Wild barley （Hordeum vulgare spp. spontaneum） is the undisputed progenitor of cultivated barley and offers considerable poten- tial as a genetic resource for barley improvement. Naturally occurring populations are d...Wild barley （Hordeum vulgare spp. spontaneum） is the undisputed progenitor of cultivated barley and offers considerable poten- tial as a genetic resource for barley improvement. Naturally occurring populations are distributed primarily across the Fertile Crescent, but secondary areas of diversity are also found in central Asia and Tibet. The pattern of its genetic diversity is non-random, and is structured on a global, regional and local scale. On a global scale, diversity follows ecogeography, while on a regional and local scale, it is more strongly determined by ecology. Populations growing in areas where the climate is unreliable and/or the soil is heterogeneous tend to retain the most diversity. A large number of accessions are currently conserved ex situ, but a high proportion of these have originated fi：om the Fertile Crescent. Given the likelihood of future climate change, conserving germplasm both in situ and ex situ in the various regions where the species＇ currently existing is a research priority. The value of H. vulgare spp. spontaneum for the improvement of cultivated barley lies largely in its potential contribution to the levels of attaina- ble pathogen resistance and abiotic stress tolerance.展开更多
The hina gene encodes a HINA protein in seeds of barley （Hordeum vulgare）, which was known to affect the grain hardness. 171 hina gene sequences from Tibetan wild barley accessions and worldwide were characterized. ...The hina gene encodes a HINA protein in seeds of barley （Hordeum vulgare）, which was known to affect the grain hardness. 171 hina gene sequences from Tibetan wild barley accessions and worldwide were characterized. Across 1 452 nucleotides of 171 hina genes, 152 SNPs were detected, giving an average frequency of one SNP per 9.5 bases. There were 93 singleton variable sites （the nucleotide polymorphism only observed in a single accession）, 59 polymorphic sites （the polymorphisms found in two or more accessions） and 8 indels. A total of 18 haplotypes were defined, and most of the barley accessions shared one gene haplotype. H. spontaneum had a wider haplotype distribution. Through the analysis of median-joining network of the 18 haplotypes, 4 haplotype groups were found, which were testified by neighbor-joining tree based on the complete sequence alignment. Extremely low level of hina gene diversity was observed in Tibetan wild barley accessions, indicating that Tibet is unlikely a center of origin for cultivated barley.展开更多
基金supported by "One Hundred Talents" Project of The Chinese Academy of Sciences (Grant No.O827751002)The National Natural Science Foundation of China (Grant Nos. 30970449, 31170369, 31160036)the Ancell-Teicher Research Foundation of Genetic and Molecular Evolution for financial support
文摘Wild barley （Hordeum vulgare spp. spontaneum） is the undisputed progenitor of cultivated barley and offers considerable poten- tial as a genetic resource for barley improvement. Naturally occurring populations are distributed primarily across the Fertile Crescent, but secondary areas of diversity are also found in central Asia and Tibet. The pattern of its genetic diversity is non-random, and is structured on a global, regional and local scale. On a global scale, diversity follows ecogeography, while on a regional and local scale, it is more strongly determined by ecology. Populations growing in areas where the climate is unreliable and/or the soil is heterogeneous tend to retain the most diversity. A large number of accessions are currently conserved ex situ, but a high proportion of these have originated fi：om the Fertile Crescent. Given the likelihood of future climate change, conserving germplasm both in situ and ex situ in the various regions where the species＇ currently existing is a research priority. The value of H. vulgare spp. spontaneum for the improvement of cultivated barley lies largely in its potential contribution to the levels of attaina- ble pathogen resistance and abiotic stress tolerance.
文摘The hina gene encodes a HINA protein in seeds of barley （Hordeum vulgare）, which was known to affect the grain hardness. 171 hina gene sequences from Tibetan wild barley accessions and worldwide were characterized. Across 1 452 nucleotides of 171 hina genes, 152 SNPs were detected, giving an average frequency of one SNP per 9.5 bases. There were 93 singleton variable sites （the nucleotide polymorphism only observed in a single accession）, 59 polymorphic sites （the polymorphisms found in two or more accessions） and 8 indels. A total of 18 haplotypes were defined, and most of the barley accessions shared one gene haplotype. H. spontaneum had a wider haplotype distribution. Through the analysis of median-joining network of the 18 haplotypes, 4 haplotype groups were found, which were testified by neighbor-joining tree based on the complete sequence alignment. Extremely low level of hina gene diversity was observed in Tibetan wild barley accessions, indicating that Tibet is unlikely a center of origin for cultivated barley.
