Study on Marine actinomycetes and analysis of their secondary metabolites

Actinomycetes are relatively prevalent bacteria in the ocean,constituting 9% of the total number of marine bacteria.The advancement of science and technology has led to a more profound exploration of marine actinomycetes.These studies hold immense significance in comprehending the distribution and adaptation of marine actinomycetes within the oceanic environment,as well as uncovering new secondary metabolites.Based on differing lifestyles,marine actinomycetes can be categorized as free-living or co-epiphytic.The activity and metabolism of actinomycetes vary across diverse marine settings,including the deep sea,benthic regions,and marine organisms.Due to their distinctive biological traits and genetic background,these marine actinomycetes inevitably generate metabolites possessing unique structures.Research methodologies concerning marine actinomycetes predominantly encompass traditional pure culture techniques,molecular biology approaches,and the integration of metagenomics and bioinformatics.The exploration of varied methodologies proves pivotal for the analysis of metabolite processes.Through the cultivation of marine actinomycetes,numerous compounds featuring novel structures and significant activities have been isolated,furnishing a substantial foundation for new drug investigations.These encompass,but are not restricted to,peptides,antibiotics,terpenoids,ketones,quinones,macrolides,and pigments.The potential applications of marine actinomyces and their secondary metabolites extend beyond antibacterial and anti-tumor effects,exhibiting promising prospects in antifungal and antiviral domains.This paper provides a comprehensive review of the classification,resources,research methodologies,and habitats of marine actinomycetes.Furthermore,it delves into the classification of secondary metabolites and their functional activities,facilitating a more exhaustive analysis of the secondary metabolites produced by marine actinomycetes.

Tracing the sources of nutrients through the Tsushima/Korea Strait

The nutrients from the East China Sea(ECS) through the Tsushima/Korea Strait(TS) strongly impact the eco system of the Japan Sea(JS).The complex origins of the Tsushima Warm Current and the various nutrient sources in the ECS result in complex spatial-temporal variations in nutrients in the TS.Using a physical-biological model with a tracking technique,we studied the effects of nutrient sources from the ECS on the TS.Among all the nutrient sources,the Kuroshio has the highest nutrient concentrations in the TS.Its maximum concentration occurs at the bottom,while those of rivers and atmospheric depo sition occur at the surface,and that of the Taiwan Strait occurs in the middle layer.The nutrient transport through the TS exhibits similar seasonal variations,as does the volume transport.The transport of nutrients from the Kuroshio accounts for more than 85% of the total.The transport of nutrients from the Taiwan Strait is greater during autumn and winter.The transport of dissolved inorganic nitrogen(DIN) from both rivers and atmospheric deposition through the TS peak in August.Nutrient transport cannot be equated with volume transport.The DIN in the less saline zone originates not only from rivers but also from atmospheric deposition and the Kuroshio.The transport of nutrients from the Taiwan Strait is not as significant as its volume transport in the TS.

Structure, function, action mechanism and application prospect of black garlic peptide

Black garlic is a processed product derived from fresh garlic,retaining the original nutritional components of garlic while enhancing many of its biological activities.Black garlic peptides are a class of bioactive peptides extracted from fermented black garlic,which have gained considerable attention due to their unique health benefits.This article comprehensively discusses the extraction technologies,structural composition,biological functions,and application potential of black garlic peptides in agriculture,medicine,and the food industry.Extraction methods for black garlic peptides include ammonium sulfate precipitation,alkali-soluble acid-precipitation,enhanced hybrid supercritical fluid-assisted atomization(SAA-HCM),and others,which can efficiently separate bioactive peptides from black garlic.Structural and compositional analysis reveals the characteristics of black garlic peptides as small molecule peptides and the mechanisms of action of these peptides within the body.Black garlic peptides demonstrate health benefits such as antioxidation,anti-inflammatory effects,lipid-lowering properties,and immunomodulatory effects,providing scientific support for their applications in the medical field.In terms of application potential,black garlic peptides can be used as natural plant growth regulators and disease control agents in agriculture;in the medical field,their health benefits make them an important resource for developing new health supplements and drugs;in the food industry,black garlic peptides can serve as functional food additives to enhance the nutritional value and health benefits of foods.As a multifunctional bioactive substance,the optimization of extraction methods,in-depth studies of structure and function,and the development of applications in various fields will bring new opportunities for human health and industrial development.Future research should further explore the detailed mechanisms of action of black garlic peptides and their specific effects in different application domains to promote their wider use.

Progress in the extraction and application of collagen peptides

Collagen peptide is the product of complete hydrolysis of collagen,which has a relatively small molecular weight and is more easily absorbed than proteins and amino acids.Collagen peptide not only has unique nutritional value,but also has certain physiological functions,which makes it has great potential value in various fields,so it has set off a wave of research on collagen peptide in the biological world.This paper describes the sources and extraction methods of collagen peptides,and describes the research progress and application of collagen peptides in the medical,food,material and skin care industries according to their physiological functions,which will provide new ideas for the future research of collagen peptides.

Production, function, modification and application of zein

Gliadins are stored in plant seeds,such as gliadins in wheat and corn.Zein has good film forming,oil retention,water retention,stability,thermal plasticity,oxidation resistance and biodegradability,and zein can be dissolved in ethanol solution.These functional properties make zein have a wide application prospect in food,medicine,textile,environmental protection and other fields.This paper briefly introduces the source,structure and amino acid composition of zein,focuses on the extraction technology of zein,summarizes the functional properties of zein,and analyzes the modification methods of zein.In the long run,summarizing the functional characteristics of zein has a certain reference value for its application in the future and large-scale production.

Characterization of the Growth,Chlorophyll Content and Lipid Accumulation in a Marine Microalgae Dunaliella tertiolecta under Different Nitrogen to Phosphorus Ratios

Microalgal lipids are regarded as main future feedstock of biofuels for its higher efficiency of accumulation and sus- tainable production. In order to investigate the effect of various nitrogen to phosphorus ratios on cells growth, chlorophyll content and accumulation of lipids in Dunaliella tertiolecta, experiments were carried out in modified microalgal medium with inorganic nitrogen （nitrate-nitrogen） or organic nitrogen （urea-nitrogen） as the sole nitrogen source at initial N：P ratios ranging from 1：1 to 32：1. The favorable N：P of 16：1 in the nitrate-N or urea-N medium yielded the maximum cell density and specific growth rate. Decrease in chlorophyll content were observed at the N：P of 4：1 in both nitrate-N and urea-N cultures. It was also observed that the maximum lipids concentration was obtained at the N：P of 4：1 in both nitrate and urea nutrient medium. The lipid productivity and lipid content of cultures in the urea-N medium at the N：P of 4： lwere markedly higher than those from cultures with other N：P ratios （p〈 0.05）. The results of this work illustrate the possibility that higher ratios of nitrogen to phosphorus have enhancing effect on cells growth of D. tertiolecta. Conversely, higher lipid accumulation is associated with a decrease in chlorophyll content under lower ratios of nitro- gen to phosphorus. The results confirm the hypothesis of this study that a larger metabolic flux has been channeled to lipid accumu- lation in D. tertiolecta cells when the ratios of nitrogen to phosphorus drop below a critical level.

In Vitro Evaluation of the Antimethanogenic Potency and Effects on Fermentation of Individual and Combinations of Marine Macroalgae

Contribution of ruminants to total greenhouse gas emissions in Australia is approximately 10% and likely to increase with demand for livestock products, thus an efficient method of mitigation must be implemented. The red marine macroalgae Asparagopsis taxiformis reduces enteric methane production by up to 99% in vitro. Other macroalgae with less potent antimethanogenic properties may complement inclusion of Asparagopsis in livestock feeds. Adoption of environmental based changes in livestock systems must provide benefits to producers if change in management is to be adopted. This study used 72 h in vitro fermentations with rumen inoculum to characterize and rank seven species of macroalgae at low inclusion that previously demonstrated some degree of antimethanogenesis at higher inclusion concentration. The seven were assessed at 5% inclusion (OM basis) and in combination with Asparagopsis to evaluate beneficial effects on fermentation. When tested individually, improvements in volatile fatty acids were generally observed, however, minimal effect on gas production and no clear justification for a ranking order were demonstrated. When tested in combination with Asparagopsis, the effects on fermentation were dominated by presence of Asparagopsis at 2% and no further benefits demonstrated. Therefore, Asparagopsis remains the only macroalga inducing near elimination of methane in vitro and benefit of combinations with other macroalgae evaluated in this study was not demonstrated. However, combination with high protein macroalgae is proposed to provide productivity enhancement during seasonal lows in grass quality and thus reduce methane emissions intensity providing a stronger conduit for environmental responsibility while increasing productivity.

Molecular basis of cross-interactions between Aβ and Tau protofibrils probed by molecular simulations

Amyloid β-protein(Aβ) and Tau, two common pathogenic proteins associated with Alzheimer’s disease(AD), cross-interact, and thus co-assemble into hybrid aggregates. However, molecular mechanism of the cross-interactions remains unclear. To explore the issue, docking and molecular dynamics(MD) simulations were coupled to study the cross-interactions between Aβ pentamer and Tau pentamer. Four stable hybrid decamer conformations including double layer, single layer, block, and part-in were obtained by protein-protein docking software HADDOCK 2.2. Then, MD simulations were used to explore the molecular mechanism of cross-interactions between Aβ pentamer and Tau pentamer. The results of MD simulations showed that the part-in structure was the most stable among all the above four representative ones. The binding energy between Aβ and Tau was about-759.77 kJ·mol-1in the part-in structure. Moreover, the part-in conformation would undergo conformational transition, which would improve its hydrophobicity and make the structure more compact. This work offers a structural understanding of cross-interactions between Aβ and Tau linked to AD.

Transcriptomes of Litopenaeus vannamei reveal modulation of antioxidant system induced by dietary archaeal carotenoids

Oxidative stress induced by factors such as ammonia nitrogen has become a major issue in shrimp farming.The effects of carotenoids on the growth and antioxidant capability of Litopenaeus vannamei juveniles were investigated in this study using dietary archaeal carotenoids supplementation.For four weeks,shrimp were given diets containing 0 mg/kg(Ctrl)and 55.98 mg/kg(Car)archaeal carotenoids.Dietary archaeal carotenoids significantly enhanced the astaxanthin content in shrimp muscles and carapaces,as well as the superoxide dismutase(SOD)and glutathione peroxidase(GSH-Px)activity(P<0.05).The malonaldehyde(MDA)content in Car group significantly decreased(P<0.05).The transcriptome analysis was conducted to determine the molecular processes in response to archaeal carotenoids supplementation.A total of 1536 differentially expressed genes(DEGs)were detected,including 538 upregulated DEGs and 998 downregulated DEGs.GO functional enrichment analysis between Ctrl and Car indicated that 26 GO terms including extracellular region,metabolic process,and proteolysis were enriched.The KEGG pathway enrichment analysis revealed that the amino sugar and nucleotide sugar metabolism,cysteine and methionine metabolism,glycine serine and threonine metabolism,and amino acid biosynthesis were enriched.Archaeal carotenoids influenced the expression of several important genes involved in reactive oxygen species(ROS)generation,Nrf2 signaling,and antioxidant enzymes.Seven DEGs were chosen to confirm the RNA-Seq data using qRT-PCR.The genes and pathways discovered in this work assist to elucidate the molecular processes through which archaeal carotenoid enhances L.vannamei antioxidative system.

The science of saline lakes:the need for a multidisciplinary approach

Saline lakes are widespread on all continents.Since 1979,an informal international association of salt lake researchers from a variety of disciplines has sponsored a series of triennial conferences to foster scientific exchange and our understanding of saline lakes.International Society for Salt Lake Research(ISSLR,www.isslr.org)was founded in 1994 to establish effective liaison between persons interested in any aspect of inland saline waters,to encourage these interests,and to educate the public in the scientific use,management,and conservation of salt lakes.ISSLR conferences are held triennially.The conferences are usually hosted by a local University or research institution and provide an excellent opportunity for networking among globally dispe rsed researchers.

The nutritional value of Spirulina and utilization research

With the development of modern society,the demand for nutrition,health,and food safety among people is also increasing.More and more consumers are connecting their diet to a healthy lifestyle in order to reduce the occurrence of chronic diseases.Spirulina,known as green ginseng,is one of the most productive microalgae with high output value.It is considered as one of the most ideal dietary supplements due to its unique nutritional and health benefits.The main components of spirulina include protein,fat,vitamins,chlorophyll,and minerals.The protein content is particularly high,ranging from 60-70%.Spirulina can be used as a natural nutritional supplement,providing various essential nutrients needed by the body.Apart from being a nutritional supplement,spirulina is also widely utilized in the food,medicine,and cosmetics industries.Spirulina powder can be added to various foods such as bread,cakes,and biscuits to enhance their nutritional value.Spirulina extract can also be used in the production of healthcare and beauty products.Furthermore,the antioxidant and immune-boosting effects of spirulina make it a promising natural medicine for research in the treatment of cancer and liver disease.This paper aims to provide comprehensive information on the nutritional composition,secondary metabolites,and biological activities of spirulina,thereby contributing to the spirulina industry.

Research progress on the source,function and application of AMPs

Antibacterial peptide,also known as a host defense peptide,is a small molecular peptide that exhibits antibacterial activity.It disrupts the cell membrane structure of bacteria,leading to the release of internal contents and subsequent cell death,all without promoting the development of drug resistance in bacteria.It serves as a crucial component of the body’s innate immunity,forming the initial defense against the invasion of pathogenic microorganisms.However,the functionality of this small molecule peptide extends beyond this role.It also demonstrates positive effects in promoting organism growth,maintaining the balance of beneficial bacteria within organisms,combating cancer,enhancing immune function,and combating viruses,among other benefits.Additionally,it finds applications in biomaterials,food preservation,animal husbandry,and aquaculture.In summary,this small molecular peptide plays a significant role in various domains.

Major allergens in 8 types of allergenic foods and allergen detection techniques

In recent years,the prevalence of allergens in food warning notices,both domestically and internationally,has become the second leading concern after microbial contamination.Among the various factors that threaten human health reported by the World Health Organization,food allergy ranks fourth,and food allergy has become a global security problem.As of now,no definitive treatment for food allergies exists,making the avoidance of allergen-containing foods the most effective prevention method.Consequently,labeling foods with allergen information serves as a crucial warning for allergic populations.Moreover,to enhance comprehension of food allergies,this article provides a brief overview of their definition and sensitization mechanisms.The main focus lies in highlighting the structure of primary allergens found in eight commonly allergenic foods and the resulting clinical symptoms they cause.Additionally,a summary of commonly employed allergen detection techniques is presented,with an analysis of their principles,advantages,and limitations.Looking ahead,the integration of diverse technological approaches to establish an efficient,accurate,and affordable allergen detection method remains a significant trend.This article has certain reference value for understanding the direction of food allergies.

Effect of carbon and nitrogen ratio control on Artemia growth, water quality, biofloc microbial diversity under high salinity and zero-water exchange culture condition

Biofloc technology has been applied successfully in the intensive aquaculture of several fish and shrimp species. The growth of heterotrophic microorganisms can be stimulated through adding extra carbon, which reduces the nitrogen level in the water and provides microbial protein to the animals. However, most of the studies and practical applications have been conducted in freshwater and marine environment. This paper focused on brine shrimp Artemia that lives in high salinity environment together with other halophilic or halotolerant microorganisms. The effect of carbon supplementation on Artemia growth, water quality, and microbial diversity of biofl ocs was studied in the closed culture condition without any water exchange. The salinity of the culture medium was 100. A 24-d culture trial was conducted through supplementing sucrose at carbon/nitrogen (C/N) ratio of 5, 15, and 30 (Su5, Su15, and Su30), respectively. The culture without adding sucrose was used as a control. Artemia was fed formulated feed at a feeding ration of 60% recommended feeding level. The results showed that sucrose supplementation at higher C/N ratio (15 and 30) signifi cantly improved the Artemia survival, growth and water quality ( P <0.05). Addition of sucrose at C/N ratio of 15 and 30 significantly increased biofloc volume (BFV)( P <0.05). The Illumina MiSeq sequencing analysis showed that supplementing carbon at C/N ratio of 15 had a better total bacterial diversity and richness, and shaped the microbial composition at genera level. This study should provide information for studying the mechanism of biofloc technology and its application in high salinity culture conditions.

Spatial and seasonal distribution of intertidal macrobenthos with their biomass and functional feeding guilds in the Naf River estuary, Bangladesh

The Naf River estuary is one of the most productive ecological ecosystems in Bangladesh providing an important feeding area for fishes and other aquatic animals.However,detailed information on macrobenthic communities is rarely available in this area.Our study focused on the seasonal and spatial variability of macrobenthic community structure with their biomass and functional guilds.In total,fortyseven taxa were identified under nine major groups and seven functional feeding guilds.Among macrobenthic taxa,Polychaeta was dominant in both seasons and all over the estuary contributing 60%of total benthos.The mean abundance of macrobenthos was higher during the pre-monsoon(2 972±1 994 inds./m^2)than the monsoon(1 572±361 inds./m^2)being maximum at mid-estuary region and minimum at upper and lower estuary regions.Of the diversity indices,density(P=0.01,P=0.003),the number of taxa(P=0.000 3,P=0.000 9)and Margalef′s Index(P=0.000 4,P=0.001)of macrobenthos were significantly different among stations and seasons.Shannon-Weiner index(P=0.009,P=0.12)and Pielou’s evenness index(P=0.03,P=0.14)had significant differences among stations but not among seasons.Cluster analysis suggested that distribution of macrofauna is strongly influenced by seasonality.Among the feeding types,carnivorous were found to be dominant at the upper and mid-estuarine regions,and herbivorous were at lower estuarine regions.Carnivorous species were dominant in both seasons.Omnivores have shown to be the most abundant feeding type in terms of biomass though herbivores were highest during monsoon.

Thermodynamic modeling and phase diagram prediction of salt lake brine systemsⅡ.Aqueous Li^(+)-Na^(+)-K^(+)-SO_(4)^(2-) and its subsystems

It is still a challenging task to accurately and temperature-continuously express the thermodynamic properties and phase equilibrium behaviors of the salt-lake brine with multi-component,multitemperature and high concentration.The essential subsystem of sulfate type brine,aqueous Li^(+)-Na^(+)-K^(+)-SO_(4)^(2-) and its subsystems across a temperature range from 250 K to 643 K are investigated with the improved comprehensive thermodynamic model.Liquid parameters(Δg_(IJ),Δh_(IJ),and ΔC_(p,IJ))associated with the contributions of Gibbs energy,enthalpy,and heat capacity to the binary interaction parameters,i.e.the temperature coefficients of eNRTL parameters formulated with a Gibbs Helmholtz expression,are determined via multi-objective optimization method.The solid constantsΔ_(f)G_(k)°^((298.15))andΔ_(f)H_(k)°^((298.15))of11 solid species occurred in the quaternary system are rebuilt from multi-temperature solubilities.The modeling results show the accurate representation of(1)solution properties and binary phase diagram at temperature ranges from eutectic points to 643 K;(2)isothermal phase diagrams for Li_(2)SO_(4)-Na_(2)SO_(4)-H_(2)O,Li_(2)SO_(4)-K_(2)SO_(4)-H_(2)O and Na_(2)SO_(4)-K_(2)SO_(4)-H_(2)O ternary systems.The predicted results of complete structure and polythermal phase diagram of ternary systems and the isothermal phase diagrams of quaternary system excellently match with the experimental data.

A second modified normalized difference water index(SMNDWI) in the case of extracting the shoreline

Due to the fast development of industrialization and urbanization, shorelineextraction is necessary for the sustainable development and environment protection inmany countries. This study focused on the accurate methods of extracting theinstantaneous waterline —shoreline obtained as the same instant as the satellite imageis acquired. Based on NDWI (Normalized Difference Water Index) and MNDWI(Modified Normalized Difference Water Index), the study changed the bandcombination and proposed a second modified normalized water index (SMNDWI) toextract the waterline. And, this new index is applied to three types of coast to evaluatethe performance of this method with traditional ones. Results show that SNDWI isbetter than NDWI and suitable for applying to the waterline extraction.

Eff ect of polystyrene microplastics and temperature on growth,intestinal histology and immune responses of brine shrimp Artemia franciscana

Microplastics pollution and seawater temperature rise have been the major environmental issues,threatening the survival and biodiversity of marine organisms.This study evaluated the combined effect of temperature and polystyrene microplastics(MP)on Artemia,a filter-feeding crustacean that is widely used for environmental toxicology studies.Brine shrimp Artemia franciscana were exposed to three MP concentrations(0,0.2,and 2.0 mg/L)and three temperatures(22,26,and 30℃)for 14 d.In general,higher MP concentration and temperature led to a decreased survival rate and growth.Two-way ANOVA analysis indicated that the survival rate of Artemia was significantly impacted by both MP concentration and temperature(P<0.05),but there was no significant interaction between two factors(P>0.05).Growth of Artemia was significantly impacted by temperature(P<0.05),and with a significant interaction between two factors(P<0.05).Furthermore,the enzymatic activity,intestinal histological analyses,and immune gene expression were determined for Artemia reared at 30℃ with three MP concentrations(0,0.2,and 2.0 mg/L).The results showed that 2.0-mg/L MP resulted in reduced Artemia intestinal microvilli and exfoliated epithelia cells,significantly increased acid phosphatase(ACP)activity(P<0.05)and immunerelated gene ADRA1 B and CREB3 expression,revealing that higher MP concentration could induce oxidative and immunological stress on Artemia at 30℃.Overall,our study suggests that MP and temperature have combined adverse effect on Artemia,especially at relatively high temperature and polystyrene MP concentration.These findings are important to understand the potential ecological risks posed by these two factors on the organisms in marine environment.

Physicochemical conditions in affecting the distribution of spring phytoplankton community

To better understand the physicochemical conditions in af fecting regional distribution of phytoplankton community, one research cruise was carried out in the Bohai Sea and Yellow Sea during 3 rd and 23 th May, 2010. The phytoplankton community, including Bacillariophyta(105 taxa), Pyrrophyta(54 taxa), Chrysophyta(1 taxon) and Chlorophyta(2 taxa), had been identified and clearly described from six ecological provinces. And, the six ecological provinces were partitioned based on the top twenty dominant species related with notable physicochemical parameters. In general, the regional distributions of phytoplankton ecological provinces were predominantly influenced by the physicochemical properties induced by the variable water masses and circulations. The predominant diatoms in most of water samples showed well adaptability in turbulent and eutrophic conditions. However, several species of dinoflagellates e.g., Protoperidinium conicum, Protoperidinium triestinum, Protoperidinium sp. and Gymnodinium lohmanni preferred warmer, saltier and nutrient-poor environment. Moreover, the dinoflagellates with high frequency in the Yellow Sea might be transported from the Yellow Sea Warm Current. The horizontal distribution of phytoplankton was depicted by diatoms and controlled by phosphate concentration, while the vertical distribution was mainly supported by light and nutrients availability in the subsurface and bottom layers, respectively.

Phytoplankton Species Composition of Four Ecological Provinces in Yellow Sea, China

The ecological province based on phytoplankton species composition is important to understanding the interplay between environmental parameters and phytoplankton species composition. The aim of this study was to establish phytoplankton species composition ecological pattern thus elucidate the relationship between environmental factors and the phytoplankton species composition in the ecological provinces. Phytoplankton samples were collected from 31 stations in Yellow Sea(121.00?–125.00?E, 32.00?–39.22?N) in November 2014. The samples were enumerated and identified with the Uterm?hl method under an optical inverted microscope-AE2000 with magnifications of 200 × or 400 ×. In the present study, a total of 141 taxa belonging to 60 genera of 4 phyla of phytoplankton were identified, among them 101 species of 45 genera were Bacillariophyta, 36 species of 11 genera were Dinophyta, 3 species of 3 genera were Chrysophyta and 1 species of 1 genera was Chlorophyta. The study area was divided into 4 ecological provinces according to an unsupervised cluster algorithm applied to the phytoplankton biomass. A T-S(Temperature-Salinity) scatter diagram depicted with data of water temperature and salinity defined by environmental provinces matched well with the ecological provinces. The results of Canonical Correspondence Analysis(CCA) indicated that the phytoplankton species composition was mainly correlated with temperature, salinity and silicate concentration in the studied area. A method of establishing ecological provinces is useful to further understanding the environmental effects on the marine phytoplankton species composition and the consequent marine biogeochemistry.