Background:In biological systems,biological diversity often displays a rapid turn-over across elevations.This defining feature has made mountains classic systems for studying the spatial variation in diversity.Because...Background:In biological systems,biological diversity often displays a rapid turn-over across elevations.This defining feature has made mountains classic systems for studying the spatial variation in diversity.Because patterns of elevational diversity can vary among lineages and mountain systems it remains difficult to extrapolate findings from one montane region to another,or among lineages.In this study,we assessed patterns and drivers of avian diversity along an elevational gradient on the eastern slope of Mt.Gongga,the highest peak in the Hengduan Mountain Range in central China,and a mountain where comprehensive studies of avian diversity are still lacking.Methods:We surveyed bird species in eight 400-m elevational bands from 1200 to 4400 m a.s.l.between 2012 and 2017.To test the relationship between bird species richness and environmental factors,we examined the relative importance of seven ecological variables on breeding season distribution patterns:land area(LA),mean daily temperature(MDT),seasonal temperature range(STR),the mid-domain effect(MDE),seasonal precipitation(SP),invertebrate biomass(IB) and enhanced vegetation index(EVI).Climate data were obtained from five local meteorological stations and three temperature/relative humidity smart sensors in 2016.Results:A total of 219 bird species were recorded in the field,of which 204 were recorded during the breeding season(April–August).Species richness curves(calculated separately for total species,large-ranged species,and smallranged species) were all hump-shaped.Large-ranged species contributed more to the total species richness pattern than small-ranged species.EVI and IB were positively correlated with total species richness and small-ranged species richness.LA and MDT were positively correlated with small-ranged species richness,while STR and SP were negatively correlated with small-ranged species richness.MDE was positively correlated with large-ranged species richness.When we considered the combination of candidate factors using multiple regression models and model-averaging,total species richness and large-ranged species richness were correlated with STR(negative) and MDE(positive),while small-ranged species richness was correlated with STR(negative) and IB(positive).Conclusions:Although no single key factor or suite of factors could explain patterns of diversity,we found that MDE,IB and STR play important but varying roles in shaping the elevational richness patterns of different bird species categories.Model-averaging indicates that small-ranged species appear to be mostly influenced by IB,as opposed to large-ranged species,which exhibit patterns more consistent with the MDE model.Our data also indicate that the species richness varied between seasons,offering a promising direction for future work.展开更多
New replacement names for the preoccupied mite genera Absentia Huang, 2001 and Venilia Kuznetsov, 1979 are proposed (Huangiella nom. nov. and Kuznetsovia nom. nov., respectively.). Fourteen further new replacement nam...New replacement names for the preoccupied mite genera Absentia Huang, 2001 and Venilia Kuznetsov, 1979 are proposed (Huangiella nom. nov. and Kuznetsovia nom. nov., respectively.). Fourteen further new replacement names are proposed for additional preoccupied generic names in the Arthropoda. These names are: Vailimia nom. nov., Millidgella nom. nov., and Nolavia nom. nov. in Araneae, Vadumasonium nom. nov. in Hymenoptera, Gridellia nom. nov., Vanstaronia nom. nov. and Veraniella nom. nov. in Coleoptera, Poletaevega nom. nov. in Trilobita, Vandelia nom. nov. in Isopoda, Gandoa nom. nov. and Vanuachela nom. nov. in Decapoda, and Crasquinia nom. nov., Oertlia nom. nov., and Soleaua nom. nov. in Ostracoda. Additionally, one new annelid replacement name, Omodeodrilus nom. nov., is proposed.展开更多
Staphylinoidea(Insecta:Coleoptera)is one of the most species-rich groups in animals,but its huge diversity can hardly be explained by the popular hypothesis(co-radiation with angiosperms)that applies to phytophagous b...Staphylinoidea(Insecta:Coleoptera)is one of the most species-rich groups in animals,but its huge diversity can hardly be explained by the popular hypothesis(co-radiation with angiosperms)that applies to phytophagous beetles.We estimated the evolutionary mode of staphylinoid beetles and investigated the relationship between the evolutionary mode and palaeoclimate change,and thus the factors underlying the current biodiversity pattern of staphylinoid beetles.Our results demonstrate that staphylinoid beetles originated at around the Triassic-Jurassic bound and the current higher level clades underwent rapid evolution(indicated by increased diversification rate and decreased body size disparity)in the Jurassic and in the Cenozoic,both with low-energy climate,and they evolved much slower during the Cretaceous with high-energy climate.Climate factors,especially low 02 and high C02,promoted the diversification rate and among-clade body size disparification in the Jurassic.In the Cenozoic,however,climate factors had negative associations with diversification rate but little with body size disparification.Our present study does not support the explosion of staphylinoid beetles as a direct outcome of the Cretaceous Terrestrial Revolution(KTR).We suppose that occupying and diversifying in refuge niches associated with litter may elucidate rapid radiations of staphylinoid beetles in low-energy conditions.展开更多
Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each funga...Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each fungal species can have one nomenclaturally correct name in a particular classification.All other previously used names for this species will be considered as synonyms.The older generic epithet takes priority over the younger name.Any widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic genera.In the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future usage.The taxonomic placements of 1261 genera are listed as an outline.Protected names and suppressed names for 34 pleomorphic genera are listed separately.Notes and justifications are provided for possible proposed names after the list of genera.Notes are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.展开更多
Following a large-scale phylogenetic study of the lichenized genus Cora(Basidiomycota:Agaricales:Hygrophoraceae),we formally describe 70 new species,honouring the seventieth birthday of David Leslie Hawksworth,one of ...Following a large-scale phylogenetic study of the lichenized genus Cora(Basidiomycota:Agaricales:Hygrophoraceae),we formally describe 70 new species,honouring the seventieth birthday of David Leslie Hawksworth,one of the preeminent figures in mycology and lichenology in the past 50 years.Based on an updated phylogeny using the ITS fungal barcoding locus,we now recognize 189 taxa in a genus that until recently was considered to represent a single species;including this contribution,92 of these are formally recognized,including five taxa based on historical names or collections that have not been sequenced.Species of Cora can be recognized by a combination of morphological(size,colour,lobe configuration,surface hairs,hymenophore size and shape),anatomical(thallus thickness,cortex structure,photobiont type,hyphal papillae),and ecogeographical features(substrate,habitat,distribution),and a keytable allowing the identification of all accepted taxa is provided.The new species are:Cora accipiter Moncada,Madrin˜a´n&Lücking spec.nov.,C.applanata Moncada,Soto-Medina&Lücking spec.nov.,C.arachnodavidea Moncada,Dal Forno&Lücking spec.nov.,C.arborescens Dal Forno,Chaves&Lücking spec.nov.,C.arcabucana Moncada,C.Rodrı´guez&Lücking spec.nov.,C.aturucoa Lücking,Moncada&C.Vargas spec.nov.,C.auriculeslia Moncada,Ya´nez-Ayabaca&Lücking spec.nov.,C.barbifera Moncada,Patin˜o&Lücking spec.nov.,C.boleslia Lücking,E.Morales&Dal Forno spec.nov.,C.caliginosa Holgado,Rivas Plata&Perlmutter spec.nov.,C.campestris Dal Forno,Eliasaro&Spielmann spec.nov.,C.canari Nugra,Dal Forno&Lücking spec.nov.,C.caraana Lücking,Martins&Lucheta spec.nov.,C.casasolana Moncada,R.-E.Pe´rez&Lücking spec.nov.,C.caucensis Moncada,M.Gut.&Lücking spec.nov.,C.celestinoa Moncada,CabreraAmaya&Lücking spec.nov.,C.comaltepeca Moncada,R.-E.Pe´rez&Herrera-Camp.spec.nov.,C.corani Lücking,E.Morales&Dal Forno spec.nov.,C.corelleslia Moncada,A.Sua´rez-Corredor&Lücking spec.nov.,C.crispoleslia Moncada,J.Molina&Lücking spec.nov.,C.cuzcoensis Holgado,Rivas Plata&Perlmutter spec.nov.,C.dalehana Moncada,Madrin˜a´n&Lücking spec.nov.,C.davibogotana Lücking,Moncada&Coca spec.nov.,C.davicrinita Moncada,Madrin˜a´n&Lücking spec.nov.,C.davidia Moncada,L.Vargas&Lücking spec.nov.,C.dewisanti Moncada,A.Sua´rez-Corredor&Lücking spec.nov.,C.dulcis Moncada,R.-E.Pe´rez&Lücking spec.nov.,C.elephas Lücking,Moncada&L.Vargas spec.nov.,C.fuscodavidiana Lücking,Moncada&L.Vargas spec.nov.,C.garagoa Simijaca,Moncada&Lücking spec.nov.,C.gigantea Lücking,Moncada&Coca spec.nov.,C.gomeziana Dal Forno,Chaves&Lücking spec.nov.,C.guajalitensis Lücking,Robayo&Dal Forno spec.nov.,C.hafecesweorthensis Moncada,Lücking&R.Pela´ez spec.nov.,C.haledana Dal Forno,Chaves&Lücking spec.nov.,C.hawksworthiana Dal Forno,P.Nelson&Lücking spec.nov.,C.hochesuordensis Lücking,E.Morales&Dal Forno spec.nov.,C.hymenocarpa Lücking,Chaves&Lawrey spec.nov.,C.imi Lücking,Chaves&Lawrey spec.nov.,C.itabaiana Dal Forno,Aptroot&M.Ca´ceres spec.nov.,C.leslactuca nov.,C.maxima Wilk,Dal Forno&Lücking spec.nov.,C.minutula Lücking,Moncada&Ya´nez-Ayabaca spec.nov.,C.palaeotropica Weerakoon,Aptroot&Lücking spec.nov.,C.palustris Dal Forno,Chaves&Lücking spec.nov.,C.parabovei Dal Forno,Kukwa&Lücking spec.nov.,C.paraciferrii Lücking,Moncada&J.E.Hern.spec.nov.,C.paraminor Dal Forno,Chaves&Lücking spec.nov.,C.pastorum Moncada,Patin˜o&Lücking spec.nov.,C.pichinchensis Paredes,Jonitz&Dal Forno spec.nov.,C.pikynasa J.-M.Torres,Moncada&Lücking spec.nov.,C.pseudobovei Wilk,Dal Forno&Lücking spec.nov.,C.pseudocorani Lücking,E.Morales&Dal Forno spec.nov.,C.putumayensis L.J.Arias,Moncada&Lücking spec.nov.,C.quillacinga Moncada,F.Ortega&Lücking spec.nov.,C.rothesiorum Moncada,Madrin˜a´n&Lücking spec.nov.,C.rubrosanguinea Nugra,Moncada&Lücking spec.nov.,C.santacruzensis Dal Forno,Bungartz&Ya´nezAyabaca,spec.nov.,C.schizophylloides Moncada,C.Rodrı´guez&Lücking spec.nov.,C.smaragdina Lücking,Rivas Plata&Chaves spec.nov.,C.soredavidia Dal Forno,Marcelli&Lücking spec.nov.,C.subdavicrinita Moncada,J.Molina&Lücking spec.nov.,C.suturifera Nugra,Besal&Lücking spec.nov.,C.terrestris Dal Forno,Chaves&Lücking spec.nov.,C.terricoleslia Wilk,Dal Forno&Lücking spec.nov.,C.udebeceana Moncada,R.Pela´ez&Lücking,Moncada&R.Pela´ez spec.Lücking spec.nov.,C.urceolata Moncada,Coca&Lücking spec.nov.,C.verjonensis Lücking,Moncada&Dal Forno spec.nov.,C.viliewoa Lücking,Chaves&Soto-Medina spec.nov.,and C.yukiboa Mercado-Dı´az,Moncada&Lücking spec.nov.Furthermore,the taxonomic status of the recently described or recognized species C.arachnoidea,C.aspera,C.ciferrii,and C.reticulifera,is revised.展开更多
Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states com...Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states comprising important plant pathogens.They are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous fungi.They occur in terrestrial,freshwater and marine habitats in almost every part of the world.We accept 105 families in Dothideomycetes with the new families Anteagloniaceae,Bambusicolaceae,Biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this paper.Each family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also characterized.Each family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and Strigulales.The paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to light.It is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.展开更多
More than twenty species of lichenicolous fungi have been described in Phoma,a large anamorphic genus of primarily plant-associated pathogens with broad geographic distributions.We obtained nuclear and mitochondrial r...More than twenty species of lichenicolous fungi have been described in Phoma,a large anamorphic genus of primarily plant-associated pathogens with broad geographic distributions.We obtained nuclear and mitochondrial rDNA sequences from 19 fungal cultures isolated from specimens representing four described and two undescribed lichenicolous species in the genus.Our multilocus phylogeny indicates that lichenicolous Phoma species represent at least two phylogenetically distinct clades in the Phaeosphaeriaceae,one including a new species,Phoma puncteliae,isolated from a specimen of Punctelia rudecta collected inMaryland,USA,and another group of primarily lichenicolous species.This latter group includes four described lichenicolous Phoma species,an unidentified melanized rock fungus,and a new lichenicolous Phoma species isolated from Xanthomendoza species collected in Canada that we are naming P.xanthomendozae.Some specimens in this clade collected from different lichen genera and species were found to be very similar genetically,which calls into question the recent practice of recognizing lichenicolous Phoma species mainly by differences in host preference.展开更多
基金supported by the National Natural Science Foundation of China Granted to Yongjie Wu(No.31501851,31772478)the Chinese Academy of Sciences Visiting Professorship for Senior International Scientists to Per Alstrom(No.2011T2S04)
文摘Background:In biological systems,biological diversity often displays a rapid turn-over across elevations.This defining feature has made mountains classic systems for studying the spatial variation in diversity.Because patterns of elevational diversity can vary among lineages and mountain systems it remains difficult to extrapolate findings from one montane region to another,or among lineages.In this study,we assessed patterns and drivers of avian diversity along an elevational gradient on the eastern slope of Mt.Gongga,the highest peak in the Hengduan Mountain Range in central China,and a mountain where comprehensive studies of avian diversity are still lacking.Methods:We surveyed bird species in eight 400-m elevational bands from 1200 to 4400 m a.s.l.between 2012 and 2017.To test the relationship between bird species richness and environmental factors,we examined the relative importance of seven ecological variables on breeding season distribution patterns:land area(LA),mean daily temperature(MDT),seasonal temperature range(STR),the mid-domain effect(MDE),seasonal precipitation(SP),invertebrate biomass(IB) and enhanced vegetation index(EVI).Climate data were obtained from five local meteorological stations and three temperature/relative humidity smart sensors in 2016.Results:A total of 219 bird species were recorded in the field,of which 204 were recorded during the breeding season(April–August).Species richness curves(calculated separately for total species,large-ranged species,and smallranged species) were all hump-shaped.Large-ranged species contributed more to the total species richness pattern than small-ranged species.EVI and IB were positively correlated with total species richness and small-ranged species richness.LA and MDT were positively correlated with small-ranged species richness,while STR and SP were negatively correlated with small-ranged species richness.MDE was positively correlated with large-ranged species richness.When we considered the combination of candidate factors using multiple regression models and model-averaging,total species richness and large-ranged species richness were correlated with STR(negative) and MDE(positive),while small-ranged species richness was correlated with STR(negative) and IB(positive).Conclusions:Although no single key factor or suite of factors could explain patterns of diversity,we found that MDE,IB and STR play important but varying roles in shaping the elevational richness patterns of different bird species categories.Model-averaging indicates that small-ranged species appear to be mostly influenced by IB,as opposed to large-ranged species,which exhibit patterns more consistent with the MDE model.Our data also indicate that the species richness varied between seasons,offering a promising direction for future work.
文摘New replacement names for the preoccupied mite genera Absentia Huang, 2001 and Venilia Kuznetsov, 1979 are proposed (Huangiella nom. nov. and Kuznetsovia nom. nov., respectively.). Fourteen further new replacement names are proposed for additional preoccupied generic names in the Arthropoda. These names are: Vailimia nom. nov., Millidgella nom. nov., and Nolavia nom. nov. in Araneae, Vadumasonium nom. nov. in Hymenoptera, Gridellia nom. nov., Vanstaronia nom. nov. and Veraniella nom. nov. in Coleoptera, Poletaevega nom. nov. in Trilobita, Vandelia nom. nov. in Isopoda, Gandoa nom. nov. and Vanuachela nom. nov. in Decapoda, and Crasquinia nom. nov., Oertlia nom. nov., and Soleaua nom. nov. in Ostracoda. Additionally, one new annelid replacement name, Omodeodrilus nom. nov., is proposed.
基金国家自然科学青年基金项目(31501851)四川大学优秀青年教师名师名校访学项目+9 种基金环保部生物多样性示范监测项目生物安全监测系统应用模拟与示范推广项目(2016YFC12000705)中国科学院国际高级访问学者项目(2011T2S04)National Geographic Society/Waitt FundFunds from the American Philosophical Societythe American Museum of Natural Historythe American Ornithologists’ Unionthe Society for the Study of Evolutionthe Paulson Institutethe Animal Behavior Society等项目
基金the National Natural Science Foundation of China(NSFC-31501883 to L.L.,NSFC-31472036 to H.-Z.Z.)the Youth Top-notch Talent Support Program of Hebei Province to L.L.(BJ2018057)+2 种基金the Biodiversity Survey and Assessment Project of the Ministry of Ecology and Environment,China to H.-Z.Z.(2019H J2096001006)a grant from the Key Laboratory of the Zoological Systematics and Evolution of the Chinese Academy of Sciences to H.-Z.Z(Y 229Y X5105)a grant from the Strategic Priority Research Program of the Chinese Academy of Sciences to CY.C.(XD B26000000).
文摘Staphylinoidea(Insecta:Coleoptera)is one of the most species-rich groups in animals,but its huge diversity can hardly be explained by the popular hypothesis(co-radiation with angiosperms)that applies to phytophagous beetles.We estimated the evolutionary mode of staphylinoid beetles and investigated the relationship between the evolutionary mode and palaeoclimate change,and thus the factors underlying the current biodiversity pattern of staphylinoid beetles.Our results demonstrate that staphylinoid beetles originated at around the Triassic-Jurassic bound and the current higher level clades underwent rapid evolution(indicated by increased diversification rate and decreased body size disparity)in the Jurassic and in the Cenozoic,both with low-energy climate,and they evolved much slower during the Cretaceous with high-energy climate.Climate factors,especially low 02 and high C02,promoted the diversification rate and among-clade body size disparification in the Jurassic.In the Cenozoic,however,climate factors had negative associations with diversification rate but little with body size disparification.Our present study does not support the explosion of staphylinoid beetles as a direct outcome of the Cretaceous Terrestrial Revolution(KTR).We suppose that occupying and diversifying in refuge niches associated with litter may elucidate rapid radiations of staphylinoid beetles in low-energy conditions.
基金the Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botanya research grant from the Biodiversity Research and Training Program(BRT R253012)+2 种基金The Thailand Research Fund(BRG 5280002)The International Scientific Cooperated Project of Guizhou Province(No[2013]7004)funding from the Spanish Ministerio de Ciencia e Innovación project CGL2011-25003.
文摘Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each fungal species can have one nomenclaturally correct name in a particular classification.All other previously used names for this species will be considered as synonyms.The older generic epithet takes priority over the younger name.Any widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic genera.In the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future usage.The taxonomic placements of 1261 genera are listed as an outline.Protected names and suppressed names for 34 pleomorphic genera are listed separately.Notes and justifications are provided for possible proposed names after the list of genera.Notes are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.
基金This study was partially supported by three grants from the National Science Foundation:TICOLICHEN-The Costa Rican Lichen Biodiversity Inventory(DEB 0206125 to The Field MuseumPI Robert Lücking)+12 种基金Neotropical Epiphytic Microlichens-An Innovative Inventory of a Highly Diverse yet Little Known Group of Symbiotic Organisms(DEB 0715660 to The Field MuseumPI R.Lücking)Phylogenetic Diversity of Mycobionts and Photobionts in the Cyanolichen Genus Dictyonema,with Emphasis on the Neotropics and the Galapagos Islands(DEB 0841405 to George Mason UniversityPI J.LawreyCo-PIs:R.Lücking,P.Gillevet).The Verein der Freunde des Botanischen Gartens und Botanischen Museums Berlin-Dahlem e.V.(https://www.bgbm.org/de/BGBM/freunde/index.html)supported molecular sequencing work for specimens collected as part of the Pilotprojekt Kooperation mit dem Botanischen Garten Bogotá(BMBF,see below).The Universidad Distrital Francisco Jose´de Caldas,Bogota´,is thanked for the support to the lichen herbarium and the curatorial work of the UDBC collections.The Jardı´n Bota´nico de Bogota´Jose´Celestino Mutis organized field trips to Sumapaz,Pen˜a Blanca,and Pasquilla(Bogota´),by agreement with the Botanical Garden and Botanical Museum Berlin,partially financed through the German Federal Ministry of Education and Research(BMBFPilotprojekt Kooperation mit dem Botanischen Garten BogotáForderkennzeichen:01DN13030).The Universidad de los Andes,Bogota´,provided logistic support for field work in Chingaza.Fe´lix Fernandez,owner of El Secreto Private Reserve in Garagoa,Colombia,is thanked for providing access to the area.The Galapagos Lichen Inventory acknowledges support by successive science directors of the Charles Darwin Foundation(Alan Tye,Mark Gardener,Rodolfo Martinez,Ulf Hardter,and Noemi d’Ozouville)executive director Arturo Izurieta.Frank Bungartz and collaborators are further indebted to the Directorate of the Galapagos National Park(particular Galo Quezada and Victor Carrio´n,granting specimen export permits)This publication is contribution no.2145 of the Charles Darwin Foundation for the Galapagos Islands.The Conselho Nacional de Desenvolvimento Cientı´fico e Tecnolo´gico(CNPq)is thanked for research grants and field trip fundings(Processos 311706/2012-6,401186/2014-8CNPq-Sisbiota 563342/2010-2)M.Ca´ceresPVE grant(Processo 314570/2014-4)M.Ca´ceres and R.Lücking.Research by G.Weerakoon was funded by the National Geographic Society and Dilmah Conservation,and G.Weerakoon would like to thank Thorsten Lumbsch,Pat Wolseley,Omal Arachchige,Dushantha Wasala and Dulan Vidanapathirana for further support.Research by K.Wilk was funded by the W.Szafer Institute of Botany,Polish Academy of Sciences,through a statutory fund.We are indebted to the Gala´pagos National Park,especially its technical director,Washington Tapia,for support and specimen export permits.Material from Costa Rica was also collected during two lichen courses of the Organization for Tropical Studies(OTS).Paul M.Kirk assisted with batch registration of the new species on Index Fungorum and Subashini C.Jayasiri with batch registration on Faces of Fungi.
文摘Following a large-scale phylogenetic study of the lichenized genus Cora(Basidiomycota:Agaricales:Hygrophoraceae),we formally describe 70 new species,honouring the seventieth birthday of David Leslie Hawksworth,one of the preeminent figures in mycology and lichenology in the past 50 years.Based on an updated phylogeny using the ITS fungal barcoding locus,we now recognize 189 taxa in a genus that until recently was considered to represent a single species;including this contribution,92 of these are formally recognized,including five taxa based on historical names or collections that have not been sequenced.Species of Cora can be recognized by a combination of morphological(size,colour,lobe configuration,surface hairs,hymenophore size and shape),anatomical(thallus thickness,cortex structure,photobiont type,hyphal papillae),and ecogeographical features(substrate,habitat,distribution),and a keytable allowing the identification of all accepted taxa is provided.The new species are:Cora accipiter Moncada,Madrin˜a´n&Lücking spec.nov.,C.applanata Moncada,Soto-Medina&Lücking spec.nov.,C.arachnodavidea Moncada,Dal Forno&Lücking spec.nov.,C.arborescens Dal Forno,Chaves&Lücking spec.nov.,C.arcabucana Moncada,C.Rodrı´guez&Lücking spec.nov.,C.aturucoa Lücking,Moncada&C.Vargas spec.nov.,C.auriculeslia Moncada,Ya´nez-Ayabaca&Lücking spec.nov.,C.barbifera Moncada,Patin˜o&Lücking spec.nov.,C.boleslia Lücking,E.Morales&Dal Forno spec.nov.,C.caliginosa Holgado,Rivas Plata&Perlmutter spec.nov.,C.campestris Dal Forno,Eliasaro&Spielmann spec.nov.,C.canari Nugra,Dal Forno&Lücking spec.nov.,C.caraana Lücking,Martins&Lucheta spec.nov.,C.casasolana Moncada,R.-E.Pe´rez&Lücking spec.nov.,C.caucensis Moncada,M.Gut.&Lücking spec.nov.,C.celestinoa Moncada,CabreraAmaya&Lücking spec.nov.,C.comaltepeca Moncada,R.-E.Pe´rez&Herrera-Camp.spec.nov.,C.corani Lücking,E.Morales&Dal Forno spec.nov.,C.corelleslia Moncada,A.Sua´rez-Corredor&Lücking spec.nov.,C.crispoleslia Moncada,J.Molina&Lücking spec.nov.,C.cuzcoensis Holgado,Rivas Plata&Perlmutter spec.nov.,C.dalehana Moncada,Madrin˜a´n&Lücking spec.nov.,C.davibogotana Lücking,Moncada&Coca spec.nov.,C.davicrinita Moncada,Madrin˜a´n&Lücking spec.nov.,C.davidia Moncada,L.Vargas&Lücking spec.nov.,C.dewisanti Moncada,A.Sua´rez-Corredor&Lücking spec.nov.,C.dulcis Moncada,R.-E.Pe´rez&Lücking spec.nov.,C.elephas Lücking,Moncada&L.Vargas spec.nov.,C.fuscodavidiana Lücking,Moncada&L.Vargas spec.nov.,C.garagoa Simijaca,Moncada&Lücking spec.nov.,C.gigantea Lücking,Moncada&Coca spec.nov.,C.gomeziana Dal Forno,Chaves&Lücking spec.nov.,C.guajalitensis Lücking,Robayo&Dal Forno spec.nov.,C.hafecesweorthensis Moncada,Lücking&R.Pela´ez spec.nov.,C.haledana Dal Forno,Chaves&Lücking spec.nov.,C.hawksworthiana Dal Forno,P.Nelson&Lücking spec.nov.,C.hochesuordensis Lücking,E.Morales&Dal Forno spec.nov.,C.hymenocarpa Lücking,Chaves&Lawrey spec.nov.,C.imi Lücking,Chaves&Lawrey spec.nov.,C.itabaiana Dal Forno,Aptroot&M.Ca´ceres spec.nov.,C.leslactuca nov.,C.maxima Wilk,Dal Forno&Lücking spec.nov.,C.minutula Lücking,Moncada&Ya´nez-Ayabaca spec.nov.,C.palaeotropica Weerakoon,Aptroot&Lücking spec.nov.,C.palustris Dal Forno,Chaves&Lücking spec.nov.,C.parabovei Dal Forno,Kukwa&Lücking spec.nov.,C.paraciferrii Lücking,Moncada&J.E.Hern.spec.nov.,C.paraminor Dal Forno,Chaves&Lücking spec.nov.,C.pastorum Moncada,Patin˜o&Lücking spec.nov.,C.pichinchensis Paredes,Jonitz&Dal Forno spec.nov.,C.pikynasa J.-M.Torres,Moncada&Lücking spec.nov.,C.pseudobovei Wilk,Dal Forno&Lücking spec.nov.,C.pseudocorani Lücking,E.Morales&Dal Forno spec.nov.,C.putumayensis L.J.Arias,Moncada&Lücking spec.nov.,C.quillacinga Moncada,F.Ortega&Lücking spec.nov.,C.rothesiorum Moncada,Madrin˜a´n&Lücking spec.nov.,C.rubrosanguinea Nugra,Moncada&Lücking spec.nov.,C.santacruzensis Dal Forno,Bungartz&Ya´nezAyabaca,spec.nov.,C.schizophylloides Moncada,C.Rodrı´guez&Lücking spec.nov.,C.smaragdina Lücking,Rivas Plata&Chaves spec.nov.,C.soredavidia Dal Forno,Marcelli&Lücking spec.nov.,C.subdavicrinita Moncada,J.Molina&Lücking spec.nov.,C.suturifera Nugra,Besal&Lücking spec.nov.,C.terrestris Dal Forno,Chaves&Lücking spec.nov.,C.terricoleslia Wilk,Dal Forno&Lücking spec.nov.,C.udebeceana Moncada,R.Pela´ez&Lücking,Moncada&R.Pela´ez spec.Lücking spec.nov.,C.urceolata Moncada,Coca&Lücking spec.nov.,C.verjonensis Lücking,Moncada&Dal Forno spec.nov.,C.viliewoa Lücking,Chaves&Soto-Medina spec.nov.,and C.yukiboa Mercado-Dı´az,Moncada&Lücking spec.nov.Furthermore,the taxonomic status of the recently described or recognized species C.arachnoidea,C.aspera,C.ciferrii,and C.reticulifera,is revised.
基金We also thank Siriporn Luesuwan for arranging the loan of specimens from various herbaria.A.Ariyawansa and J.C Kang are grateful to the International collaboration plan of Science and Technology at Guizhou Province(contract No.[2012]7006)the construction of innovation talent team of Science and Technology at Guizhou Province(contract No.[2012]4007)+19 种基金China.D.J.Bhat is thankful to MFU for a Visiting Professorship during the tenure of which this paper was finalized.D.L.Hawksworth contributed to this work while in receipt of support from the Spanish Ministerio de Ciencia e Innovación(CGL2011-25003)Haixia Wu would like to thank the Grant for Essential Scientific Research of National Non-profit Institute to funds for research(No.CAFYBB2007002)thanks Xiaoming Chen,Ying Feng and Chen Hang(The Research Institute of Resource Insects,Chinese Academy of Forestry,China)for their valuable help.Jian-Kui Liu would like to thank Manfred Binder for providing valuable suggestions and kind assistance on phylogenetic analysisWe would like to thank MFU grant No.56101020032 for funding to study taxonomy and phylogeny of selected families of DothideomycetesJiye Yan and Xinghong Li would like to thank CARS-30 for funds.K.Tanaka would like to thank the Japan Society for the Promotion of Science(JSPS,25440199)for financial supportK.L.Pang would like to thank National Science Council of Taiwan for financial support(NSC101-2621-B-019-001-MY3).L.Muggia is grateful to the Austrian Science Foundation for financial support(FWF,P24114-B16 and Herta-Firnberg Project T481-B20)M.Doilom would like to thank the Thailand Research Fund through the Royal Golden Jubilee(RGJ)Ph.D.Program grant No.Ph.D./0072/2553 in 4.S.M.F./53/A.2MP Nelsen and R Lücking are grateful to the NSF(DEB 0715660“Neotropical Epiphytic Microlichens-An Innovative Inventory of a Highly Diverse yet Little Known Group of Symbiotic Organisms”DEB 0717476“Systematics of Dothideomycetes”)MP Nelsen also acknowledges a Brown Family Fellowship through the Field Museum,a William Harper Rainey Fellowship through the University of Chicago,and support through the Committee on Evolutionary Biology at the University of Chicago.R.Phookamsak would like to thank the Royal Golden Jubilee Ph.D.Program(PHD/0090/2551)under the Thailand Research Fund for scholarship supportS.A.Alias would like to thank Program Rakan University Malaya(PRPUM)-Phylogeny,Taxonomy,Relationships and Biotechnological Potential of Sooty Moulds.S.Boonmee also thanks Amy Y.Rossman and the U.S.Department of Agriculture Agricultural Research Service,Systematic Mycology and Microbiology Lab(SMML)USA for laboratory,funding support and advice on her work.S.Boonmee and P.Chomnunti would like to thank TRF/BIOTEC program Biodiversity Research and Training Grant BRT R_251181,BRT R_253012the Mushroom Research Foundation,Chiang Rai Province for funding support.S.Wikee would like to thank the Thailand Research Fund through the Royal Golden Jubilee Ph.D.Program agreement No PhD/0198/2552S.Wikee and JK Liu would like to thank The National Research Council of Thailand(NRCT)for the award of grant No 55201020002 to study the genus Phyllosticta in ThailandS.Suetrong acknowledges the financial support by TRF/BIOTEC program Biodiversity Research and Training Grant BRT R_351004 and BRT R_325015 to study marine fungi of ThailandSuetrong also thanks Morakot Tanticharoen,Kanyawim Kirtikara and Lily Eurwilaichitr,BIOTEC,Bangkok for their continued interest and support.Supalak Yacharoen,J.Monkai and K.D.Hyde would like to thank the Thailand Research Fund(BRG5280002)for financial supportGareth Jones is supported by the Distinguished Scientist Fellowship Program(DSFP),King Saud University,Saudi Arabia.Y.Wang would like to thank The International Scientific Cooperated Project of Guizhou Province(No[2013]7004)Yongxiang Liu would like to thank the Guizhou Research Fund(QKHZYZ[2010]5031 and QNKYYZX[2012]010)for financial supportHarrie Sipman is thanked for comments on part of the manuscript.
文摘Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states comprising important plant pathogens.They are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous fungi.They occur in terrestrial,freshwater and marine habitats in almost every part of the world.We accept 105 families in Dothideomycetes with the new families Anteagloniaceae,Bambusicolaceae,Biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this paper.Each family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also characterized.Each family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and Strigulales.The paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to light.It is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.
基金We thank Peter Scholz for providing us with a copy of the original description of Phoma pisutii,and Walter Obermayer for searching for an isotype of P.pisutii.Sequencing partially supported by grant DEB 0841405 from the National Science FoundationMPN is supported by the Brown Family Graduate Fellowship through the Field Museum.
文摘More than twenty species of lichenicolous fungi have been described in Phoma,a large anamorphic genus of primarily plant-associated pathogens with broad geographic distributions.We obtained nuclear and mitochondrial rDNA sequences from 19 fungal cultures isolated from specimens representing four described and two undescribed lichenicolous species in the genus.Our multilocus phylogeny indicates that lichenicolous Phoma species represent at least two phylogenetically distinct clades in the Phaeosphaeriaceae,one including a new species,Phoma puncteliae,isolated from a specimen of Punctelia rudecta collected inMaryland,USA,and another group of primarily lichenicolous species.This latter group includes four described lichenicolous Phoma species,an unidentified melanized rock fungus,and a new lichenicolous Phoma species isolated from Xanthomendoza species collected in Canada that we are naming P.xanthomendozae.Some specimens in this clade collected from different lichen genera and species were found to be very similar genetically,which calls into question the recent practice of recognizing lichenicolous Phoma species mainly by differences in host preference.
