The Autographa californica multiple capsid nucleopolyhedrovirus (AcMNPV) was the first baculovirus for which the complete nucleotide sequence became known. Since then 15 years lapsed and much research has been perform...The Autographa californica multiple capsid nucleopolyhedrovirus (AcMNPV) was the first baculovirus for which the complete nucleotide sequence became known. Since then 15 years lapsed and much research has been performed to elucidate putative functions of the annotated open reading frames of this virus and this endeavour is still ongoing. AcMNPV is the most well-known and well-studied baculovirus species, not in the least for its application as a vector for the high-level expression of foreign genes in insect cells. This article is the first monograph of a single baculovirus and gives a current overview of what is known about the 151 AcMNPV ORFs, including (putative) function and temporal and spatial presence of transcripts and protein. To date 60 ORFs have a proven function, another 19 ORFs have homologs for which functions are known in other baculoviruses and 72 ORFs are still enigmatic. This paper should assist the reader in quickly finding the essentials of AcMNPV.展开更多
The decolorization of Direct Black 22 by Aspergillus ficuum has been studied. It was found that Aspergillus ficuum could effectively decolorize Direct Black 22 especially when grown as pelleted mycelia. Results showed...The decolorization of Direct Black 22 by Aspergillus ficuum has been studied. It was found that Aspergillus ficuum could effectively decolorize Direct Black 22 especially when grown as pelleted mycelia. Results showed that the media containing Direct Black 22 at 50 mg/L could be decolorized by 98.05% of the initial color in 24 h. The optimum pH and temperature of decolorization are 4.0 and 33 °C respectively. Aeration was quite beneficial to decolorization. Medium composition and the concentration of Direct Black 22 could affect the rate of decolorization. The dye degraded products assayed by UV-visible spectrophotometer and macroscopic observation showed that the decolorization of Direct Black 22 by mycelial pellets includes two important processes: bioadsorption and biodegradation. The degradation experiment agree with the Michaelis-Menten kinetics equation.展开更多
A pot experiment was conducted to study the effect of mycorrhiza, fungicides in difference concentration and there combination on growth and nutrients balance index of soya bean. Tow AM treatments including with and w...A pot experiment was conducted to study the effect of mycorrhiza, fungicides in difference concentration and there combination on growth and nutrients balance index of soya bean. Tow AM treatments including with and with out mycorrhiza and tow fungicides (parasmid and ant-arcol) each of them including four concentration (0.0, 0.25, 0.5 and 1 Kg·donum-1) were tested in factorial completely randomized design in the three replication. The results indicates that the higher value of total dry matter weight was recorded from combination treatment (F1M1C1) which attained 11.09 gm·pot-1 ,while the lower value 2.25 gm·pot-1 was produced by combination treatment (F2M2C3) ,however the same combination treatments was showed that the nitrogen ,phosphorus ,magnesium and iron in the shoot tissues in the mycorrhizal plant with lower concentration of fungicides were significantly greater (P -1, 251.00 mg·K-1) was recorded. The result of nutrient index and nutrient balance index revealed that the lower NBI (56.18) was recorded in combination treatments (F1M1C1), while the higher NBI (2033.81) was produced from combination treatments (F2M2C3), moreover the results shows significant negative correlation ship between NBI and total dry matter weight (r = -0.63*) .展开更多
In this work, sequential optimization strategy, based on statistical designs, was employed to enhance the production of α-amylase by Aspergillus niger ATCC 16404. This statistical study consists of optimizing the fac...In this work, sequential optimization strategy, based on statistical designs, was employed to enhance the production of α-amylase by Aspergillus niger ATCC 16404. This statistical study consists of optimizing the factors that influence the production of α-amylase of A. niger ATCC 16404. Indeed, another statistical study has allowed the selection of 5 factors (pH, starch, yeast extract, “corn steep liquor”, CaCl<sub>2</sub> and salts) affecting both the development of mould (biomass) and that of the enzyme production. The central composite design allows the determination of the optimum of these selected factors and a quadratic model explains the factor reaction. Thus, the “ridge analysis” method, has led to maximizing the experimental reaction. The results indicate that the production rate of α-amylase is maximized in the presence of starch at 8.97 g/l, yeast extract at 2.86 g/l, CaCl<sub>2</sub> at 1.224 g/l, salts (composed of 25% FeSO<sub>4</sub>, 7H<sub>2</sub>O, 25% MnSO<sub>4</sub> and 50% MgCl<sub>2</sub>, 6H<sub>2</sub>O): FeSO<sub>4</sub>, 7H<sub>2</sub>O, MnSO<sub>4</sub> 0.1518 g/l and MgCl<sub>2</sub>, 6H<sub>2</sub>O at 0.3036 g/l. As for the pH, it is maintained at the rate of 5.68.展开更多
Many hematopoietic malignancies have oncogenic gene fusions, like BCR-ABL, in their tumor-initiating cells. This implicates the product of the fusion as a powerful cancer-initiating event. In human prostate cancers, d...Many hematopoietic malignancies have oncogenic gene fusions, like BCR-ABL, in their tumor-initiating cells. This implicates the product of the fusion as a powerful cancer-initiating event. In human prostate cancers, despite the detection of numerous similar fusions,展开更多
Three related patients from Colombia presented with a juvenileonset neuronal c eroid lipofuscinosis. Electron microscopy of one case showed condensed fingerpri nt profiles, and genetic analyses identified a novel miss...Three related patients from Colombia presented with a juvenileonset neuronal c eroid lipofuscinosis. Electron microscopy of one case showed condensed fingerpri nt profiles, and genetic analyses identified a novel missense mutation in CLN5. The authors demonstrate the existence of pathogenic CLN5 mutations outside north ern Europe and that mutations in this gene can lead to an atypical late-onset n euronal ceroid lipofuscinosis disease, in addition to the late infantile form fi rst described inFinland.展开更多
The trend of fencing grassland as livestock paddocks is spreading on the Eurasian steppe,however,its impacts on grassland wildlife are little known.In order to explore such impacts,we carried out a field study on how ...The trend of fencing grassland as livestock paddocks is spreading on the Eurasian steppe,however,its impacts on grassland wildlife are little known.In order to explore such impacts,we carried out a field study on how grassland fencing impacts Przewalski's gazelle(Procapra przewalskii),a species listed as EN(Endangered) by SSC/IUCN,on the Qinghai-Tibet Plateau.The results revealed that(1) in the fenced areas,daily movement distance of Przewalski's gazelle was 5081±1187 m(Hudong-Ketu) and 4110±912 m(Yuanzhe),which was much shorter than the 7223±546 m recorded in an unfenced area(Kuaierma);(2) the feeding bout duration of Przewalski's gazelle was much shorter in the fenced habitat;(3) the frequency of walking along both high or low fence lines reached about 81%;while the frequency of jumping across the low fence line was only about 1.2% and frequency of crawling through the bottom of the high fence lines was about 17.8%;(4) the size of post-fencing habitat decreased to about 20% and 6% of the sizes of pre-fencing habitat in Hudong-Ketu and Yuanzhe areas respectively,but no clear change in the size of habitat area was found in the unfenced Kuaierma area;and(5) the fence lines impaired the possibility of gazelles to escape from predators and occasionally trapped the Przewalski's gazelle which failed to jump over the fence lines.Death occurrence of Przewalski's gazelle in the intensively fenced area,including gazelles strangled by fence lines and predated by wolves,reached 5% of the population size in Yuanzhe and up to 15%-20% in Hudong-Ketu.This study highlights the negative impacts of grassland fencing on Przewalski's gazelle and proposes measures for integrating conservation of this gazelle with livestock management practice.展开更多
Objective The purpose of this study was to investigate the differential expression of circRNAs in human blood,as a diagnostic marker for pre-diabetes and type 2 diabetes mellitus(T2DM).Methods Microarray analysis was ...Objective The purpose of this study was to investigate the differential expression of circRNAs in human blood,as a diagnostic marker for pre-diabetes and type 2 diabetes mellitus(T2DM).Methods Microarray analysis was used to select several differentially expressed circRNAs from three normal patients and three T2DM patients.Enlargement of the sample size(normal controls,n=20;subjects with impaired glucose regulation,n=20;and type 2 diabetes mellitus,n=20)determined circRNA to be the most evident differentially expressed by fluorescence quantitative PCR(Q-PCR).Then they were verified with expanded samples(normal controls,n=50;impaired glucose regulations,n=50;type 2 diabetes mellitus,n=50)by Q-PCR.Results A total of 2953 differentially expressed circRNAs were found in microarray analysis,of which 1439 were up-regulated and 1514 were down-regulated.Nine differentially expressed circRNAs were selected from the 1439 circRNAs that were up-regulated(hsacirc-103838,hsa-circ-103965,hsa-circ-104227,hsacirc-002117,hsa-circ-000094,hsa-circ-101226,hsacirc-101720,hsa-circ-400029,and hsa-circ-100633).The Q-PCR results of the expanded sample(n=60)showed that the difference expression of hsa-circ-000094(Alias:has-circ-0000247)in the nine circRNAs was the most obvious one among the 3 groups,the area under the maximum curve was found by ROC curve analysis,SIGR=0.8025[95%confidence interval(0.6655-0.9395),P=0.001];ST2DM=0.77[95%confidence interval(0.624-0.916),P=0.003].In order to verify the clinical diagnostic ability of hsa-circ-000094,the experiment was conducted to further expand the sample(n=150).The results showed that the expression of hsa-circ-000094 in the three groups was different,the difference and ROC curve analysis were statistically significant,SIGR=0.6733[95%confidence interval(0.5757-0.7710),P<0.01];ST2DM=0.7231[95%confidence interval(0.6327-0.8134),P<0.01].Conclusion The higher expression of hsa-circ-000094 in peripheral blood provides a certain diagnostic basis for pre-diabetes as well as type 2 diabetes mellitus.展开更多
The severe shortfall in testing supplies during the initial COVID-19 outbreak and ensuing struggle to manage the pandemic have affirmed the critical importance of optimal supplyconstrained resource allocation strategi...The severe shortfall in testing supplies during the initial COVID-19 outbreak and ensuing struggle to manage the pandemic have affirmed the critical importance of optimal supplyconstrained resource allocation strategies for controlling novel disease epidemics.To address the challenge of constrained resource optimization for managing diseases with complications like pre-and asymptomatic transmission,we develop an integro partial differential equation compartmental disease model which incorporates realistic latent,incubation,and infectious period distributions along with limited testing supplies for identifying and quarantining infected individuals.Our model overcomes the limitations of typical ordinary differential equation compartmental models by decoupling symptom status from model compartments to allow a more realistic representation of symptom onset and presymptomatic transmission.To analyze the influence of these realistic features on disease controllability,we find optimal strategies for reducing total infection sizes that allocate limited testing resources between‘clinical’testing,which targets symptomatic individuals,and‘non-clinical’testing,which targets non-symptomatic individuals.We apply our model not only to the original,delta,and omicron COVID-19 variants,but also to generically parameterized disease systems with varying mismatches between latent and incubation period distributions,which permit varying degrees of presymptomatic transmission or symptom onset before infectiousness.We find that factors that decrease controllability generally call for reduced levels of non-clinical testing in optimal strategies,while the relationship between incubation-latent mismatch,controllability,and optimal strategies is complicated.In particular,though greater degrees of presymptomatic transmission reduce disease controllability,they may increase or decrease the role of nonclinical testing in optimal strategies depending on other disease factors like transmissibility and latent period length.Importantly,our model allows a spectrum of diseases to be compared within a consistent framework such that lessons learned from COVID-19 can be transferred to resource constrained scenarios in future emerging epidemics and analyzed for optimality.展开更多
基金The project BACULOGENES of the European Union (LSHB-CT-2006-037541)The Netherlands Scientific Organisation (NWO) MEERVOUD program
文摘The Autographa californica multiple capsid nucleopolyhedrovirus (AcMNPV) was the first baculovirus for which the complete nucleotide sequence became known. Since then 15 years lapsed and much research has been performed to elucidate putative functions of the annotated open reading frames of this virus and this endeavour is still ongoing. AcMNPV is the most well-known and well-studied baculovirus species, not in the least for its application as a vector for the high-level expression of foreign genes in insect cells. This article is the first monograph of a single baculovirus and gives a current overview of what is known about the 151 AcMNPV ORFs, including (putative) function and temporal and spatial presence of transcripts and protein. To date 60 ORFs have a proven function, another 19 ORFs have homologs for which functions are known in other baculoviruses and 72 ORFs are still enigmatic. This paper should assist the reader in quickly finding the essentials of AcMNPV.
文摘The decolorization of Direct Black 22 by Aspergillus ficuum has been studied. It was found that Aspergillus ficuum could effectively decolorize Direct Black 22 especially when grown as pelleted mycelia. Results showed that the media containing Direct Black 22 at 50 mg/L could be decolorized by 98.05% of the initial color in 24 h. The optimum pH and temperature of decolorization are 4.0 and 33 °C respectively. Aeration was quite beneficial to decolorization. Medium composition and the concentration of Direct Black 22 could affect the rate of decolorization. The dye degraded products assayed by UV-visible spectrophotometer and macroscopic observation showed that the decolorization of Direct Black 22 by mycelial pellets includes two important processes: bioadsorption and biodegradation. The degradation experiment agree with the Michaelis-Menten kinetics equation.
文摘A pot experiment was conducted to study the effect of mycorrhiza, fungicides in difference concentration and there combination on growth and nutrients balance index of soya bean. Tow AM treatments including with and with out mycorrhiza and tow fungicides (parasmid and ant-arcol) each of them including four concentration (0.0, 0.25, 0.5 and 1 Kg·donum-1) were tested in factorial completely randomized design in the three replication. The results indicates that the higher value of total dry matter weight was recorded from combination treatment (F1M1C1) which attained 11.09 gm·pot-1 ,while the lower value 2.25 gm·pot-1 was produced by combination treatment (F2M2C3) ,however the same combination treatments was showed that the nitrogen ,phosphorus ,magnesium and iron in the shoot tissues in the mycorrhizal plant with lower concentration of fungicides were significantly greater (P -1, 251.00 mg·K-1) was recorded. The result of nutrient index and nutrient balance index revealed that the lower NBI (56.18) was recorded in combination treatments (F1M1C1), while the higher NBI (2033.81) was produced from combination treatments (F2M2C3), moreover the results shows significant negative correlation ship between NBI and total dry matter weight (r = -0.63*) .
文摘In this work, sequential optimization strategy, based on statistical designs, was employed to enhance the production of α-amylase by Aspergillus niger ATCC 16404. This statistical study consists of optimizing the factors that influence the production of α-amylase of A. niger ATCC 16404. Indeed, another statistical study has allowed the selection of 5 factors (pH, starch, yeast extract, “corn steep liquor”, CaCl<sub>2</sub> and salts) affecting both the development of mould (biomass) and that of the enzyme production. The central composite design allows the determination of the optimum of these selected factors and a quadratic model explains the factor reaction. Thus, the “ridge analysis” method, has led to maximizing the experimental reaction. The results indicate that the production rate of α-amylase is maximized in the presence of starch at 8.97 g/l, yeast extract at 2.86 g/l, CaCl<sub>2</sub> at 1.224 g/l, salts (composed of 25% FeSO<sub>4</sub>, 7H<sub>2</sub>O, 25% MnSO<sub>4</sub> and 50% MgCl<sub>2</sub>, 6H<sub>2</sub>O): FeSO<sub>4</sub>, 7H<sub>2</sub>O, MnSO<sub>4</sub> 0.1518 g/l and MgCl<sub>2</sub>, 6H<sub>2</sub>O at 0.3036 g/l. As for the pH, it is maintained at the rate of 5.68.
文摘Many hematopoietic malignancies have oncogenic gene fusions, like BCR-ABL, in their tumor-initiating cells. This implicates the product of the fusion as a powerful cancer-initiating event. In human prostate cancers, despite the detection of numerous similar fusions,
文摘Three related patients from Colombia presented with a juvenileonset neuronal c eroid lipofuscinosis. Electron microscopy of one case showed condensed fingerpri nt profiles, and genetic analyses identified a novel missense mutation in CLN5. The authors demonstrate the existence of pathogenic CLN5 mutations outside north ern Europe and that mutations in this gene can lead to an atypical late-onset n euronal ceroid lipofuscinosis disease, in addition to the late infantile form fi rst described inFinland.
基金supported by the National Natural Science Foundation of China (31070469 and 31070348)the Key Program of Knowledge Innovation Program of Chinese Academy of Sciences (KSCX2-EW-Z-4)+1 种基金the Science and Technology Supporting Project of MOST (2008BAC39B04)the Whitley Foundation for Nature
文摘The trend of fencing grassland as livestock paddocks is spreading on the Eurasian steppe,however,its impacts on grassland wildlife are little known.In order to explore such impacts,we carried out a field study on how grassland fencing impacts Przewalski's gazelle(Procapra przewalskii),a species listed as EN(Endangered) by SSC/IUCN,on the Qinghai-Tibet Plateau.The results revealed that(1) in the fenced areas,daily movement distance of Przewalski's gazelle was 5081±1187 m(Hudong-Ketu) and 4110±912 m(Yuanzhe),which was much shorter than the 7223±546 m recorded in an unfenced area(Kuaierma);(2) the feeding bout duration of Przewalski's gazelle was much shorter in the fenced habitat;(3) the frequency of walking along both high or low fence lines reached about 81%;while the frequency of jumping across the low fence line was only about 1.2% and frequency of crawling through the bottom of the high fence lines was about 17.8%;(4) the size of post-fencing habitat decreased to about 20% and 6% of the sizes of pre-fencing habitat in Hudong-Ketu and Yuanzhe areas respectively,but no clear change in the size of habitat area was found in the unfenced Kuaierma area;and(5) the fence lines impaired the possibility of gazelles to escape from predators and occasionally trapped the Przewalski's gazelle which failed to jump over the fence lines.Death occurrence of Przewalski's gazelle in the intensively fenced area,including gazelles strangled by fence lines and predated by wolves,reached 5% of the population size in Yuanzhe and up to 15%-20% in Hudong-Ketu.This study highlights the negative impacts of grassland fencing on Przewalski's gazelle and proposes measures for integrating conservation of this gazelle with livestock management practice.
文摘Objective The purpose of this study was to investigate the differential expression of circRNAs in human blood,as a diagnostic marker for pre-diabetes and type 2 diabetes mellitus(T2DM).Methods Microarray analysis was used to select several differentially expressed circRNAs from three normal patients and three T2DM patients.Enlargement of the sample size(normal controls,n=20;subjects with impaired glucose regulation,n=20;and type 2 diabetes mellitus,n=20)determined circRNA to be the most evident differentially expressed by fluorescence quantitative PCR(Q-PCR).Then they were verified with expanded samples(normal controls,n=50;impaired glucose regulations,n=50;type 2 diabetes mellitus,n=50)by Q-PCR.Results A total of 2953 differentially expressed circRNAs were found in microarray analysis,of which 1439 were up-regulated and 1514 were down-regulated.Nine differentially expressed circRNAs were selected from the 1439 circRNAs that were up-regulated(hsacirc-103838,hsa-circ-103965,hsa-circ-104227,hsacirc-002117,hsa-circ-000094,hsa-circ-101226,hsacirc-101720,hsa-circ-400029,and hsa-circ-100633).The Q-PCR results of the expanded sample(n=60)showed that the difference expression of hsa-circ-000094(Alias:has-circ-0000247)in the nine circRNAs was the most obvious one among the 3 groups,the area under the maximum curve was found by ROC curve analysis,SIGR=0.8025[95%confidence interval(0.6655-0.9395),P=0.001];ST2DM=0.77[95%confidence interval(0.624-0.916),P=0.003].In order to verify the clinical diagnostic ability of hsa-circ-000094,the experiment was conducted to further expand the sample(n=150).The results showed that the expression of hsa-circ-000094 in the three groups was different,the difference and ROC curve analysis were statistically significant,SIGR=0.6733[95%confidence interval(0.5757-0.7710),P<0.01];ST2DM=0.7231[95%confidence interval(0.6327-0.8134),P<0.01].Conclusion The higher expression of hsa-circ-000094 in peripheral blood provides a certain diagnostic basis for pre-diabetes as well as type 2 diabetes mellitus.
基金funded by the Center of Advanced Systems Understanding(CASUS)which is financed by Germany's Federal Ministry of Education and Research(BMBF)by the Saxon Ministry for Science,Culture and Tourism(SMWK)with tax funds on the basis of the budget approved by the Saxon State Parliament.
文摘The severe shortfall in testing supplies during the initial COVID-19 outbreak and ensuing struggle to manage the pandemic have affirmed the critical importance of optimal supplyconstrained resource allocation strategies for controlling novel disease epidemics.To address the challenge of constrained resource optimization for managing diseases with complications like pre-and asymptomatic transmission,we develop an integro partial differential equation compartmental disease model which incorporates realistic latent,incubation,and infectious period distributions along with limited testing supplies for identifying and quarantining infected individuals.Our model overcomes the limitations of typical ordinary differential equation compartmental models by decoupling symptom status from model compartments to allow a more realistic representation of symptom onset and presymptomatic transmission.To analyze the influence of these realistic features on disease controllability,we find optimal strategies for reducing total infection sizes that allocate limited testing resources between‘clinical’testing,which targets symptomatic individuals,and‘non-clinical’testing,which targets non-symptomatic individuals.We apply our model not only to the original,delta,and omicron COVID-19 variants,but also to generically parameterized disease systems with varying mismatches between latent and incubation period distributions,which permit varying degrees of presymptomatic transmission or symptom onset before infectiousness.We find that factors that decrease controllability generally call for reduced levels of non-clinical testing in optimal strategies,while the relationship between incubation-latent mismatch,controllability,and optimal strategies is complicated.In particular,though greater degrees of presymptomatic transmission reduce disease controllability,they may increase or decrease the role of nonclinical testing in optimal strategies depending on other disease factors like transmissibility and latent period length.Importantly,our model allows a spectrum of diseases to be compared within a consistent framework such that lessons learned from COVID-19 can be transferred to resource constrained scenarios in future emerging epidemics and analyzed for optimality.