Nitrogen(N)is a critical element for plant growth and productivity that influences photosynthesis and chlorophyll fluorescence.We investigated the effect of low-N stress on leaf photosynthesis and chlorophyll fluoresc...Nitrogen(N)is a critical element for plant growth and productivity that influences photosynthesis and chlorophyll fluorescence.We investigated the effect of low-N stress on leaf photosynthesis and chlorophyll fluorescence characteristics of maize cultivars with difference in tolerance to low N levels.The low-N tolerant cultivar ZH311 and low-N sensitive cultivar XY508 were used as the test materials.A field experiment(with three N levels:N0,0 kg ha–1;N1,150 kg ha–1;N2,300 kg ha–1)in Jiyanyang,Sichuan Province,China,and a hydroponic experiment(with two N levels:CK,4 mmol L–1;LN,0.04 mmol L–1)in Chengdu,Sichuan Province,China were conducted.Low-N stress significantly decreased chlorophyll content and rapid light response curves of the maximum fluorescence under light(Fm′),fluorescence instable state(Fs),non-photochemical quenching(qN),the maximum efficiency of PSII photochemistry under dark-adaption(Fv/Fm),potential activity of PSII(Fv/Fo),and actual photochemical efficiency of PSII(ΦPSII)of leaves.Further,it increased the chlorophyll(Chl)a/Chl b values and so on.The light compensation point of ZH311 decreased,while that of XY508 increased.The degree of variation of these indices in low-N tolerant cultivars was lower than that in low-N sensitive cultivars,especially at the seedling stage.Maize could increase Chl a/Chl b,apparent quantum yield and light saturation point to adapt to N stress.Compared to low-N sensitive cultivars,low-N tolerant cultivars maintained a higher net photosynthetic rate and electron transport rate to maintain stronger PSII activity,which further promoted the ability to harvest and transfer light.This might be a photosynthetic mechanism by which low-N tolerant cultivar adapt to low-N stress.展开更多
To investigate the effect of nitrogen management on the grain-filling characteristics and yield formation of maize cultivars with contrasting nitrogen efficiencies,and to identify differences in grain-filling characte...To investigate the effect of nitrogen management on the grain-filling characteristics and yield formation of maize cultivars with contrasting nitrogen efficiencies,and to identify differences in grain-filling characteristics and yield of maize cultivars in response to nitrogen management,a two-year field experiment was conducted in southwest China in2015–2016.The grain-filling rate and duration of the N-inefficient cultivar XY 508 were higher than those of the N-efficient cultivar ZH 311.The 100-kernel weight of XY 508 was significantly higher than that of ZH 311.The kernel number per ear of ZH 311 was significantly higher than that of XY 508,making the population filling rate of ZH 311 significantly higher than that of XY 508.The higher population filling rate of the N-efficient maize cultivar led to a significant yield advantage over the N-inefficient maize cultivar.Nitrogen management effectively improved maize grain yield,but the response of maize cultivars with contrasting nitrogen efficiencies to nitrogen management was inconsistent.A basal fertilizer ratio 60.43%with a topdressing ratio 39.57%effectively increased grainfilling rate,delayed the time to maximum filling rate,prolonged the active filling period and effective grain-filling time,increased the 100-kernel weight,and maintained higher kernels per ear,thereby improving the population filling rate and maximizing the yield advantage of the N-efficient cultivar.A 100%basal fertilizer ratio not only increased the number of kernels per ear,but also maintained high grain filling characteristics to obtain a higher 100-kernel weight and increased the population filling rate,leading to a high grain yield in the N-inefficient cultivar.Thus,the 100%basal fertilizer ratio partially compensated for the deficient grain yield of the N-inefficient cultivar.展开更多
Ginger(Zingiber officinale),the type species of Zingiberaceae,is one of the most widespread medicinal plants and spices.Here,we report a high-quality,chromosome-scale reference genome of ginger‘Zhugen’,a traditional...Ginger(Zingiber officinale),the type species of Zingiberaceae,is one of the most widespread medicinal plants and spices.Here,we report a high-quality,chromosome-scale reference genome of ginger‘Zhugen’,a traditionally cultivated ginger in Southwest China used as a fresh vegetable,assembled from PacBio long reads,Illumina short reads,and high-throughput chromosome conformation capture(Hi-C)reads.The ginger genome was phased into two haplotypes,haplotype 1(1.53 Gb with a contig N50 of 4.68 M)and haplotype 0(1.51 Gb with a contig N50 of 5.28 M).Homologous ginger chromosomes maintained excellent gene pair collinearity.In 17,226 pairs of allelic genes,11.9%exhibited differential expression between alleles.Based on the results of ginger genome sequencing,transcriptome analysis,and metabolomic analysis,we proposed a backbone biosynthetic pathway of gingerol analogs,which consists of 12 enzymatic gene families,PAL,C4H,4CL,CST,C3’H,C3OMT,CCOMT,CSE,PKS,AOR,DHN,and DHT.These analyses also identified the likely transcription factor networks that regulate the synthesis of gingerol analogs.Overall,this study serves as an excellent resource for further research on ginger biology and breeding,lays a foundation for a better understanding of ginger evolution,and presents an intact biosynthetic pathway for species-specific gingerol biosynthesis.展开更多
Living fossils are evidence of long-term sustained ecological success.However,whether living fossils have little molecular changes remains poorly known,particularly in plants.Here,we have introduced a novel method tha...Living fossils are evidence of long-term sustained ecological success.However,whether living fossils have little molecular changes remains poorly known,particularly in plants.Here,we have introduced a novel method that integrates phylogenomic,comparative genomic,and ecological niche modeling analyses to investigate the rate of molecular evolution of Eupteleaceae,a Cretaceous relict angiosperm family endemic to East Asia.We assembled a high-quality chromosome-level nuclear genome,and the chloroplast and mitochondrial genomes of a member of Eupteleaceae(Euptelea pleiosperma).Our results show that Eupteleaceae is most basal in Ranunculales,the earliest-diverging order in eudicots,and shares an ancient whole-genome duplication event with the other Ranunculales.We document that Eupteleaceae has the slowest rate of molecular changes in the observed angiosperms.The unusually low rate of molecular evolution of Eupteleaceae across all three independent inherited genomes and genes within each of the three genomes is in association with its conserved genome architecture,ancestral woody habit,and conserved niche requirements.Our findings reveal the evolution and adaptation of living fossil plants through large-scale environmental change and also provide new insights into early eudicot diversification.展开更多
Genetic manipulation of genes to upregulate specific branches of metabolic pathways is a method that is commonly used to improve fruit quality.However,the use of a single gene to impact several metabolic pathways is d...Genetic manipulation of genes to upregulate specific branches of metabolic pathways is a method that is commonly used to improve fruit quality.However,the use of a single gene to impact several metabolic pathways is difficult.Here,we show that overexpression of the single gene SlMYB75(SlMYB75-OE)is effective at improving multiple fruit quality traits.In these engineered fruits,the anthocyanin content reached 1.86mg g−1 fresh weight at the red-ripe stage,and these SlMYB75-OE tomatoes displayed a series of physiological changes,including delayed ripening and increased ethylene production.In addition to anthocyanin,the total contents of phenolics,flavonoids and soluble solids in SlMYB75-OE fruits were enhanced by 2.6,4,and 1.2 times,respectively,compared to those of wild-type(WT)fruits.Interestingly,a number of aroma volatiles,such as aldehyde,phenylpropanoid-derived and terpene volatiles,were significantly increased in SlMYB75-OE fruits,with some terpene volatiles showing more than 10 times higher levels than those in WT fruits.Consistent with the metabolic assessment,transcriptomic profiling indicated that the genes involved in the ethylene signaling,phenylpropanoid and isoprenoid pathways were greatly upregulated in SlMYB75-OE fruits.Yeast one-hybrid and transactivation assays revealed that SlMYB75 is able to directly bind to the MYBPLANT and MYBPZM cis-regulatory elements and to activate the promoters of the LOXC,AADC2 and TPS genes.The identification of SlMYB75 as a key regulator of fruit quality attributes through the transcriptional regulation of downstream genes involved in several metabolic pathways opens new avenues towards engineering fruits with a higher sensory and nutritional quality.展开更多
Grain water relations play an important role in grain filling in maize. The study aimed to gain a clear understanding of the changes in grain dry weight and water relations in maize grains by using hybrids with contra...Grain water relations play an important role in grain filling in maize. The study aimed to gain a clear understanding of the changes in grain dry weight and water relations in maize grains by using hybrids with contrasting nitrogen efficiencies under differing nitrogen levels. The objectives were: 1) to understand the changes in dry matter and percent moisture content(MC) during grain development in response to different nitrogen application rates and 2) to determine whether nitrogen application affects grain filling by regulating grain water relations. Two maize hybrids, high N-efficient Zhenghong 311(ZH311) and low N-efficient Xianyu 508(XY508), were grown in the field under four levels of N fertilizer: 0, 150, 300, and 450 kg N ha;during three growing seasons. Dry weight, percent MC and water content(WC) of basal-middle and apical grains were investigated. The difference in the maximum WC and filling duration of basal-middle and apical grains in maize ears resulted in a significant difference in final grain weight. Grain position markedly influenced grain drying down;specifically, the drying down rate of apical grains was faster than that of basal-middle grains. Genotype and grain position both influenced the impact of nitrogen application rate on grain filling and drying down. Nitrogen rate determined the maximum grain WC and percent MC loss rate in the middle and the late grain-filling stages, thus affecting final grain weight. The use of high N-efficient hybrids, combined with the reduction of nitrogen application rate, can coordinate basal-middle and apical grain drying down to ensure yield. This management strategy could lead to a win-win situation in which the maximum maize yield, efficient mechanical harvest and environmental safety are all achieved.展开更多
基金financially supported by the Sichuan Key Technology Support Program of China (2014NZ0040)the Special Fund for Agro-scientific Research in the Public Interest of China (20150312705)
文摘Nitrogen(N)is a critical element for plant growth and productivity that influences photosynthesis and chlorophyll fluorescence.We investigated the effect of low-N stress on leaf photosynthesis and chlorophyll fluorescence characteristics of maize cultivars with difference in tolerance to low N levels.The low-N tolerant cultivar ZH311 and low-N sensitive cultivar XY508 were used as the test materials.A field experiment(with three N levels:N0,0 kg ha–1;N1,150 kg ha–1;N2,300 kg ha–1)in Jiyanyang,Sichuan Province,China,and a hydroponic experiment(with two N levels:CK,4 mmol L–1;LN,0.04 mmol L–1)in Chengdu,Sichuan Province,China were conducted.Low-N stress significantly decreased chlorophyll content and rapid light response curves of the maximum fluorescence under light(Fm′),fluorescence instable state(Fs),non-photochemical quenching(qN),the maximum efficiency of PSII photochemistry under dark-adaption(Fv/Fm),potential activity of PSII(Fv/Fo),and actual photochemical efficiency of PSII(ΦPSII)of leaves.Further,it increased the chlorophyll(Chl)a/Chl b values and so on.The light compensation point of ZH311 decreased,while that of XY508 increased.The degree of variation of these indices in low-N tolerant cultivars was lower than that in low-N sensitive cultivars,especially at the seedling stage.Maize could increase Chl a/Chl b,apparent quantum yield and light saturation point to adapt to N stress.Compared to low-N sensitive cultivars,low-N tolerant cultivars maintained a higher net photosynthetic rate and electron transport rate to maintain stronger PSII activity,which further promoted the ability to harvest and transfer light.This might be a photosynthetic mechanism by which low-N tolerant cultivar adapt to low-N stress.
基金supported by the National Key Research and Development Program of China(2016YFD0300307 and 2016YFD0300209)the Special Fund for Agro-scientific Research in the Public Interest of China(20150312705)the Sichuan Agriculture Research System of Maize Industry。
文摘To investigate the effect of nitrogen management on the grain-filling characteristics and yield formation of maize cultivars with contrasting nitrogen efficiencies,and to identify differences in grain-filling characteristics and yield of maize cultivars in response to nitrogen management,a two-year field experiment was conducted in southwest China in2015–2016.The grain-filling rate and duration of the N-inefficient cultivar XY 508 were higher than those of the N-efficient cultivar ZH 311.The 100-kernel weight of XY 508 was significantly higher than that of ZH 311.The kernel number per ear of ZH 311 was significantly higher than that of XY 508,making the population filling rate of ZH 311 significantly higher than that of XY 508.The higher population filling rate of the N-efficient maize cultivar led to a significant yield advantage over the N-inefficient maize cultivar.Nitrogen management effectively improved maize grain yield,but the response of maize cultivars with contrasting nitrogen efficiencies to nitrogen management was inconsistent.A basal fertilizer ratio 60.43%with a topdressing ratio 39.57%effectively increased grainfilling rate,delayed the time to maximum filling rate,prolonged the active filling period and effective grain-filling time,increased the 100-kernel weight,and maintained higher kernels per ear,thereby improving the population filling rate and maximizing the yield advantage of the N-efficient cultivar.A 100%basal fertilizer ratio not only increased the number of kernels per ear,but also maintained high grain filling characteristics to obtain a higher 100-kernel weight and increased the population filling rate,leading to a high grain yield in the N-inefficient cultivar.Thus,the 100%basal fertilizer ratio partially compensated for the deficient grain yield of the N-inefficient cultivar.
基金This work was supported by funding from the Ginger Genome Project of Chongqing University of Arts and Sciences(2018)the Natural Science Foundation of Chongqing(cstc2019jcyj-msxmX0300,cstc2019jcyj-msxmX0697,CQYC201903201,cstc2019jscx-dxwtBX0028)+4 种基金the Foundation for High-level Talents of Chongqing University of Arts and Science(2017RTZ21,P2018TZ05)the Scientific and Technological Research Program of Chongqing Municipal Education Commission(KJZD-K202001304,KJQN201801339,KJQN201801330,KJQN201801335)the Foundation of Hubei Rural Science and Technology(2020BBA037)the State Key Research and Development Program of Hubei(2020BBA037)the Foundation of Laiwu Experimental Station of the National Characteristic Vegetable Industry System.
文摘Ginger(Zingiber officinale),the type species of Zingiberaceae,is one of the most widespread medicinal plants and spices.Here,we report a high-quality,chromosome-scale reference genome of ginger‘Zhugen’,a traditionally cultivated ginger in Southwest China used as a fresh vegetable,assembled from PacBio long reads,Illumina short reads,and high-throughput chromosome conformation capture(Hi-C)reads.The ginger genome was phased into two haplotypes,haplotype 1(1.53 Gb with a contig N50 of 4.68 M)and haplotype 0(1.51 Gb with a contig N50 of 5.28 M).Homologous ginger chromosomes maintained excellent gene pair collinearity.In 17,226 pairs of allelic genes,11.9%exhibited differential expression between alleles.Based on the results of ginger genome sequencing,transcriptome analysis,and metabolomic analysis,we proposed a backbone biosynthetic pathway of gingerol analogs,which consists of 12 enzymatic gene families,PAL,C4H,4CL,CST,C3’H,C3OMT,CCOMT,CSE,PKS,AOR,DHN,and DHT.These analyses also identified the likely transcription factor networks that regulate the synthesis of gingerol analogs.Overall,this study serves as an excellent resource for further research on ginger biology and breeding,lays a foundation for a better understanding of ginger evolution,and presents an intact biosynthetic pathway for species-specific gingerol biosynthesis.
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences(XDB31030000)the National Natural Science Foundation of China(32170210,32170238,31770231,31770233)+2 种基金the Science,Technology,and Innovation Commission of Shenzhen Municipality of China(RCYX20200714114538196)K.C.Wong Education Foundation(GJTD-2020-05)Innovation Program of Chinese Academy of Agricultural Sciences。
文摘Living fossils are evidence of long-term sustained ecological success.However,whether living fossils have little molecular changes remains poorly known,particularly in plants.Here,we have introduced a novel method that integrates phylogenomic,comparative genomic,and ecological niche modeling analyses to investigate the rate of molecular evolution of Eupteleaceae,a Cretaceous relict angiosperm family endemic to East Asia.We assembled a high-quality chromosome-level nuclear genome,and the chloroplast and mitochondrial genomes of a member of Eupteleaceae(Euptelea pleiosperma).Our results show that Eupteleaceae is most basal in Ranunculales,the earliest-diverging order in eudicots,and shares an ancient whole-genome duplication event with the other Ranunculales.We document that Eupteleaceae has the slowest rate of molecular changes in the observed angiosperms.The unusually low rate of molecular evolution of Eupteleaceae across all three independent inherited genomes and genes within each of the three genomes is in association with its conserved genome architecture,ancestral woody habit,and conserved niche requirements.Our findings reveal the evolution and adaptation of living fossil plants through large-scale environmental change and also provide new insights into early eudicot diversification.
基金supported by the National Key Research and Development Program(2016YFD0400101)the National Natural Science Foundation of China(31572175,31772370)+1 种基金the Fundamental Research Funds for the Central Universities(2018CDXYSM0021)the Committee of Science and Technology of Chongqing(cstckjcxljrc15).
文摘Genetic manipulation of genes to upregulate specific branches of metabolic pathways is a method that is commonly used to improve fruit quality.However,the use of a single gene to impact several metabolic pathways is difficult.Here,we show that overexpression of the single gene SlMYB75(SlMYB75-OE)is effective at improving multiple fruit quality traits.In these engineered fruits,the anthocyanin content reached 1.86mg g−1 fresh weight at the red-ripe stage,and these SlMYB75-OE tomatoes displayed a series of physiological changes,including delayed ripening and increased ethylene production.In addition to anthocyanin,the total contents of phenolics,flavonoids and soluble solids in SlMYB75-OE fruits were enhanced by 2.6,4,and 1.2 times,respectively,compared to those of wild-type(WT)fruits.Interestingly,a number of aroma volatiles,such as aldehyde,phenylpropanoid-derived and terpene volatiles,were significantly increased in SlMYB75-OE fruits,with some terpene volatiles showing more than 10 times higher levels than those in WT fruits.Consistent with the metabolic assessment,transcriptomic profiling indicated that the genes involved in the ethylene signaling,phenylpropanoid and isoprenoid pathways were greatly upregulated in SlMYB75-OE fruits.Yeast one-hybrid and transactivation assays revealed that SlMYB75 is able to directly bind to the MYBPLANT and MYBPZM cis-regulatory elements and to activate the promoters of the LOXC,AADC2 and TPS genes.The identification of SlMYB75 as a key regulator of fruit quality attributes through the transcriptional regulation of downstream genes involved in several metabolic pathways opens new avenues towards engineering fruits with a higher sensory and nutritional quality.
基金funding support from the National Key Research and Development Program of China(2018YFD0301206,2016YFD0300209,2016YFD0300307,and 2017YFD0301704)。
文摘Grain water relations play an important role in grain filling in maize. The study aimed to gain a clear understanding of the changes in grain dry weight and water relations in maize grains by using hybrids with contrasting nitrogen efficiencies under differing nitrogen levels. The objectives were: 1) to understand the changes in dry matter and percent moisture content(MC) during grain development in response to different nitrogen application rates and 2) to determine whether nitrogen application affects grain filling by regulating grain water relations. Two maize hybrids, high N-efficient Zhenghong 311(ZH311) and low N-efficient Xianyu 508(XY508), were grown in the field under four levels of N fertilizer: 0, 150, 300, and 450 kg N ha;during three growing seasons. Dry weight, percent MC and water content(WC) of basal-middle and apical grains were investigated. The difference in the maximum WC and filling duration of basal-middle and apical grains in maize ears resulted in a significant difference in final grain weight. Grain position markedly influenced grain drying down;specifically, the drying down rate of apical grains was faster than that of basal-middle grains. Genotype and grain position both influenced the impact of nitrogen application rate on grain filling and drying down. Nitrogen rate determined the maximum grain WC and percent MC loss rate in the middle and the late grain-filling stages, thus affecting final grain weight. The use of high N-efficient hybrids, combined with the reduction of nitrogen application rate, can coordinate basal-middle and apical grain drying down to ensure yield. This management strategy could lead to a win-win situation in which the maximum maize yield, efficient mechanical harvest and environmental safety are all achieved.