In many applications and domains,temporal constraints between actions, and their probabilities play an important role. We propose the first approach in the literature coping with probabilistic quantitative constraints...In many applications and domains,temporal constraints between actions, and their probabilities play an important role. We propose the first approach in the literature coping with probabilistic quantitative constraints. To achieve such a challenging goal, we extend the widely used simple temporal problem(STP) framework to consider probabilities.Specifically,we propose i) a formal representation of probabilistic quantitative constraints, ii) an algorithm,based on the operations of intersection and composition,for the propagation of such temporal constraints, and iii) facilities to support query answering on a set of such constraints. As a result, we provide users with the first homogeneous method supporting the treatment(representing,reasoning,and querying) of probabilistic quantitative constraints, as required by many applications and domains.展开更多
Polyploidy is characterized by the presence of two or more complete sets of chromosomes coming from intraspecies whole-genome duplication(i.e.,autopolyploidy)or from hybridization between distinct but related species(...Polyploidy is characterized by the presence of two or more complete sets of chromosomes coming from intraspecies whole-genome duplication(i.e.,autopolyploidy)or from hybridization between distinct but related species(i.e.,allopolyploidy).Poly-ploidization is a driving force in the evolution of higher plants,most of the plant species have experienced ancient or recent genome duplication events that have led to several genome modifications,such as chromosomal reorganization,gene conversion,sub-genome dominance,alteration of gene expression patterns,and expansion/contraction of some gene families.展开更多
This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomyc...This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.展开更多
Honey is widely used for treating burns, ulcers and wounds, but the mechanisms of action are poorly known and the product is mainlyused as an antimicrobial. We have examined here the wound healing properties of honey ...Honey is widely used for treating burns, ulcers and wounds, but the mechanisms of action are poorly known and the product is mainlyused as an antimicrobial. We have examined here the wound healing properties of honey on human fi broblasts, using an in vitroscratch wound healing model. Three kinds of widely used monofl oral honeys were used, viz. acacia (Robinia pseudacacia), buckwheat(Fagopyrum sp.), and manuka (Leptospermum scoparium). Data displayed an increased wound healing activity in fi broblasts, butwith diff erent effi ciency and mechanisms of action among honeys. The eff ects of acacia and buckwheat emerged in both scratchwound and chemotaxis assays, while the eff ect of manuka was signifi cant but lower. The use of inhibitors indicated on the wholean essential role of cytosolic calcium, an important role of ERK and p38, and a secondary role of PI3K. Acacia and buckwheat,but not manuka, induced signifi cant increases in the release of interleukin-4 (IL-4), IL-6, and IL-8, indicating a correlation betweeninterleukin upregulation and wound closure effi ciency. This is consistent with our previous fi ndings suggesting a higher ability ofacacia and buckwheat to activate keratinocyte reepithelialization, with respect to manuka honey. In conclusion, our data indicatethat acacia and buckwheat honeys are particularly effi cient in facilitating fi broblast wound closure activities, suggesting newtherapeutic possibilities for this natural product.展开更多
Propolis is a resin produced by honeybees by mixing wax,pollen,salivary secretions,and collected natural resins.The precise composition of propolis varies with the source,and over 300 chemical components belonging to ...Propolis is a resin produced by honeybees by mixing wax,pollen,salivary secretions,and collected natural resins.The precise composition of propolis varies with the source,and over 300 chemical components belonging to the flavonoids,terpenes,and phenolic acids have been identified in propolis.Moreover,its chemical composition is subjected to the geographical location,botanical origin,and bee species.Propolis and its compounds have been the focus of many works due to their antimicrobial and anti-inflammatory activity;however,it is now recognized that propolis also possesses regenerative properties.There is an increasing interest in the healing potential of natural products,considering the availability and low cost of these products.Propolis contains a huge number of compounds that explicate some biological effects that speeds up the healing process and is widely used in folk remedies.This review aims to condense the results on the mechanism of activity of propolis and its compounds.展开更多
基金partially supported by Istituto Nazionale diAlta Matematica(INdAM)
文摘In many applications and domains,temporal constraints between actions, and their probabilities play an important role. We propose the first approach in the literature coping with probabilistic quantitative constraints. To achieve such a challenging goal, we extend the widely used simple temporal problem(STP) framework to consider probabilities.Specifically,we propose i) a formal representation of probabilistic quantitative constraints, ii) an algorithm,based on the operations of intersection and composition,for the propagation of such temporal constraints, and iii) facilities to support query answering on a set of such constraints. As a result, we provide users with the first homogeneous method supporting the treatment(representing,reasoning,and querying) of probabilistic quantitative constraints, as required by many applications and domains.
文摘Polyploidy is characterized by the presence of two or more complete sets of chromosomes coming from intraspecies whole-genome duplication(i.e.,autopolyploidy)or from hybridization between distinct but related species(i.e.,allopolyploidy).Poly-ploidization is a driving force in the evolution of higher plants,most of the plant species have experienced ancient or recent genome duplication events that have led to several genome modifications,such as chromosomal reorganization,gene conversion,sub-genome dominance,alteration of gene expression patterns,and expansion/contraction of some gene families.
基金The authors extend their appreciation to the International Scientific Partnership Program ISPP at King Saud University for funding this research work through ISPP#0089.Kevin D.Hyde would like to thank the Molecular Biology Experimental Center for the help on molecular work,the Mushroom Research Foundation(MRF),Chiang Rai,Thailand,the Thailand Research Fund grant no RSA5980068 entitled Biodiversity,Phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans,the Chinese Academy of Sciences,Project Number 2013T2S0030for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany and Mae Fah Luang University for a grants“Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae”(Grant number:592010200112)+11 种基金“Diseases of mangrove trees and maintenance of good forestry practice”(Grant number:60201000201 for supporting this study.K.D.Hyde is an Adjunct Professor at Chiang Mai University.Financial support by the German Academic Exchange Service(DAAD)and the Thai Royal Golden Ph.D.Jubilee-Industry program(RGJ)for a joint TRF-DAAD PPP(2012-2014)academic exchange grant to Kevin D.Hyde and Marc Stadler,and the RGJ for a personal grant to Benjarong Thongbai(No.Ph.D/0138/2553 in 4.S.MF/53/A.3)is gratefully acknowledged.Satinee Suetrong thanks to Apilux Loilong for collecting samples.This work was supported by the TRF/BIOTEC program for Biodiversity Research and Training Grant BRT R_352112,R_249001,R_251006.For their continued interest and support we also thank BIOTEC,Prof.Morakot Tanticharoen,Dr.Kanyawim Kirtikara and Dr.Lily Eurwilaichitr.Rungtiwa Phookamsak expresses appreciation to The CAS President’s International Fellowship for Postdoctoral Researchers,project number 2017PB0072the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)and Chiang Mai University for financial supportWe would like to thank DrsRobert Lucking,AndreAptroot and Cecile Gueidan for available suggestion.Saranyaphat Boonmee would like to thank the National Research Council of Thailand(no.2560A30702021)the Thailand Research Fund(Project No.TRG5880152)Chayanard Phukhamsakda would like to thank Royal Golden Jubilee Ph.D.Program under Thailand Research Fund,for the award of a scholarship no.PHD/0020/2557.Ausana Mapook is grateful to Research and Researchers for Industries(RRI)PHD57I0012.Ting-Chi Wen and Yuan-Pin Xiao are grateful to The National Natural Science Foundation of China(Nos.31460012 and 3161113034)Samantha C.Karunarathna thanks Yunnan Provincial Department of Human Resources and Social Security funded postdoctoral project(Number 179122)for supporting his postdoctoral research study.Ivana Kusan and Zdenko Tkalcec have been partially supported by Croatian Science Foundation under the project HRZZIP-11-2013-2202(ACCTA)We would also like to thank Roman Ozimec and Najla Bakovicfor collecting the samples and partially Oikon Ltd.for financing the fieldwork.We would like to thank Dr.Shaun Pennycook for checking most of the Latin names.Qing Tian and Putarak Chomnunti extend their sincere thanks to the National Research Council of Thailand(grant for Dothideomycetes No.2560A30702014)Putarak Chomnunti would like to thanks for Thailand Research Fund grant no.MRG6080089Dr.Rajesh Jeewon is grateful to University of Mauritius and Mae Fah Luang University for research support.Olinto L.Pereira thank the CAPES,CNPq and FAPEMIG for financial support and ICMBio/FLONA-Paraopeba for providing facilities and permits for the exploration surveys of the mycodiversity in their protected areas.Young Woon Lim and Hyun Lee are grateful to the National Institute of Biological Resources(NIBR 20171104)Republic of Korea.The study was partially supported by the National Science Centre,Poland under grant No.2015/17/D/NZ8/00778 to Julia Pawłowska and UMO-2016/23/B/NZ8/00897 to Marta Wrzosek.Anna Bazzicalupo,Bart Buyck,Daniel Miller and Mary L.Berbee thank WTU and the Burke Museum for scanned images of Benjamin Woo’s datasheets and photographs of Russula specimens and for the loan of Woo’s specimens.Mary L.Berbee acknowledges support by Discovery Grant RGPIN-2016-03746National Science and Engineering Research Council of Canada.Anna Bazzicalupo acknowledges the student grants for field work and study abroad from the NSERC CREATE Training Program in Biodiversity Research,Sonoma County Mycological Association Student Grant,and Daniel E.Stuntz Memorial Foundation Individual Grant.The Key Research Program of Frontier Sciences of the Chinese Academy of Sciences(grant number QYZDY-SSW-SMC014)is also thanked for support.
文摘This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.
基金Yamada Bee Farm Grant forHoneybee Research (2010).Yamada Bee Farm Grant for Honeybee Research
文摘Honey is widely used for treating burns, ulcers and wounds, but the mechanisms of action are poorly known and the product is mainlyused as an antimicrobial. We have examined here the wound healing properties of honey on human fi broblasts, using an in vitroscratch wound healing model. Three kinds of widely used monofl oral honeys were used, viz. acacia (Robinia pseudacacia), buckwheat(Fagopyrum sp.), and manuka (Leptospermum scoparium). Data displayed an increased wound healing activity in fi broblasts, butwith diff erent effi ciency and mechanisms of action among honeys. The eff ects of acacia and buckwheat emerged in both scratchwound and chemotaxis assays, while the eff ect of manuka was signifi cant but lower. The use of inhibitors indicated on the wholean essential role of cytosolic calcium, an important role of ERK and p38, and a secondary role of PI3K. Acacia and buckwheat,but not manuka, induced signifi cant increases in the release of interleukin-4 (IL-4), IL-6, and IL-8, indicating a correlation betweeninterleukin upregulation and wound closure effi ciency. This is consistent with our previous fi ndings suggesting a higher ability ofacacia and buckwheat to activate keratinocyte reepithelialization, with respect to manuka honey. In conclusion, our data indicatethat acacia and buckwheat honeys are particularly effi cient in facilitating fi broblast wound closure activities, suggesting newtherapeutic possibilities for this natural product.
文摘Propolis is a resin produced by honeybees by mixing wax,pollen,salivary secretions,and collected natural resins.The precise composition of propolis varies with the source,and over 300 chemical components belonging to the flavonoids,terpenes,and phenolic acids have been identified in propolis.Moreover,its chemical composition is subjected to the geographical location,botanical origin,and bee species.Propolis and its compounds have been the focus of many works due to their antimicrobial and anti-inflammatory activity;however,it is now recognized that propolis also possesses regenerative properties.There is an increasing interest in the healing potential of natural products,considering the availability and low cost of these products.Propolis contains a huge number of compounds that explicate some biological effects that speeds up the healing process and is widely used in folk remedies.This review aims to condense the results on the mechanism of activity of propolis and its compounds.