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Research of Panax spp.in Kunming Institute of Botany,CAS 被引量:5
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作者 Yi-Jun Qiao Jia-Huan Shang +3 位作者 Dong Wang Hong-Tao Zhu Chong-Ren Yang Ying-Jun Zhang 《Natural Products and Bioprospecting》 CAS 2018年第4期245-263,共19页
Panax,a genus of the Araliaceae family,is an important herbal group in traditional Chinese medicine(TCM).Nine species and three varieties are included in the genus of Panax,in which nearly all species have been used f... Panax,a genus of the Araliaceae family,is an important herbal group in traditional Chinese medicine(TCM).Nine species and three varieties are included in the genus of Panax,in which nearly all species have been used for medicinal purposes.Among them,Panax notoginseng(Burk)F.H.Chen,Panax ginseng C.A.Meyer and Panax quinquefolius L.are the most representative and valuable herbs world-wide,with a long history of cultivation.As the main bioactive chemical constituents,saponins with different aglycones are the major components in various Panax spp.,and their pharmacological activities are mainly reflected in the effects on blood system,cardio-and cerebro-vascular systems,nervous system,metabolism,and immune regulation.Researchers of Kunming Institute of Botany(KIB),Chinese Academy of Sciences(CAS),have put many efforts into conducting the investigations on Panax species.Herein,we reviewed the research progress on Panax spp.in KIB,CAS,over the past few decades,from the aspects of history and origin,phytochemistry and pharmacological activities. 展开更多
关键词 Panax spp. PHYTOCHEMISTRY Pharmacological activities SAPONINS
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Taxonomy in the Kunming Institute of Botany(KIB): Progress during the past decade(2008-2018) and perspectives on future development 被引量:2
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作者 Xiangqin Yu Chunlei Xiang Hua Peng 《Plant Diversity》 SCIE CAS CSCD 2018年第4期147-157,共11页
The development of new taxonomical theories and approaches, particularly molecular phylogenetics, has led to the expansion of traditional morphology-based taxonomy into the concept of "integrative taxonomy."... The development of new taxonomical theories and approaches, particularly molecular phylogenetics, has led to the expansion of traditional morphology-based taxonomy into the concept of "integrative taxonomy." Taxonomic knowledge has assumed greater significance in recent years, particularly because of growing concerns over the looming biodiversity crisis. Since its establishment in 1938, the Kunming Institute of Botany(KIB), which is located in Yunnan province in Southwest China, has focused attention on the taxonomy and conservation of the flora of China. For the forthcoming 80 th anniversary of KIB, we review the achievements of researchers at KIB and their associates with respect to the taxonomy of land plants, fungi, and lichen. Major taxonomic advances are summarized for families of Calymperaceae,Cryphaeaceae, Lembophyllaceae, Neckeraceae, Polytrichaceae and Pottiaceae of mosses, Pteridaceae and Polypodiaceae of ferns, Taxaceae and Cycadaceae of gymnosperms, Asteraceae, Begoniaceae, Ericaceae,Euphorbiaceae, Gesneriaceae, Lamiaceae, Orchidaceae, Orobanchaceae, Poaceae, Theaceae and Urticaceae of angiosperms, Agaricaceae, Amanitaceae, Boletaceae, Cantharellaceae, Physalacriaceae Russulaceae, Suillaceae and Tuberaceae of fungi, and Ophioparmaceae and Parmeliaceae of lichens. Regarding the future development of taxonomy at KIB, we recommend that taxonomists continue to explore the biodiversity of China, integrate new theories and technologies with traditional taxonomic approaches,and engage in creative monographic work, with support from institutions, funding agencies, and the public. 展开更多
关键词 TAXONOMY Molecular phylogeny Land plants FUNGI LICHEN
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Affiliation with Natural Products at KIB of Prof.Zhou Jun:On the Occasion of 80th Anniversary of Kunming Institute of Botany,CAS 被引量:1
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作者 Jiang-Miao Hu 《Natural Products and Bioprospecting》 CAS 2018年第4期199-206,共8页
Prof.Zhou Jun,Academician of Chinese Academy of Sciences(1999),is a phytochemist and medicinal chemist of China.He is one of the pioneers of Kunming Institute of Botany,CAS and a major founder of the State Key Laborat... Prof.Zhou Jun,Academician of Chinese Academy of Sciences(1999),is a phytochemist and medicinal chemist of China.He is one of the pioneers of Kunming Institute of Botany,CAS and a major founder of the State Key Laboratory of Phytochemistry and Plant Resources in West China.The chemical compositions of some TCM from genus of Dioscorea,Aconitum,Panax,Paris,Cynanchum,Gastrodia,Dendrobium etc.and family Asclepiadaceae,Caryophyllaceae,Hypoxidaceae etc.have been explored by Prof.Zhou's team as steroids,triterpenoids,alkaloids,cyclic peptides and phenols etc.,which revealed the main active composition of those TCM such as Panax notoginseng,Paris yunnanensis and Gastrodia elata. 展开更多
关键词 Prof.Zhou Jun Plant resources PANAX Paris Gastrodia CYNANCHUM
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Historical biogeography and evolutionary diversification of Lilium(Liliaceae): New insights from plastome phylogenomics 被引量:1
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作者 Nian Zhou Ke Miao +4 位作者 Changkun Liu Linbo Jia Jinjin Hu Yongjiang Huang Yunheng Ji 《Plant Diversity》 SCIE CAS CSCD 2024年第2期219-228,共10页
Here, we infer the historical biogeography and evolutionary diversification of the genus Lilium. For this purpose, we used the complete plastomes of 64 currently accepted species in the genus Lilium(14plastomes were n... Here, we infer the historical biogeography and evolutionary diversification of the genus Lilium. For this purpose, we used the complete plastomes of 64 currently accepted species in the genus Lilium(14plastomes were newly sequenced) to recover the phylogenetic backbone of the genus and a timecalibrated phylogenetic framework to estimate biogeographical history scenarios and evolutionary diversification rates of Lilium. Our results suggest that ancient climatic changes and geological tectonic activities jointly shaped the distribution range and drove evolutionary radiation of Lilium, including the Middle Miocene Climate Optimum(MMCO), the late Miocene global cooling, as well as the successive uplift of the Qinghai-Tibet Plateau(QTP) and the strengthening of the monsoon climate in East Asia during the late Miocene and the Pliocene. This case study suggests that the unique geological and climatic events in the Neogene of East Asia, in particular the uplift of QTP and the enhancement of monsoonal climate, may have played an essential role in formation of uneven distribution of plant diversity in the Northern Hemisphere. 展开更多
关键词 Asian monsoon Climatic changes Distribution range Evolutionary complexity Radiative diversification Species diversity Qinghai-Tibet Plateau(QTP)
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Sex-specific facilitation and reproduction of the gynodioecious cushion plant Arenaria polytrichoides on the Himalaya-Hengduan mountains,SW China 被引量:1
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作者 Xufang Chen Yazhou Zhang +3 位作者 Lishen Qian Renyu Zhou Hang Sun Jianguo Chen 《Plant Diversity》 SCIE CAS CSCD 2024年第2期247-255,共9页
When benefiting other beneficiaries,cushion plants may reciprocally receive feedback effects.The feedback effects on different sex morphs,however,remains unclear.In this study,taking the gynodioecious Arenaria polytri... When benefiting other beneficiaries,cushion plants may reciprocally receive feedback effects.The feedback effects on different sex morphs,however,remains unclear.In this study,taking the gynodioecious Arenaria polytrichiodes as a model species,we aimed to assess the sex-specific facilitation intensity of cushion plant by measuring the beneficiary cover ratio,and to assess the potential costs in cushion reproductive functions by measuring the flower and fruit cover ratios.The total beneficiary cover ratio was similar between females and hermaphrodites.Females produced much less flowers but more fruits than hermaphrodites.These results suggested that females and hermaphrodites possess similar facilitation intensity,and female cushion A.polytrichoides may allocate more resources saved from pollen production to seed production,while hermaphrodites possibly allocate more resources to pollen production hence reducing seed production.The surface areas covered by beneficiaries produced less flowers and fruits than areas without beneficiaries.In addition,strong negative correlations between beneficiary cover and flower cover were detected for both females and hermaphrodites,but the correlation strength were similar for these two sex morphs.However,the correlation between beneficiary cover and fruit cover was only significantly negative for females,suggesting that beneficiary plants negatively affect fruit reproduction of females while have neutral effects on hermaphrodites.All the results suggest that to facilitate other beneficiaries can induce reproductive costs on cushion A.polytrichoides,with females possibly suffering greater cost than hermaphrodites.Such differentiation in reproductive costs between sex morphs,in long-term perspective,may imply sex imbalance in population dynamics. 展开更多
关键词 Facilitation intensity Feedback effect Sex-specific facilitation Nurse plant Population dynamics Reproductive function
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Plastid phylogenomics provides new insights into the systematics,diversification,and biogeography of Cymbidium(Orchidaceae) 被引量:1
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作者 Hai-Yao Chen Zhi-Rong Zhang +7 位作者 Xin Yao Ji-Dong Ya Xiao-Hua Jin Lin Wang Lu Lu De-Zhu Li Jun-Bo Yang Wen-Bin Yu 《Plant Diversity》 SCIE CAS CSCD 2024年第4期448-461,共14页
Cymbidium(Orchidaceae:Epidendroideae),with around 60 species,is widely-distributed across Southeast Asia,providing a nice system for studying the processes that underlie patterns of biodiversity in the region.However,... Cymbidium(Orchidaceae:Epidendroideae),with around 60 species,is widely-distributed across Southeast Asia,providing a nice system for studying the processes that underlie patterns of biodiversity in the region.However,phylogenetic relationships of Cymbidium have not been well resolved,hampering investigations of species diversification and the biogeographical history of this genus.In this study,we construct a plastome phylogeny of 56 Cymbidium species,with four well-resolved major clades,which provides a framework for biogeographical and diversification rate analyses.Molecular dating and biogeographical analyses show that Cymbidium likely originated in the region spanning northern IndoBurma to the eastern Himalayas during the early Miocene(~21.10 Ma).It then rapidly diversified into four major clades in East Asia within approximately a million years during the middle Miocene.Cymbidium spp.migration to the adjacent regions(Borneo,Philippines,and Sulawesi)primarily occurred during the Pliocene-Pleistocene period.Our analyses indicate that the net diversification rate of Cymbidium has decreased since its origin,and is positively associated with changes in temperature and monsoon intensity.Favorable hydrothermal conditions brought by monsoon intensification in the early Miocene possibly contributed to the initial rapid diversification,after which the net diversification rate was reduced with the cooling climate after the middle Miocene.The transition from epiphytic to terrestrial habits may have enabled adaptation to cooler environments and colonization of northern niches,yet without a significant effect on diversification rates.This study provides new insights into how monsoon activity and temperature changes affected the diversification dynamics of plants in Southeast Asia. 展开更多
关键词 CYMBIDIUM East Asia Asian monsoons Climate change Biogeographical patterns
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Ecological problems and ecological restoration zoning of the Aral Sea 被引量:1
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作者 BAO Anming YU Tao +7 位作者 XU Wenqiang LEI Jiaqiang JIAPAER Guli CHEN Xi Tojibaev KOMILJON Shomurodov KHABIBULLO Xabibullaev B SAGIDULLAEVICH Idirisov KAMALATDIN 《Journal of Arid Land》 SCIE CSCD 2024年第3期315-330,共16页
The Aral Sea was the fourth largest lake in the world but it has shrunk dramatically as a result of irrational human activities, triggering the "Aral Sea ecological crisis". The ecological problems of the Ar... The Aral Sea was the fourth largest lake in the world but it has shrunk dramatically as a result of irrational human activities, triggering the "Aral Sea ecological crisis". The ecological problems of the Aral Sea have attracted widespread attention, and the alleviation of the Aral Sea ecological crisis has reached a consensus among the five Central Asian countries(Kazakhstan, Uzbekistan, Tajikistan, Kyrgyzstan, and Turkmenistan). In the past decades, many ecological management measures have been implemented for the ecological restoration of the Aral Sea. However, due to the lack of regional planning and zoning, the results are not ideal. In this study, we mapped the ecological zoning of the Aral Sea from the perspective of ecological restoration based on soil type, soil salinity, surface water, groundwater table, Normalized Difference Vegetation Index(NDVI), land cover, and aerosol optical depth(AOD) data. Soil salinization and salt dust are the most prominent ecological problems in the Aral Sea. We divided the Aral Sea into 7 first-level ecological restoration subregions(North Aral Sea catchment area in the downstream of the Syr Darya River(Subregion Ⅰ);artificial flood overflow area in the downstream of the Aral Sea(Subregion Ⅱ);physical/chemical remediation area of the salt dust source area in the eastern part of the South Aral Sea(Subregion Ⅲ);physical/chemical remediation area of severe salinization in the central part of the South Aral Sea(Subregion Ⅳ);existing water surface and potential restoration area of the South Aral Sea(Subregion Ⅴ);Aral Sea vegetation natural recovery area(Subregion Ⅵ);and vegetation planting area with slight salinization in the South Aral Sea(Subregion Ⅶ)) and 14 second-level ecological restoration subregions according to the ecological zoning principles. Implementable measures are proposed for each ecological restoration subregion. For Subregion Ⅰ and Subregion Ⅱ with lower elevations, artificial flooding should be carried out to restore the surface of the Aral Sea. Subregion Ⅲ and Subregion Ⅳ have severe salinization, making it difficult for vegetation to grow. In these subregions, it is recommended to cover and pave the areas with green biomatrix coverings and environmentally sustainable bonding materials. In Subregion Ⅴ located in the central and western parts of the South Aral Sea, surface water recharge should be increased to ensure that this subregion can maintain normal water levels. In Subregion Ⅵ and Subregion Ⅶ where natural conditions are suitable for vegetation growth, measures such as afforestation and buffer zones should be implemented to protect vegetation. This study could provide a reference basis for future comprehensive ecological management and restoration of the Aral Sea. 展开更多
关键词 ecological restoration zoning salt and dust storms soil salinization ecological crisis Aral Sea Central Asia
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Central Asia revealed as a key area in evolution of Eremurus (Asphodelaceae)
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作者 Dilmurod Makhmudjanov Sergei Volis +4 位作者 Ziyoviddin Yusupov Inom Juramurodov Komiljon Tojibaev Tao Deng Hang Sun 《Plant Diversity》 SCIE CAS CSCD 2024年第3期333-343,共11页
Eremurus was described at the beginning of the 19th century.However,due to limited sampling and the small number of gene markers to date,its phylogeny and evolution are largely unknown.In this study,we analyzed plasto... Eremurus was described at the beginning of the 19th century.However,due to limited sampling and the small number of gene markers to date,its phylogeny and evolution are largely unknown.In this study,we analyzed plastomes from 27 species belonging to 2 subgenera and 3 sections of Eremurus,which are found in Central Asia(its center of diversity)and China.We also analyzed nuclear DNA ITS of 33 species,encompassing all subgenera and sections of the genus in Central Asia,southwest Asia and China.Our findings revealed that the genus was monophyletic,although both subgenera Eremurus and Henningia were found to be paraphyletic.Both plastome and nrDNA-based phylogenetic trees had three clades that did not reflect the current taxonomy of the genus.Our biogeographical and time-calibrated trees suggest that Eremurus originated in the ancient Tethyan area in the second half of the Eocene.Diversification of Eremurus occurred from the early Oligocene to the late Miocene.Paratethys Sea retreat and several orogenetic events,such as the progressive uplift of the Qinghai-Tibet Plateau and surrounding mountain belts(Altai,Pamir,Tian Shan),caused serious topographic and climate(aridification)changes in Central Asia that may have triggered a split of clades and speciation.In this transformed Central Asia,speciation proceeded rapidly driven mainly by vicariance caused by numerous mountain chains and specialization to a variety of climatic,topographic and soil conditions that exist in this region. 展开更多
关键词 ASPHODELACEAE Asphodeloideae PLASTOME Central Asia Qinghai-Tibet Plateau
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Deep genome skimming reveals the hybrid origin of Pseudosasa gracilis (Poaceae: Bambusoideae)
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作者 Xiang-Zhou Hu Cen Guo +2 位作者 Sheng-Yuan Qin De-Zhu Li Zhen-Hua Guo 《Plant Diversity》 SCIE CAS CSCD 2024年第3期344-352,共9页
Pseudosasa gracilis(Poaceae:Bambusoideae)is a temperate woody bamboo species endemic to Southcentral China with a narrow distribution.Previous phylogenetic studies revealed an unexpected,isolated phylogenetic position... Pseudosasa gracilis(Poaceae:Bambusoideae)is a temperate woody bamboo species endemic to Southcentral China with a narrow distribution.Previous phylogenetic studies revealed an unexpected,isolated phylogenetic position of Ps.gracilis.Here we conducted phylogenomic analysis by sampling populations of Ps.gracilis and its sympatric species Ps.nanunica and Sinosasa polytricha reflecting different genomic signals,by deep genome skimming.Integrating molecular evidence from chloroplast genes and genome-wide SNPs,we deciphered the phylogenetic relationships of Ps.gracilis.Both plastid and nuclear data indicate that Ps.gracilis is more closely related to Sinosasa,which is discordant with the taxonomic treatment.To further explore this molecular-morphological conflict,we screened 411“perfect-copy”syntenic genes to reconstruct phylogenies using both the concatenation and coalescent methods.We observed extensive discordance between gene trees and the putative species tree.A significant hybridization event was detected based on 411 genes from the D subgenome,showing Ps.gracilis was a hybrid descendant between Sinosasa longiligulata and Ps.nanunica,with 63.56%and 36.44%inheritance probabilities of each parent.Moreover,introgression events were detected in the C subgenome between Ps.gracilis and S.polytricha in the same distribution region.Our findings suggest that sympatric hybridization and introgression play a crucial role in the origin of Ps.gracilis.By providing an empirical example of bamboo of hybrid origin using comprehensive analyses based on genomic data from different inheritance systems and morphological characters,our study represents a step forward in understanding of reticulate evolution of bamboos. 展开更多
关键词 PHYLOGENOMICS Hybridization INTROGRESSION Pseudosasa gracilis Pseudosasa Sinosasa
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Reproductive height determines the loss of clonal grasses with nitrogen enrichment in a temperate grassland
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作者 Xu Chen Haining Lu +4 位作者 Zhengru Ren Yuqiu Zhang Ruoxuan Liu Yunhai Zhang Xingguo Han 《Plant Diversity》 SCIE CAS CSCD 2024年第2期256-264,共9页
Tall clonal grasses commonly display competitive advantages with nitrogen(N)enrichment.However,it is currently unknown whether the height is derived from the vegetative or reproductive module.Moreover,it is unclear wh... Tall clonal grasses commonly display competitive advantages with nitrogen(N)enrichment.However,it is currently unknown whether the height is derived from the vegetative or reproductive module.Moreover,it is unclear whether the height of the vegetative or reproductive system regulates the probability of extinction and colonization,and determines species diversity.In this study,the impacts on clonal grasses were studied in a field experiment employing two frequencies(twice a year vs.monthly)crossing with nine N addition rates in a temperate grassland,China.We found that the N addition decreased species frequency and increased extinction probability,but did not change the species colonization probability.A low frequency of N addition decreased species frequency and colonization probability,but increased extinction probability.Moreover,we found that species reproductive height was the best index to predict the extinction probability of clonal grasses in N-enriched conditions.The low frequency of N addition may overestimate the negative effect from N deposition on clonal grass diversity,suggesting that a higher frequency of N addition is more suitable in assessing the ecological effects of N deposition.Overall,this study illustrates that reproductive height was associated with the clonal species extinction probability under N-enriched environment. 展开更多
关键词 ANPP Biodiversity Clonal grass COLONIZATION EXTINCTION Nitrogen addition frequency
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Histological, physio-biochemical, and transcriptomic analyses reveal the potential limiting factors for successful grafting of pecan
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作者 Zhenghai Mo Xufeng Yang +2 位作者 Longjiao Hu Min Zhai Jiping Xuan 《Journal of Forestry Research》 SCIE EI CAS CSCD 2024年第6期317-327,共11页
Budding is an important grafting technique to asexually propagate pecan(Carya illinoinensis(Wangenh.)K.Koch).To determine factors that might hamper success-ful budding of the species,a representative easy-to-survive c... Budding is an important grafting technique to asexually propagate pecan(Carya illinoinensis(Wangenh.)K.Koch).To determine factors that might hamper success-ful budding of the species,a representative easy-to-survive cultivar‘Pawnee’and a typical difficult-to-survive culti-var‘Jinhua’were used for comprehensive analysis.Mor-phological observation showed that cells surrounding the secretory cells or sieve tube had collapsed in‘Jinhua’but not in‘Pawnee’during grafting.‘Jinhua’might suffer more hypoxia stress than‘Pawnee’as‘Jinhua’had higher catalase,superoxide dismutase,polyphenol oxidase,pyruvate decar-boxylase(PDC),alcohol dehydrogenase(ADH)activities during grafting and contained greater levels of hydrogen per-oxide 12 days after grafting(DAG).Transcriptions of PDC and ADH were also up-regulated significantly in‘Jinhua’whereas they were not significantly affected in‘Pawnee’.Phenylalanine ammonia-lyase activities of‘Jinhua’were consistently lower than that of‘Pawnee’.Initial phenol con-tents were similar between the two cultivars.Graft-promot-ing substances,including soluble sugar,soluble protein,and gibberellin(GA)were incompletely recovered in‘Jinhua’12 DAG while fully restored in‘Pawnee’.Increased levels of trans-zeatin riboside in‘Jinhua’were much smaller than in‘Pawnee’3 DAG.The contents of indole-3-acetic acid were similar,and the dynamics of abscisic acid were the same between the two genotypes.Results suggest that hypoxia stress and shortages of sugar,protein,GA,and cytokinin during the healing process might be key factors limiting successful budding of pecan.The degree of scion-rootstock compatibility and the content of phenols might be excluded as constraints for successful budding. 展开更多
关键词 PECAN GRAFTING HISTOLOGY BIOCHEMISTRY Transcriptome analysis
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Species’ geographical range, environmental range and traits lead to specimen collection preference of dominant plant species of grasslands in Northern China
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作者 Jingya Zhang Cui Xiao +5 位作者 Xiaoyu Duan Xin Gao Hao Zeng Rong'an Dong Gang Feng Keping Ma 《Plant Diversity》 SCIE CAS CSCD 2024年第3期353-361,共9页
Many different factors,such as species traits,socio-economic factors,geographical and environmental factors,can lead to specimen collection preference.This study aims to determine whether grassland specimen collection... Many different factors,such as species traits,socio-economic factors,geographical and environmental factors,can lead to specimen collection preference.This study aims to determine whether grassland specimen collection in China is preferred by species traits(i.e.,plant height,flowering and fruiting period),environmental range(i.e.,the temperature and precipitation range)and geographical range(i.e.,distribution range and altitudinal range).Ordinary least squares models and phylogenetic generalized linear mixed models were used to analyze the relationships between specimen number and the explanatory variables.Random Forest models were then used to find the most parsimonious multivariate model.The results showed that interannual variation in specimen number between 1900 and 2020 was considerable.Specimen number of these species in southeast China was notably lower than that in northwest China.Environmental range and geographical range of species had significant positive correlations with specimen number.In addition,there were relatively weak but significant associations between specimen number and species trait(i.e.,plant height and flowering and fruiting period).Random Forest models indicated that distribution range was the most important variable,followed by flowering and fruiting period,and altitudinal range.These findings suggest that future floristic surveys should pay more attention to species with small geographical range,narrow environmental range,short plant height,and short flowering and fruiting period.The correction of specimen collection preference will also make the results of species distribution model,species evolution and other works based on specimen data more accurate. 展开更多
关键词 Biological specimen Collection preference Dominant plant species Environmental range Geographical range Species traits
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RAD-seq data reveals robust phylogeny and morphological evolutionary history of Rhododendron
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作者 Yuanting Shen Gang Yao +6 位作者 Yunfei Li Xiaoling Tian Shiming Li Nian Wang Chengjun Zhang Fei Wang Yongpeng Ma 《Horticultural Plant Journal》 SCIE CAS CSCD 2024年第3期866-878,共13页
Rhododendron is famous for its high ornamental value.However,the genus is taxonomically difficult and the relationships within Rhododendron remain unresolved.In addition,the origin of key morphological characters with... Rhododendron is famous for its high ornamental value.However,the genus is taxonomically difficult and the relationships within Rhododendron remain unresolved.In addition,the origin of key morphological characters with high horticulture value need to be explored.Both problems largely hinder utilization of germplasm resources.Most studies attempted to disentangle the phylogeny of Rhododendron,but only used a few genomic markers and lacked large-scale sampling,resulting in low clade support and contradictory phylogenetic signals.Here,we used restriction-site associated DNA sequencing(RAD-seq)data and morphological traits for 144 species of Rhododendron,representing all subgenera and most sections and subsections of this species-rich genus,to decipher its intricate evolutionary history and reconstruct ancestral state.Our results revealed high resolutions at subgenera and section levels of Rhododendron based on RAD-seq data.Both optimal phylogenetic tree and split tree recovered five lineages among Rhododendron.Subg.Therorhodion(cladeⅠ)formed the basal lineage.Subg.Tsutsusi and Azaleastrum formed cladeⅡand had sister relationships.CladeⅢincluded all scaly rhododendron species.Subg.Pentanthera(cladeⅣ)formed a sister group to Subg.Hymenanthes(cladeⅤ).The results of ancestral state reconstruction showed that Rhododendron ancestor was a deciduous woody plant with terminal inflorescence,ten stamens,leaf blade without scales and broadly funnelform corolla with pink or purple color.This study shows significant distinguishability to resolve the evolutionary history of Rhododendron based on high clade support of phylogenetic tree constructed by RAD-seq data.It also provides an example to resolve discordant signals in phylogenetic trees and demonstrates the application feasibility of RAD-seq with large amounts of missing data in deciphering intricate evolutionary relationships.Additionally,the reconstructed ancestral state of six important characters provides insights into the innovation of key characters in Rhododendron. 展开更多
关键词 RHODODENDRON RAD-seq Missing data Quartet sampling(QS) Ancestral state reconstruction
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Genetic analyses of ancient tea trees provide insights into the breeding history and dissemination of Chinese Assam tea(Camellia sinensis var.assamica)
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作者 Miao-Miao Li Muditha K.Meegahakumbura +5 位作者 Moses C.Wambulwa Kevin S.Burgess Michael Möller Zong-Fang Shen De-Zhu Li Lian-Ming Gao 《Plant Diversity》 SCIE CAS CSCD 2024年第2期229-237,共9页
Chinese Assam tea(Camellia sinensis var.assamica)is an important tea crop with a long history of cultivation in Yunnan,China.Despite its potential value as a genetic resource,its genetic diversity and domestication/br... Chinese Assam tea(Camellia sinensis var.assamica)is an important tea crop with a long history of cultivation in Yunnan,China.Despite its potential value as a genetic resource,its genetic diversity and domestication/breeding history remain unclear.To address this issue,we genotyped 469 ancient tea plant trees representing 26 C.sinensis var.assamica populations,plus two of its wild relatives(six and three populations of C.taliensis and C.crassicolumna,respectively)using 16 nuclear microsatellite loci.Results showed that Chinese Assam tea has a relatively high,but comparatively lower gene diversity(H_(S)=0.638)than the wild relative C.crassicolumna(H_S=0.658).Clustering in STRUCTURE indicated that Chinese Assam tea and its two wild relatives formed distinct genetic groups,with considerable interspecific introgression.The Chinese Assam tea accessions clustered into three gene pools,corresponding well with their geographic distribution.However,New Hybrids analysis indicated that 68.48%of ancient Chinese Assam tea plants from Xishuangbanna were genetic intermediates between the Puer and Lincang gene pools.In addition,10%of the ancient Chinese Assam tea individuals were found to be hybrids between Chinese Assam tea and C.taliensis.Our results suggest that Chinese Assam tea was domesticated separately in three gene pools(Puer,Lincang and Xishuangbanna)in the Mekong River valley and that the hybrids were subsequently selected during the domestication process.Although the domestication history of Chinese Assam tea in southwestern Yunnan remains complex,our results will help to identify valuable genetic resources that may be useful in future tea breeding programs. 展开更多
关键词 Tea plant Hybrid origin Genetic diversity Domestication history Camellia sinensis var.assamica Camellia taliensis
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Progress in systematics and biogeography of Orchidaceae
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作者 Yajun Wang Hanchen Wang +4 位作者 Chao Ye Zhiping Wang Chongbo Ma Dongliang Lin Xiaohua Jin 《Plant Diversity》 SCIE CAS CSCD 2024年第4期425-434,共10页
Orchidaceae are one of the largest families of angiosperms in terms of species richness.In the last decade,numerous studies have delved into reconstructing the phylogenetic framework of Orchidaceae,leveraging data fro... Orchidaceae are one of the largest families of angiosperms in terms of species richness.In the last decade,numerous studies have delved into reconstructing the phylogenetic framework of Orchidaceae,leveraging data from plastid,mitochondrial and nuclear sources.These studies have provided new insights into the systematics,diversification and biogeography of Orchidaceae,establishing a robust foundation for future research.Nevertheless,pronounced controversies persist regarding the precise placement of certain lineages within these phylogenetic frameworks.To address these discrepancies and deepen our understanding of the phylogenetic structure of Orchidaceae,we provide a comprehensive overview and analysis of phylogenetic studies focusing on contentious groups within Orchidaceae since 2015,delving into discussions on the underlying reasons for observed topological conflicts.We also provide a novel phylogenetic framework at the subtribal level.Furthermore,we examine the tempo and mode underlying orchid species diversity from the perspective of historical biogeography,highlighting factors contributing to extensive speciation.Ultimately,we delineate avenues for future research aimed at enhancing our understanding of Orchidaceae phylogeny and diversity. 展开更多
关键词 Diversification Orchid phylogenetics Phylogenetic conflicts BIOGEOGRAPHY Taxonomy
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Lipid concentration and composition in xylem sap of woody angiosperms from a tropical savanna and a seasonal rainforest
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作者 Ling-Bo Huang Xinyi Guan +3 位作者 Amy Ny Aina Aritsara Jun-Jie Zhu Steven Jansen Kun-Fang Cao 《Plant Diversity》 SCIE CAS CSCD 2024年第1期126-133,共8页
Lipids may play an important role in preventing gas embolisms by coating nanobubbles in xylem sap.Few studies on xylem sap lipids have been reported for temperate plants,and it remain unclear whether sap lipids have a... Lipids may play an important role in preventing gas embolisms by coating nanobubbles in xylem sap.Few studies on xylem sap lipids have been reported for temperate plants,and it remain unclear whether sap lipids have adaptational significance in tropical plants.In this study,we quantify the lipid composition of xylem sap for angiosperm species from a tropical savanna(seven species)and a seasonal rainforest(five species)using mass spectrometry.We found that all twelve species studied contained lipids in their xylem sap,including galactolipids,phospholipids and triacylglycerol,with a total lipid concentration ranging from 0.09 to 0.26 nmol/L.There was no difference in lipid concentration or composition between plants from the two sites,and the lipid concentration was negatively related to species’open vessel volume.Furthermore,savanna species showed little variation in lipid composition between the dry and the rainy season.These results support the hypothesis that xylem sap lipids are derived from the cytoplasm of individual conduit cells,remain trapped inside individual conduits,and undergo few changes in composition over consecutive seasons.A xylem sap lipidomic data set,which includes 12 tropical tree species from this study and 11 temperate tree species from literature,revealed no phylogenetic signals in lipid composition for these species.This study fills a knowledge gap in the lipid content of xylem sap in tropical trees and provides additional support for their common distribution in xylem sap of woody angiosperms.It appears that xylem sap lipids have no adaptive significance. 展开更多
关键词 Xylem sap LIPIDS Tropical savanna Tropical rainforest Vessels
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Nutritional values,bioactive compounds and health benefits of purslane(Portulaca oleracea L.):a comprehensive review
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作者 Yanxi Li Longgao Xiao +3 位作者 Huan Yan Mingyi Wu Xiaojiang Hao Haiyang Liu 《Food Science and Human Wellness》 SCIE CAS CSCD 2024年第5期2480-2501,共22页
Portulaca oleracea L.,commonly known as purslane,is a worldwide weed species belonging to the family Portulacaceae and has been known as“Global Panacea”.As one of the most widely consumed green vegetables and medici... Portulaca oleracea L.,commonly known as purslane,is a worldwide weed species belonging to the family Portulacaceae and has been known as“Global Panacea”.As one of the most widely consumed green vegetables and medicinal plants around the world,it has recently been re-evaluated as a potential“new crop”due to the properties that differentiate it as one of the best vegetable sources of omega-3 fatty acid(α-linolenic acid),as well as a variety of nutrients and phytochemicals.Accordingly,emerging research has found that purslane exhibits health-promoting properties like anti-inflammatory,anti-hyperglycemic,antioxidant,neuroprotective,and immunomodulatory.These findings suggest that this species possesses a potential using as a dietary supplement beyond potherb and traditional medicine.This review systematically summarizes the up-to-date research carried out on purslane,including the nutritional compositions,bioactive compounds,and health benefits it exerts as well as limitations,challenges,and future directions of research.Finally,we hope that this review would provide purslane with a comprehensive reference and future scope as functional and health-promoting food for disease prevention and treatment. 展开更多
关键词 Purslane Nutritional compositions Bioactive compounds POLYSACCHARIDES Functional foods
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Review on dietary supplements as an effective improvement of Alzheimer's disease:focus on structures and mechanisms
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作者 Sheng Li Yinling Wei +3 位作者 Zhenzhen Liang Lingli Guo Xiaojiang Hao Yu Zhang 《Food Science and Human Wellness》 SCIE CAS CSCD 2024年第4期1787-1805,共19页
Alzheimer’s disease(AD),the major form of neurodegenerative diseases that can severely impede normal cognitive function,makes it one of the most common fatal diseases.There are currently over 50 million AD patients w... Alzheimer’s disease(AD),the major form of neurodegenerative diseases that can severely impede normal cognitive function,makes it one of the most common fatal diseases.There are currently over 50 million AD patients worldwide.The neuropathology of AD is perplexing and there is a scarcity of disease-modifying treatments.Currently,early diagnosis of AD has been made possible with the discovery of biological markers associated with pathology,providing strong support for the improvement of the disease status.The search for inhibitors of AD markers from dietary supplements(DSs)has become a major hot topic.Especially with the widespread use of DSs,DSs containing polyphenols,alkaloids,terpenes,polysaccharides and other bioactive components can prevent AD by reducing Aβdeposition,inhibiting tau protein hyperphosphorylation,reconstructing synaptic dysfunction,weakening cholinesterase activity,regulating mitochondrial oxidative stress,neuronal inflammation and apoptosis.This review summarizes the anti-AD effects of the main DSs and their bioactive constituents,as well as the potential molecular mechanisms covers from 2017 to 2023.Additionally,we discussed the opportunities and challenges faced by DSs in the process of AD prevention and treatment,aiming to further provide new perspectives for functional food development. 展开更多
关键词 Dietary supplements Bioactive ingredients Alzheimer’s disease Mechanism of action
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The unimodal latitudinal pattern of K,Ca and Mg concentration and its potential drivers in forest foliage in eastern China
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作者 Zhijuan Shi Sining Liu +2 位作者 Yahan Chen Dongdong Ding Wenxuan Han 《Forest Ecosystems》 SCIE CSCD 2024年第3期318-328,共11页
Potassium(K),calcium(Ca),and magnesium(Mg)are essential elements with important physiological functions in plants.Previous studies showed that leaf K,Ca,and Mg concentrations generally increase with increasing latitud... Potassium(K),calcium(Ca),and magnesium(Mg)are essential elements with important physiological functions in plants.Previous studies showed that leaf K,Ca,and Mg concentrations generally increase with increasing latitudes.However,recent meta-analyses suggested the possibility of a unimodal pattern in the concentrations of these elements along latitudinal gradients.The authenticity of this unimodal latitudinal pattern,however,requires validation through large-scale field experimental data,and exploration of the underlying mechanisms if the pattern is confirmed.Here,we collected leaves of common species of woody plants from 19 montane forests in the north-south transect of eastern China,including 322 species from 160 genera,67 families;and then determined leaf K,Ca,and Mg concentrations to explore their latitudinal patterns and driving mechanisms.Our results support unimodal latitudinal patterns for all three elements in woody plants across eastern China,with peak values at latitude 36.5±1.0°N.The shift of plant-functional-type compositions from evergreen broadleaves to deciduous broadleaves and to conifers along this latitudinal span was the key factor contributing to these patterns.Climatic factors,mainly temperature,and to a lesser extent solar radiation and precipitation,were the main environmental drivers.These factors,by altering the composition of plant communities and regulating plant physiological activities,influence the latitudinal patterns of plant nutrient concentrations.Our findings also suggest that high leaf K,Ca,and Mg concentrations may represent an adaptive strategy for plants to withstand water stress,which might be used to predict plant nutrient responses to climate changes at large scales,and broaden the understanding of biogeochemical cycling of K,Ca,and Mg. 展开更多
关键词 POTASSIUM Calcium Magnesium Mid-latitudes Latitudinal pattern Plant functional type Water stress Woody plant
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Large-scale interplant exchange of macromolecules between soybean and dodder under nutrient stresses
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作者 Jingxiong Zhang Shalan Li +9 位作者 Wenxing Li Zerui Feng Shuhan Zhang Xijie Zheng Yuxing Xu Guojing Shen Man Zhao Guoyan Cao Xuna Wu Jianqiang Wu 《Plant Diversity》 SCIE CAS CSCD 2024年第1期116-125,共10页
Parasitic plants and their hosts communicate through haustorial connections.Nutrient deficiency is a common stress for plants,yet little is known about whether and how host plants and parasites communicate during adap... Parasitic plants and their hosts communicate through haustorial connections.Nutrient deficiency is a common stress for plants,yet little is known about whether and how host plants and parasites communicate during adaptation to such nutrient stresses.In this study,we used transcriptomics and proteomics to analyze how soybean(Glycine max)and its parasitizing dodder(Cuscuta australis)respond to nitrate and phosphate deficiency(-N and-P).After-N and-P treatment,the soybean and dodder plants exhibited substantial changes of transcriptome and proteome,although soybean plants showed very few transcriptional responses to-P and dodder did not show any transcriptional changes to either-N or-P.Importantly,large-scale interplant transport of mRNAs and proteins was detected.Although the mobile mRNAs only comprised at most 0.2%of the transcriptomes,the foreign mobile proteins could reach 6.8%of the total proteins,suggesting that proteins may be the major forms of interplant communications.Furthermore,the interplant mobility of macromolecules was specifically affected by the nutrient regimes and the transport of these macromolecules was very likely independently regulated.This study provides new insight into the communication between host plants and parasites under stress conditions. 展开更多
关键词 CUSCUTA Mobile molecules Nutrient deficiency Host plant-parasitic plant interaction Interplant transport Systemic signaling
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