Infl uence of altitude and tree class on climate-growth relationships in a larch plantation in subtropical China

Precise quantifi cation of climate-growth relationships can make a major contribution to scientifi c forest management.However,whether diff erences in the response of growth to climate at diff erent altitudes remains unclear.To answer this,264 trees of Larix kaempferi from 88 plots,representing diff erent altitudinal ranges(1000-2100 m)and tree classes were sampled and used to develop tree-ring chronologies.Tree-ring growth(TRG)was either positively(dominant)or negatively(intermediate and suppressed)correlated with climate in diff erent tree classes at diff erent altitudes.TRG was strongly correlated with growing season at low altitudes,but was less sensitive to climate at middle altitudes.It was mainly limited by precipitation and was highly sensitive to climate at low altitudes.Climate-growth relationships at high altitudes were opposite compared to those at low altitudes.TRG of dominant trees was more sensitive to climate change compared to intermediate and suppressed trees.Climate factors(annual temperatures;moisture,the number of frost-free days)had diff erent eff ects on tree-ring growth of diff erent tree classes along altitudinal gradients.It was concluded that the increase in summer temperatures decreased water availability,resulting in a signifi cant decline in growth rates after 2005 at lower altitudes.L.kaempferi is suitable for planting in middle altitudes and dominant trees were the best sampling choice for accurately assessing climate-growth relationships.

Relationship between species diversity and tree size in natural forests around the Tropic of Cancer

Although numerous hypotheses have been proposed to explain the patterns of species diversity of forests at local and landscape levels,it is still difficult to predict the alpha diversity of species,especially in tropical and subtropical natural forests where trees of different sizes and shapes are highly mixed.Size might characterize species diversity,and the possible correlation between these variables may contribute to the development of easy-to-use growth indicators to predict diversity and to understand the status of trees within a stand.In this study,diameter classes were divided using the equal diameter class(EDC)and minimum measured diameter(MMD)methods,and five species diversity indices were calculated for each diameter class of 14 permanent plots in five national nature reserves surrounding the Tropic of Cancer(23.5°),southwest China.The results show that species richness,abundance,and spatial diversity indices decreased in a typical inverted J-shape pattern with increasing diameter class and MMD,and could be easily modeled by a negative exponential function.The ShannonWiener index showed a linear decrease while Pielou’s evenness index displayed a linear increase,with a small degree of instability.The results suggest that species diversity in subtropical forests is closely related to tree size,and the relationship is possibly independent of habitat.Measuring DBH of some trees in a stand could be informative regarding species diversity and contribute to the investigation and assessment of biodiversity.

Transcriptome-based identification and expression analysis of the glutathione S-transferase(GST)family in tree peony reveals a likely role in anthocyanin transport

For red-flowered cultivars of tree peony(Paeonia suffruticosa),anthocyanin content is a critical factor determining the different petal pigmentations.Glutathione S-transferases(GSTs)are ubiquitous and multifunctional conjugating proteins that may be responsible for the transport of anthocyanin pigments from the cytoplasm to vacuole.The underlying function of the GST family in tree peony,however,remains unclear.In this study,we systematically isolated and identified a total of 54 putative full-length Ps GST genes through a combination of bioinformatics approaches from transcriptome databases.Intraspecific phylogenetic analyses revealed extensive differentiation in their coding sequences and divided them into 10 of the 14 known classes of plant GSTs.The phylogenetic relationships,evolutionary characteristics,protein domain,and motif organization were clearly conserved among the different phylogenetic subclasses.The results of the RNA-seq and quantitative real-time polymerase chain reaction experiments exhibited extensive variation in gene expression profiles among different developmental stages and varieties.Furthermore,the phylogenetic relationships,expression profiles,protein interactions,weighted gene co-expression network analysis,and correlation analysis results suggested that PsGSTF3(Unigene 0064200)is a candidate participant in anthocyanin transport and the promotion of pigment accumulation,exhibiting a strong positive correlation with anthocyanin content among different tissues(r=0.908**)and an increasing rate of anthocyanin content during the flower developmental process(r=0.961*).These results furthered our understanding of the transport and accumulation functions of the GST family as well as the enhancement of tree peony breeding through molecular biology techniques.

Global woodland structure from local interactions:new nearest-neighbour functions for understanding the ontogenesis of global forest structure

Background:A number of hypotheses and theories,such as the Janzen-Connell hypothesis,have been proposed to explain the natural maintenance of biodiversity in tropical and temperate forest ecosystems.However,to date the details of the processes behind this natural maintenance are still unclear.Recently two new nearest-neighbour characteristics were proposed and in this paper we demonstrate how they can contribute to a better understanding of the ontogenesis of global forest structure from localised neighbourhoods.Methods:We applied the new species and size segregation functions together with appropriate test procedures to four example woodland data sets from China at Daqingshan,Jiaohe,Jiulongshan and Xiaolongshan forest regions.In addition we quantified the morphology of the new characteristics and modelled a neighbourhood allometric coefficient linking the two functions.Results:The results revealed quite different species segregation patterns with both conspecific and heterospecific attraction.We found these to be generally matched by equivalent size segregation patterns of attraction of similar and different sizes.It was straightforward to model the size segregation function from the knowledge of the species segregation function by estimating a neighbourhood allometric coefficient.Conclusions:The new characteristics have helped to quantify the extent and rate of decline of neighbourhood interactions in terms of spatial species and size diversity.Through the allometric neighbourhood coefficient the analysis highlighted once more how closely related species and size segregation are,thus supporting the minglingsize hypothesis.Using both a traditional and a restricted random-labelling test has provided a valuable tool for understanding the exact nature of species-mingling and size-inequality relationships.

Transcriptome Profiling of the Salt-Stress Response in Paper Mulberry

Paper mulberry is a high-quality woody feed resource plant with high crude protein content.It is widely distributed in China and has excellent characteristics of salt and alkali tolerance.Paper mulberry has ecological and economic importance.Salt stress has become a critical factor with the increasing degree of soil salinity that restricts plant growth.In the saline-alkali environments,transcriptome expression is altered leading to phenotypic defects in most plants.However,the regulatory mechanism related to paper mulberry’s salt-stress(SS)response is not clearly understood.In the present study de novo transcriptomic assembly was performed,and gene expression levels were measured between different SS and natural conditions(25℃)as a control for paper mulberry plants.According to the results of our study,under NaCl stress conditions,the differential gene expression was observed in the leaves of paper mulberry compared with the control.A total of 2126 differentially expressed unigenes were observed.Among these unigenes the expression of 812 DEGs was up-regulated and the expression of 1,314 DEGs was down-regulated.Additionally,The GO and KEGG analyses regarding differentially expressed unigenes(DEUs)revealed that the observed critical transcriptomic alterations under salt stress(SS)conditions were associated with primary and secondary metabolism,photosynthesis,and plant hormone signaling pathways.Further investigations such as gene function studies regarding the unigenes depicting altered expression under salt stress conditions in paper mulberry will help understand the mechanism of salt tolerance,and this information can be utilized in paper mulberry breeding and improvement programs.

Comparative analysis of the complete chloroplast genomes of six white oaks with high ecological amplitude in China

Quercus L.has significant societal,ecological and economic benefits in the Northern Hemisphere.However,species identification among oaks is notoriously difficult.China harbours highly diverse oaks,of which the diversity of white oaks is the most extensive;however,to date,the evolution of chloroplast(cp)genomes in white oaks in China has not been comprehensively studied.Thus,we sequenced the complete cp genomes(161,254 bp,161,229 bp and 161,254 bp in size)of three white oak species(Quercus serrata Thunb.var.brevipetiolata A.DC.Nakai,Quercus wutaishansea Mary and Quercus mongolica Fischer ex Ledebour,respectively).Six white oak species(Quercus aliena Blume,Quercus dentata Thunb.,Quercus aliena Blume var.acutiserrata Maximowicz ex Wenzig,Q.serrata var.brevipetiolata,Q.wutaishanica and Q.mongolica)and five other Fagaceae species(Quercus rubra L.,Quercus variabilis Bl.,Quercus aquifolioid.es Rehd.et Wils.,Fagus engleriana Seem.and Castanea henryi Skan Rehd.et Wils.)were retrieved for comparative analyses.We detected11 highly divergent regions(psbA,matK/rps16,rps16,trnSGCU/trnG-GCC,trnR-UCU/atpA,trnT-GGU/psbD,ndhJ,ndhJ/ndhK,accD,ndhF and ycfl)through comparative analyses and these regions might be used as molecular markers.Theωratio of the rps12,rpoC2 and ycf1 genes was greater than 1 in several comparison groups between white oaks and the petA gene was subjected to significant positive selection between the comparison of six white oaks and Q.variabilis.Phylogenetic analyses revealed that six white oaks were grouped with Q.rubra,forming a single clade.

Site index for Chinese fir plantations varies with climatic and soil factors in southern China

Chinese fir[Cunninghamia lanceolata(Lamb.)Hook.]has a large native distribution range in southern China.Here,we tested differences in productivity of Chinese fir plantations in different climatic regions and screened the main environmental factors affecting site productivity in each region.Relationships of a Chinese fir site index with climatic factors and the soil physiochemical properties of five soil layers were examined in a long-term positioning observation trial comprising a total of 45 permanent plots in Fujian(eastern region in the middle subtropics),Guangxi(south subtropics)and Sichuan(central region in the middle subtropics)in southern China.Linear mixed effects models were developed to predict the site index for Chinese fir,which was found to vary significantly among different climatic regions.Available P,total N,bulk density and total K were dominant predictors of site index in three climatic regions.The regional linear mixed models built using these predictors in the three climatic regions fit well(R~2=0.86–0.97).For the whole study area,the available P in the 0–20-cm soil layer and total N in the 80–100-cm soil layer were the most indicative soil factors.MAP was the most important climatic variable influencing the site index.The model evaluation results showed that the fitting performance and prediction accuracy of the global site index model using the climatic region as the dummy variable and random parameters and the most important soil factors of the three climatic regions as predictors was higher than that of global site index model using the climatic variable and the most indicative soil variables of the whole study area.Our results will help with further evaluation of site quality of Chinese fir plantations and the selection of its appropriate sites in southern China as the climatic changes.

Energy partitioning and evapotranspiration in a black locust plantation on the Yellow River Delta,China

Plantations of woody tree species play a crucial role in ecological security along coastal zones.Understanding energy partitioning and evapotranspiration can reveal land–atmosphere interaction processes.We investigated energy fluxes,evapotranspiration,and their related biophysical factors using eddy covariance techniques in a black locust(Robinia pseudoacacia L.)plantation in 2016,2018,and 2019 on the Yellow River Delta.Downward longwave radiation offsets 84–85%of upward longwave radiation;upward shortwave radiation accounted for 12–13%of downward shortwave radiation.The ratio of net radiation to downward radiation was 18–19%over the three years.During the growing season,latent heat flux was the largest component of net radiation;during the dormant season,the sensible heat flux was the dominant component of net radiation.The seasonal variation in daily evapotranspiration was mainly controlled by net radiation,air temperature,vapor pressure deficit,and leaf area index.Black locust phenology influenced daily evapotranspiration variations,and evapotranspiration was greater under sea winds than under land winds because soil water content at 10-cm depth was greater under sea winds during the day.Seasonal patterns of daily evaporative fraction,Bowen ratio,crop coefficient,Priestley–Taylor coefficient,surface conductance,and decoupling coefficient were mainly controlled by leaf area index.The threshold value of daily surface conductance was approximately 8 mm sover the plantation.

Mini review:Application of the somatic embryogenesis technique in conifer species

The somatic embryogenesis(SE)process is better suited to large-scale production and automation than other clonal propagation methods such as the rooting of cuttings.SE is becoming a key technique to promote the asexual industrialization of conifers.Furthermore,somatic embryos are an ideal material to study the molecular mechanism of conifer embryo development,as the processes of somatic and zygotic embryo development are very similar.This brief review introduces the culturing techniques of the SE process in conifers and outlines the progress and deficiencies in conifer SE research.Emphasis is placed on the patterning formation of conifer somatic embryos.