of Urinary Tract Infections and Its Aetiological Agents among Pregnant Women in Karnataka Region
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作者 Manjula N. G. Girish C. . Math +2 位作者 A. Patil Subhashchandra M. Gaddad Channappa T. Shivannavar 《Advances in Microbiology》 2013年第6期473-478,共6页
Urinary tract infection (UTI) is the most common medical complications of pregnancy together with anaemia and hypertension and it occurs approximately in 5%-10% of all pregnancies. The aim of this study was to determi... Urinary tract infection (UTI) is the most common medical complications of pregnancy together with anaemia and hypertension and it occurs approximately in 5%-10% of all pregnancies. The aim of this study was to determine the incidence of UTI and prevalence of uropathogens among pregnant women. During the study period from December 2009 to August 2010, 417 urine samples were analyzed. UTI was diagnosed by growth of at least 105 CFU/ml of a urinary tract pathogen in a culture of a midstream urine sample. The isolated bacteria were identified by biochemical tests. The results showed that 49.4% of pregnant women have UTI. E. coli which was the most frequently isolated organism (56.79%), followed by Klebsiella sps (19.9%), Pseudomonas sps (6.3%), and Proteus sps (5.8%). Other pathogens isolated were Enterobacter (3.8%), Citrobacter (1.4%) and Enterococcus sps (0.9%). Of the variables examined, the highest prevalence rate was observed where, 53.3% of the infected women were in the age group 36 to 40 years, 54.15% were in their 3rd trimester;also the highest infection rate (70.2%) was observed in 7th month of pregnancy, concluding that old age pregnancy increased parity prone for UTI apart from individual hygiene and economical status. 展开更多
关键词 UTI Pregnancy UROPATHOGENS E COLI ASB
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Microbial Profile and Antibiotic Resistance Pattern of Urine and Biofilm Pathogens Isolated from Catheterized Patients at Komfo Anokye Teaching Hospital, Kumasi, Ghana
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作者 Alexander Bekoe Roland Azorliade +1 位作者 Anthony Ablordey Matthew Glover Addo 《Journal of Biosciences and Medicines》 2021年第10期1-13,共13页
<strong>Introduction: </strong>Urinary tract infection represents more than 40% of all nosocomial infections of which 80% are attributed to the use of an indwelling urinary catheter. Although the device is... <strong>Introduction: </strong>Urinary tract infection represents more than 40% of all nosocomial infections of which 80% are attributed to the use of an indwelling urinary catheter. Although the device is useful medically to treat urinary retention and incontinence, its uses have also been associated with infections such as catheter-associated urinary tract infections. <strong>Objectives:</strong> To evaluate catheter-associated urinary tract infection in terms of its prevalence, pathogens causing the infection and the resistance pattern to some commonly used antibiotics. <strong>Methods: </strong>Urine and biofilm specimen were collected from 105 catheterized patients. Bacteria pathogens were identified based on colony morphology, Gram staining and other biochemical reactions. Kirby-Bauer disc diffusion method was employed to determine the antibiotic resistance pattern of the isolated pathogens. <strong>Results: </strong>The study recorded a 74.29% prevalence of catheter-associated urinary tract infection among the rarely symptomatic patients. <em>Escherichia coli</em> were significantly isolated (p < 0.000) in both samples compared to Klebsiella pneumoniae and <em>Staphylococcus aureus</em>. Most isolated pathogens from both samples were resistant to ciprofloxacin with the biofilm pathogens being highly resistant than the urine pathogens. K. pneumoniae from both samples showed higher resistance levels to antibiotics than <em>E. coli</em> and <em>S. aureus</em>. <strong>Conclusion:</strong> Ciprofloxacin, a commonly used antibiotic by catheterized patients turn out to be less effective against the pathogens. The use of ciprofloxacin in catheter-associated urinary tract infection treatment should therefore be given a second thought. 展开更多
关键词 ASYMPTOMATIC BIOFILM CATHETERIZATION Retention Uropathogen
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Clino-Pathological Features of Urinary Tract Infection in Rural India
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作者 Rutuja Raval R. J. Verma Hiten Kareliya 《Advances in Infectious Diseases》 2015年第4期132-139,共8页
The study was aimed to understand the clino-pathological characteristics of urinary tract infection along with the techniques used in diagnosis and treatment of the presenting infection. The study takes into considera... The study was aimed to understand the clino-pathological characteristics of urinary tract infection along with the techniques used in diagnosis and treatment of the presenting infection. The study takes into consideration the various risk factors such as age, sex, and diabetes mellitus which can precipitate a urinary tract infection. The study was conducted at the Global Baroda Hospital, Vadodara and Narhari Hospital, Vadodara in the duration from January to March 2012, under the supervision of Dr. Hiten Kareliya. A questionnaire was prepared in accordance to evaluate risk factors of urinary tract infection. The patients under study were chosen according to specific inclusion criteria. The uropathogens were isolated with the help of biochemical testing. E. coli (38%) was found to be the most prevalent organism followed by Klebsiella and Candida albicans (both 10%), Pseudomonas aeruginosa (9%), Staphylococcus (7%). 展开更多
关键词 Urinary Tract Infections BACTEREMIA UROPATHOGENS E. coli Antibiotic Sensitivity AMINOGLYCOSIDE Carbapenem CATHETERIZATION Diabetes CALCULI UROSEPSIS
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Incidence and Etiology of Catheter Associated Urinary Tract Infection among Admitted Patients at Kabale Regional Referral Hospital, South Western Uganda
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作者 Benson Musinguzi Immaculate Kabajulizi +2 位作者 Moses Mpeirwe Joseph Turugurwa Taseera Kabanda 《Advances in Infectious Diseases》 2019年第3期183-196,共14页
Introduction: Catheter Associated Urinary Tract Infection is the most common hospital acquired infection worldwide. Urinary Tract Infections among catheterised patients are on rise regardless of antibiotic use and thi... Introduction: Catheter Associated Urinary Tract Infection is the most common hospital acquired infection worldwide. Urinary Tract Infections among catheterised patients are on rise regardless of antibiotic use and this is due to erratic use of antibiotics, treatment failure, antimicrobial resistance and emergency of Extended Spectrum Beta Lactamase producing bacteria leading to patient distress, increased healthcare costs, long hospital stay and poor patient response to antibiotics. In Uganda, no previous studies have sought to study the burden of CAUTI among catheterized patients, the bacterial pathogens involved and their antimicrobial susceptibility patterns yet there is upsurge in antimicrobial resistance of uropathogens. The effective management of patients suffering from Catheter Associated Urinary Tract infection (CAUTI) relays on the identification of uropathogens that cause CAUTI and the selection of an effective antibiotic agent to the uropathen in question. Objectives: The objectives of this study were to determine incidence, etiology and antibiotic susceptibility pattern among the uropathogens causing Catheter Associated Urinary Tract Infections among patients with indwelling catheters at Kabale Regional Referral Hospital. Methods: Using a descriptive prospective observational hospital-based study, the study was conducted on 150 catheterized patients recruited from Emergency, Obstetrics and gynecology, Medical, Maternity and Surgical wards at Kabale Regional Referral Hospital between April and May 2019. The urine samples from study participants were processed in Kabale RRH microbiology laboratory as per standard operating procedures. After isolation and identification, all the isolates were subjected to antibiotic susceptibility testing for commonly used antibiotics. Results: Following the urine culture from 150 catheterized patients, urine from 23 (15.3%) patients showed significant growth. The common bacterial isolates were Escherichia coli 12 (52%), followed by the Klebsiella pneumoniae 6 (26%), Staphylococcus aureus 3 (13%) and Pseudomonas spp. 2 (8.7%). All Gram-negative isolates were sensitive to Imipenem 20 (100%) while all S. aureus isolates (3) were 100% sensitive to Vancomycin and Cefoxitin. Isolates were sensitive to Gentamicin 20 (82.6), Ceftriaxone 16 (69.6), Ciprofloxacin 10 (43.5) and Nitrofurantoin 9 (39.1). All isolates were 100% resistant to Cotrimoxazole. 6 gram negative isolates were resistant to ceftazidime and were tested for Extended Spectrum Beta (&#223;) Lactamase (ESBL), 5 (83.3%) were identified as ESBL-producing bacteria. K. pneumonia 3 (60%) presented the highest percentage of ESBLs as compared to E. coli 2 (40%). Conclusions: The Incidence of CAUTI among patients with indwelling urinary catheters at Kabale Regional Referral Hospital is high (15.3%) and is mostly caused by E. coli and K. pneumoniae. These bacteria are resistant to most commonly used antibiotics and thus there is a need to put more emphasis on CAUTI prevention strategies and use culture and sensitivity tests before prescription of antibiotics. 展开更多
关键词 CATHETER ASSOCIATED URINARY TRACT Infection(CAUTI) ESBL Uropathogens URINARY TRACT INFECTION INCIDENCE
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