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Applications of a Single Molecule Theory of Protein Dynamics
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作者 Yi Fang 《Journal of Biosciences and Medicines》 2024年第6期311-335,共25页
A single molecule theory for protein dynamics has been developed since 2012. It consists of the concepts of conformational Gibbs free energy function (CGF) and single molecule thermodynamic hypothesis (STH) that claim... A single molecule theory for protein dynamics has been developed since 2012. It consists of the concepts of conformational Gibbs free energy function (CGF) and single molecule thermodynamic hypothesis (STH) that claims that all stable conformations are (local or global) minimizers of CGF. These are enough to give a unified explanations and mechanisms to many aspects of protein dynamics such as protein folding;allostery;denaturation;and intrinsically disordered proteins. Formulas of CGF in water environment had been derived via quantum statistics. Applications of them to soluble proteins are: docking Gibbs free energy difference formula and a practical way to search better docking site;single molecule binding affinity;predicting and explaining why structures of a monomeric globular protein looks like a globule and is tightly packed with a hydrophobic core;a representation of the hydrophobic effect;and a wholistic view to structures of water soluble proteins. 展开更多
关键词 FOLDING DENATURATION BINDING Post-Binding Deformation ALLOSTERY Dynamic Second Law of Thermodynamics
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THE LAW OF THE ITERATED LOGARITHM FOR SPATIAL AVERAGES OF THE STOCHASTIC HEAT EQUATION
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作者 李精玉 张勇 《Acta Mathematica Scientia》 SCIE CSCD 2023年第2期907-918,共12页
Let u(t,x)be the solution to the one-dimensional nonlinear stochastic heat equation driven by space-time white noise with u(0,x)=1 for all x∈R.In this paper,we prove the law of the iterated logarithm(LIL for short)an... Let u(t,x)be the solution to the one-dimensional nonlinear stochastic heat equation driven by space-time white noise with u(0,x)=1 for all x∈R.In this paper,we prove the law of the iterated logarithm(LIL for short)and the functional LIL for a linear additive functional of the form∫[0,R]u(t,x)dx and the nonlinear additive functionals of the form∫[0,R]g(u(t,x))dx,where g:R→R is nonrandom and Lipschitz continuous,as R→∞for fixed t>0,using the localization argument. 展开更多
关键词 law of the iterated logarithm stochastic heat equation Malliavin calculus
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NADARAYA-WATSON ESTIMATORS FOR REFLECTED STOCHASTIC PROCESSES
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作者 韩月才 张丁文 《Acta Mathematica Scientia》 SCIE CSCD 2024年第1期143-160,共18页
We study the Nadaraya-Watson estimators for the drift function of two-sided reflected stochastic differential equations.The estimates,based on either the continuously observed process or the discretely observed proces... We study the Nadaraya-Watson estimators for the drift function of two-sided reflected stochastic differential equations.The estimates,based on either the continuously observed process or the discretely observed process,are considered.Under certain conditions,we prove the strong consistency and the asymptotic normality of the two estimators.Our method is also suitable for one-sided reflected stochastic differential equations.Simulation results demonstrate that the performance of our estimator is superior to that of the estimator proposed by Cholaquidis et al.(Stat Sin,2021,31:29-51).Several real data sets of the currency exchange rate are used to illustrate our proposed methodology. 展开更多
关键词 reflected stochastic differential equation discretely observed process continuously observed process Nadaraya-Watson estimator asymptotic behavior
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Acellular allogeneic nerve grafting combined with bone marrow mesenchymal stem cell transplantation for the repair of long-segment sciatic nerve defects:biomechanics and validation of mathematical models 被引量:8
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作者 Ya-jun Li Bao-lin Zhao +2 位作者 Hao-ze Lv Zhi-gang Qin Min Luo 《Neural Regeneration Research》 SCIE CAS CSCD 2016年第8期1322-1326,共5页
We hypothesized that a chemically extracted acellular allogeneic nerve graft used in combination with bone marrow mesenchymal stem cell transplantation would be an effective treatment for long-segment sciatic nerve de... We hypothesized that a chemically extracted acellular allogeneic nerve graft used in combination with bone marrow mesenchymal stem cell transplantation would be an effective treatment for long-segment sciatic nerve defects.To test this,we established rabbit models of 30 mm sciatic nerve defects,and treated them using either an autograft or a chemically decellularized allogeneic nerve graft with or without simultaneous transplantation of bone marrow mesenchymal stem cells.We compared the tensile properties,electrophysiological function and morphology of the damaged nerve in each group.Sciatic nerves repaired by the allogeneic nerve graft combined with stem cell transplantation showed better recovery than those repaired by the acellular allogeneic nerve graft alone,and produced similar results to those observed with the autograft.These findings confirm that a chemically extracted acellular allogeneic nerve graft combined with transplantation of bone marrow mesenchymal stem cells is an effective method of repairing long-segment sciatic nerve defects. 展开更多
关键词 nerve regeneration chemically extracted acellular allogeneic nerve graft AUTOGRAFT bone marrow mesenchymal stem cells sciatic nerve defects BIOMECHANICS ELECTROPHYSIOLOGY morphology neural regeneration
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A Family of Fifth-order Iterative Methods for Solving Nonlinear Equations 被引量:4
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作者 Liu Tian-Bao Cai Hua Li Yong 《Communications in Mathematical Research》 CSCD 2013年第3期255-260,共6页
In this paper, we present and analyze a family of fifth-order iterative methods free from second derivative for solving nonlinear equations. It is established that the family of iterative methods has convergence order... In this paper, we present and analyze a family of fifth-order iterative methods free from second derivative for solving nonlinear equations. It is established that the family of iterative methods has convergence order five. Numerical examples show that the new methods are comparable with the well known existing methods and give better results in many aspects. 展开更多
关键词 Newton's method iterative method nonlinear equation order of convergence
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On the Existence of Time-periodic Solution to the Compressible Heat-conducting Navier-Stokes Equations 被引量:2
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作者 Cheng Ming Li Yong 《Communications in Mathematical Research》 CSCD 2019年第1期35-56,共22页
We study in this article the compressible heat-conducting Navier-Stokes equations in periodic domain driven by a time-periodic external force. The existence of the strong time-periodic solution is established by a new... We study in this article the compressible heat-conducting Navier-Stokes equations in periodic domain driven by a time-periodic external force. The existence of the strong time-periodic solution is established by a new approach. First, we reformulate the system and consider some decay estimates of the linearized system.Under some smallness and symmetry assumptions on the external force, the existence of the time-periodic solution of the linearized system is then identi?ed as the ?xed point of a Poincare′ map which is obtained by the Tychonoff ?xed point theorem.Although the Tychonoff ?xed point theorem cannot directly ensure the uniqueness,but we could construct a set-valued function, the ?xed point of which is the timeperiodic solution of the original system. At last, the existence of the ?xed point is obtained by the Kakutani ?xed point theorem. In addition, the uniqueness of timeperiodic solution is also studied. 展开更多
关键词 non-isentropic COMPRESSIBLE fluid strong solution time period fixed point theorem
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Certain Pair of Derivations on a Triangular Algebra 被引量:2
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作者 GUO YING LI XIA +1 位作者 MA JING Du Xian-kun 《Communications in Mathematical Research》 CSCD 2014年第3期265-272,共8页
By using properties of triangular algebra, we prove that if derivations D and G on a triangular algebra T satisfy certain generalized identities, then both D and G are zero mappings. As a corollary we get that if D an... By using properties of triangular algebra, we prove that if derivations D and G on a triangular algebra T satisfy certain generalized identities, then both D and G are zero mappings. As a corollary we get that if D and G are cocentralizing on T, then both D and G are zero mappings. 展开更多
关键词 triangular algebra DERIVATION cocentralizing the Engel condition
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Generalized Extended tanh-function Method for Traveling Wave Solutions of Nonlinear Physical Equations 被引量:6
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作者 CHANG JING GAO YI-XIAN AND CAI HUA 《Communications in Mathematical Research》 CSCD 2014年第1期60-70,共11页
In this paper, the generalized extended tanh-function method is used for constructing the traveling wave solutions of nonlinear evolution equations. We choose Fisher's equation, the nonlinear schr&#168;odinger equat... In this paper, the generalized extended tanh-function method is used for constructing the traveling wave solutions of nonlinear evolution equations. We choose Fisher's equation, the nonlinear schr&#168;odinger equation to illustrate the validity and ad-vantages of the method. Many new and more general traveling wave solutions are obtained. Furthermore, this method can also be applied to other nonlinear equations in physics. 展开更多
关键词 generalized tanh-function method nonlinear Schrodinger equation Fisher's equation
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The Factorization Method to Solve a Class of Inverse Potential Scattering Problems for Schrdinger Equations 被引量:2
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作者 LI YUAN MA FU-MING 《Communications in Mathematical Research》 CSCD 2010年第4期321-336,共16页
This paper is concerned with the inverse scattering problems for Schrdinger equations with compactly supported potentials.For purpose of reconstructing the support of the potential,we derive a factorization of the sca... This paper is concerned with the inverse scattering problems for Schrdinger equations with compactly supported potentials.For purpose of reconstructing the support of the potential,we derive a factorization of the scattering amplitude operator A and prove that the ranges of (A* A) ^1/4 and G which maps more general incident fields than plane waves into the scattering amplitude coincide.As an application we characterize the support of the potential using only the spectral data of the operator A. 展开更多
关键词 factorization method inverse scattering Schrdinger equation interior transmission problem
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Global Existence and Blow-up of Solutions to Multi-dimensional (n ≤ 5) Viscous Cahn-Hilliard Equation 被引量:5
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作者 黄锐 尹景学 +1 位作者 李颖花 王春朋 《Northeastern Mathematical Journal》 CSCD 2005年第3期371-378,共8页
In this paper we consider the viscous Cahn-Hilliard equation with spatial dimension n ≤ 5, and established global existence of weak solutions for small initial value and blow-up of solutions for any nontrivial initia... In this paper we consider the viscous Cahn-Hilliard equation with spatial dimension n ≤ 5, and established global existence of weak solutions for small initial value and blow-up of solutions for any nontrivial initial data. 展开更多
关键词 viscous Cahn-Hilliard equation EXISTENCE BLOW-UP
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PRECISE MOMENT ASYMPTOTICS FOR THE STOCHASTIC HEAT EQUATION OF A TIME-DERIVATIVE GAUSSIAN NOISE 被引量:1
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作者 Heyu LI Xia CHEN 《Acta Mathematica Scientia》 SCIE CSCD 2019年第3期629-644,共16页
This article establishes the precise asymptotics Eu^m(t, x)(t → ∞ or m → ∞) for the stochastic heat equation ?u/?t(t, x) =1/2?u(t, x) + u(t, x)(t, x)?W/?t(t, x) with the time-derivative Gaussian noise W?/?t(t, x) ... This article establishes the precise asymptotics Eu^m(t, x)(t → ∞ or m → ∞) for the stochastic heat equation ?u/?t(t, x) =1/2?u(t, x) + u(t, x)(t, x)?W/?t(t, x) with the time-derivative Gaussian noise W?/?t(t, x) that is fractional in time and homogeneous in space. 展开更多
关键词 STO chastic HEA t equation t ime-deriva tive Gaussian noise BROWNIAN MOT ion Feynman-Kac representation Schilder's large deviation
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Statistical Inference for the Parameter of Rayleigh Distribution Based on Progressively Type-I Interval Censored Sample 被引量:1
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作者 Abdalroof M S Zhao Zhi-wen Wang De-hui 《Communications in Mathematical Research》 CSCD 2015年第2期108-118,共11页
In this paper, the estimation of parameters based on a progressively type-I interval censored sample from a Rayleigh distribution is studied. Different methods of estimation are discussed. They include mid-point appro... In this paper, the estimation of parameters based on a progressively type-I interval censored sample from a Rayleigh distribution is studied. Different methods of estimation are discussed. They include mid-point approximation estima- tor, the maximum likelihood estimator, moment estimator, Bayes estimator, sampling adjustment moment estimator, sampling adjustment maximum likelihood estimator and estimator based on percentile. The estimation procedures are discussed in details and compared via Monte Carlo simulations in terms of their biases. 展开更多
关键词 EM algorithm maximum likelihood estimation moment method Bayesestimation Rayleigh distribution
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Bayesian Estimation for the Order of INAR(q)Model 被引量:1
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作者 MIAO GUAN-HONG WANG DE-HUI 《Communications in Mathematical Research》 CSCD 2016年第4期325-331,共7页
In this paper, we consider the problem of determining the order ofINAR(Q) model on the basis of the Bayesian estimation theory. The Bayesian es-timator for the order is given with respect to a squared-error loss fu... In this paper, we consider the problem of determining the order ofINAR(Q) model on the basis of the Bayesian estimation theory. The Bayesian es-timator for the order is given with respect to a squared-error loss function. The consistency of the estimator is discussed. The results of a simulation study for the estimation method are presented. 展开更多
关键词 INAR(Q) model Bayesian estimation squared-error loss function con-sistency
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Convergence Properties of Generalized Fourier Series on a Parallel Hexagon Domain 被引量:1
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作者 WANG SHU-YUNI LIANG XUEoZHANG +1 位作者 FU YAO SUN XUE-NAN 《Communications in Mathematical Research》 CSCD 2009年第2期104-114,共11页
A new Rogosinski-type kernel function is constructed using kernel function of partial sums Sn(f; t) of generalized Fourier series on a parallel hexagon domain Ω associating with threedirection partition. We prove t... A new Rogosinski-type kernel function is constructed using kernel function of partial sums Sn(f; t) of generalized Fourier series on a parallel hexagon domain Ω associating with threedirection partition. We prove that an operator Wn(f; t) with the new kernel function converges uniformly to any continuous function f(t) ∈ Cn(Ω) (the space of all continuous functions with period Ω) on Ω. Moreover, the convergence order of the operator is presented for the smooth approached function. 展开更多
关键词 three-direction coordinate kernel function generalized Fourier series uniform convergence
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Spectral Method for a Class of Cahn-Hilliard Equation with Nonconstant Mobility 被引量:1
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作者 CHAI SHI-MIN Zou YONG-KUI GONG CHENG-CHUN 《Communications in Mathematical Research》 CSCD 2009年第1期9-18,共10页
In this paper, we propose and analyze a full-discretization spectral approximation for a class of Cahn-Hilliard equation with nonconstant mobility. Convergenee analysis and error estimates are presented and numerical ... In this paper, we propose and analyze a full-discretization spectral approximation for a class of Cahn-Hilliard equation with nonconstant mobility. Convergenee analysis and error estimates are presented and numerical experiments are carried out. 展开更多
关键词 Cahn-Hilliard equation spectral method error estimate
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Surface Reconstruction of 3D Scattered Data with Radial Basis Functions 被引量:1
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作者 Du XIN-WEI YANG XIAO-YING LIANG XUE-ZHANG 《Communications in Mathematical Research》 CSCD 2010年第2期183-192,共10页
We use Radial Basis Functions (RBFs) to reconstruct smooth surfaces from 3D scattered data. An object's surface is defined implicitly as the zero set of an RBF fitted to the given surface data. We propose improveme... We use Radial Basis Functions (RBFs) to reconstruct smooth surfaces from 3D scattered data. An object's surface is defined implicitly as the zero set of an RBF fitted to the given surface data. We propose improvements on the methods of surface reconstruction with radial basis functions. A sparse approximation set of scattered data is constructed by reducing the number of interpolating points on the surface. We present an adaptive method for finding the off-surface normal points. The order of the equation decreases greatly as the number of the off-surface constraints reduces gradually. Experimental results are provided to illustrate that the proposed method is robust and may draw beautiful graphics. 展开更多
关键词 radial basis function scattered data implicit surface surface reconstruction
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Eigenvalue Problem of Doubly Stochastic Hamiltonian Systems with Boundary Conditions 被引量:1
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作者 HAN YUE-CAI MA YONG 《Communications in Mathematical Research》 CSCD 2009年第1期30-36,共7页
In this paper, we investigate the eigenvalue problem of forward-backward doubly stochastic dii^erential equations with boundary value conditions. We show that this problem can be represented as an eigenvalue problem o... In this paper, we investigate the eigenvalue problem of forward-backward doubly stochastic dii^erential equations with boundary value conditions. We show that this problem can be represented as an eigenvalue problem of a bounded continuous compact operator. Hence using the famous Hilbert-Schmidt spectrum theory, we can characterize the eigenvalues exactly. 展开更多
关键词 doubly stochastic Hamiltonian system eigenvalue problem spectrum theory
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Existence and Uniqueness of Positive Solutions for a System of Multi-order Fractional Differential Equations 被引量:3
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作者 Dai Qun Li Hui-lai Liu Su-li 《Communications in Mathematical Research》 CSCD 2016年第3期249-258,共10页
In this paper, we study a class of ruin problems, in which premiums and claims are dependent. Under the assumption that premium income is a stochastic process, we raise the model that premiums and claims are dependent... In this paper, we study a class of ruin problems, in which premiums and claims are dependent. Under the assumption that premium income is a stochastic process, we raise the model that premiums and claims are dependent, give its numerical characteristics and the ruin probability of the individual risk model in the surplus process. In addition, we promote the number of insurance policies to a Poisson process with parameter λ, using martingale methods to obtain the upper bound of the ultimate ruin probability. 展开更多
关键词 ruin probability dependent structure individual risk model Poisson process
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A Class of Singular Nonlinear Diffusion Problem 被引量:1
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作者 姚正安 周文书 尹景学 《Northeastern Mathematical Journal》 CSCD 2006年第1期1-4,共4页
singular diffusion equation, existence, uniqueness, blow-up, asymptotic behavior
关键词 singular diffusion equation EXISTENCE UNIQUENESS BLOW-UP asymptotic behavior
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Controllability of Nonlinear Neutral Evolution Equations with Nonlocal Conditions 被引量:1
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作者 刘明姬 吕悦 吕显瑞 《Northeastern Mathematical Journal》 CSCD 2007年第2期115-122,共8页
In this paper, we establish sufficient conditions for the controllability of nonlinear neutral evolution equations with nonlocal conditions. The result is obtained by using Krasnoselski-Schaefer type fixed point theorem.
关键词 nonlocal condition nonlinear neutral evolution equation mild solution Krasnoselski-Schaefer fixed point
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