t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Tra...t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Traditional classification of coelomycetes was previously based on morphology,such as the shape of conidiomata and mode of conidiogenesis,while it was treated as a distinct group i.e.Deuteromycotina.Sequence based taxonomic studies has been used to accommodate asexual fungi in a natural classification system,resolve generic boundaries of polyphyletic genera and species complexes,as well as establish asexual-sexual links.Nevertheless,most of genera lack sequence data,thus,morphology based identification is still important when introducing new genera or species.In this paper we illustrate,describe,and provide taxonomic notes for 235 dematiaceous coelomycetous genera,including five new genera viz.Apiculospora,Didymellocamarosporium,Melanocamarosporium,Melnikia and Paulkirkia.Phylogenetic analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes,Leotiomycetes and Sordariomycetes.One-hundred and fifty-two(65%)of genera have sequence data,thus,their taxonomic placement in a natural classification system,is listed as an outline.However,83 genera still lack sequence data,hence,they are treated as Ascomycota,genera incertae sedis.In addition,separate analyses are provided where better taxonomic resolution is needed.展开更多
Knowledge of the relationships and thus the classification of fungi,has developed rapidly with increasingly widespread use of molecular techniques,over the past 10–15 years,and continues to accelerate.Several genera ...Knowledge of the relationships and thus the classification of fungi,has developed rapidly with increasingly widespread use of molecular techniques,over the past 10–15 years,and continues to accelerate.Several genera have been found to be polyphyletic,and their generic concepts have subsequently been emended.New names have thus been introduced for species which are phylogenetically distinct from the type species of particular genera.The ending of the separate naming of morphs of the same species in 2011,has also caused changes in fungal generic names.In order to facilitate access to all important changes,it was desirable to compile these in a single document.The present article provides a list of generic names of Ascomycota(approximately 6500 accepted names published to the end of 2016),including those which are lichen-forming.Notes and summaries of the changes since the last edition of‘Ainsworth&Bisby’s Dictionary of the Fungi’in 2008 are provided.The notes include the number of accepted species,classification,type species(with location of the type material),culture availability,life-styles,distribution,and selected publications that have appeared since 2008.This work is intended to provide the foundation for updating the ascomycete component of the"Without prejudice list of generic names of Fungi"published in 2013,which will be developed into a list of protected generic names.This will be subjected to the XIXth International Botanical Congress in Shenzhen in July 2017 agreeing to a modification in the rules relating to protected lists,and scrutiny by procedures determined by the Nomenclature Committee for Fungi(NCF).The previously invalidly published generic names Barriopsis,Collophora(as Collophorina),Cryomyces,Dematiopleospora,Heterospora(as Heterosporicola),Lithophila,Palmomyces(as Palmaria)and Saxomyces are validated,as are two previously invalid family names,Bartaliniaceae and Wiesneriomycetaceae.Four species of Lalaria,which were invalidly published are transferred to Taphrina and validated as new combinations.Catenomycopsis Tibell&Constant.is reduced under Chaenothecopsis Vain.,while Dichomera Cooke is reduced under Botryosphaeria Ces.&De Not.(Art.59).展开更多
基金the International Highly Cited Research Group(IHCRRGP#14-205)Nalin N.Wijayawardene would like to thank P.M.Kirk,V.A.Mel’nik,Buddhika Dilhan,Dmitrii Shabunin,Manjari Dissanayake and Lesley Ragab for being helpful to gather old literature.Kevin D.Hyde is grateful to the Chinese Academy of Sciences,project number 2013T2S0030+6 种基金for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany,research grant from the Biodiversity Research and Training Program(BRT R253012)The Thailand Research Fund(BRG 5280002).Alan J.L.Phillips thanks Mae Fah Luang University for a Visiting Professorship during the tenure of which this paper was finalised.Yong Wang would like to thank The International Scientific Cooperated Project of Guizhou Province(No[2013]7004).Rungtiwa Phookamsak thanks the Royal Golden Jubilee Ph.D.Program(PHD/0090/2551).Erio Camporesi is grateful to Giancarlo Lombardi,Sergio Montanari and Gigi Stagioni for their help in identifying host plants of fresh collections.K.Tanaka would like to thank the Japan Society for the Promotion of Science(JSPS,25440199 and 26291084)Hirosaki University Grant for Exploratory Research by Young Scientists and Newly-appointed Scientists for financial support.Yong Wang thanks Yong-Cheng Long,Prof.De-Gang Zhao and Prof.Zhuo Chen for their help in sequencing and suggestions in molecular experiments.We would like to thank MFU grant No.56101020032 for funding to study the taxonomy and phylogeny of Dothideomycetes.The authors also wish to acknowledge Saranyaphat Boonmee,Chayanard Phukhamsakda and Qing Tian.Ishani D.Goonasekara wishes to acknowledge Liu Ende,Assistant Curator,Herbarium,Kunming Institute of Botany,Chinese Academy of Sciences(KUN),Kunming,China,Wu HaiXia and staff of International Fungal Research and Development Centre(IFRD),Key Laboratory of Resource Insect Cultivation&Utilization State Forestry Administration,The Research Institute of Resource Insects,Chinese Academy of Forestry Kunming 650224,PR China and Danushka S.Tennakoon for their assistance with herbarium material.
文摘t Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e.conidiomata.Coelomycetes comprise about,1000 genera and 7000 species,which can be endophytic,pathogenic or saprobic.Traditional classification of coelomycetes was previously based on morphology,such as the shape of conidiomata and mode of conidiogenesis,while it was treated as a distinct group i.e.Deuteromycotina.Sequence based taxonomic studies has been used to accommodate asexual fungi in a natural classification system,resolve generic boundaries of polyphyletic genera and species complexes,as well as establish asexual-sexual links.Nevertheless,most of genera lack sequence data,thus,morphology based identification is still important when introducing new genera or species.In this paper we illustrate,describe,and provide taxonomic notes for 235 dematiaceous coelomycetous genera,including five new genera viz.Apiculospora,Didymellocamarosporium,Melanocamarosporium,Melnikia and Paulkirkia.Phylogenetic analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes,Leotiomycetes and Sordariomycetes.One-hundred and fifty-two(65%)of genera have sequence data,thus,their taxonomic placement in a natural classification system,is listed as an outline.However,83 genera still lack sequence data,hence,they are treated as Ascomycota,genera incertae sedis.In addition,separate analyses are provided where better taxonomic resolution is needed.
基金Acknowledgements Nalin Wijayawardene would like to thank Lechat Christian,Yuanpin Xiao,Danushka Sandaruwan,Paul Mungai,Huang Zhang,Ishani Goonasekara,Chada Norphanphoun,Ishara Manawasingha,Rajesh Jeewon,Thilini Chethana and Hasini Ekanayaka for their assistances and suggestions.We would like to thank Mark Stadler for his help to check names in Xylariales.Nalin Wijayawardene and Pedro Crous thank Ulrike Damm for her comments and suggestions for validating several names.K.D.Hyde thanks The Chinese Academy of Sciences,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany.K.D.Hyde and Monika C.Dayarathne would like to thank the Thailand Research Fund(TRF)grant no RSA5980068 entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans,National Research Council of Thailand(NRCT)entitled Diseases of mangrove trees and maintenance of good forestry practice(Grant number:60201000201)Mae Fah Luang University grant"Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae"(Grant number:592010200112)+9 种基金Hugo Madrid was funded by Comisio´n Nacional de Investigacio´n Cientı´fica y Tecnolo´gica(CONICYT)Fondo Nacional de Desarrollo Cientı´fico y Tecnolo´gico(FONDECYT),Chile,project no.11140562."Rafael F.Castan˜eda-Ruiz is grateful to the Organizacio´n Superior de Direccio´n Empresarial,Grupo Agrı´cola,(OSDE)from the Cuban Ministry of Agriculture and"Programa de Salud Animal y Vegetal",project P131LH003033.Dong Qin Dai would like to thank the Key Laboratory of Yunnan Province Universities of the Diversity and Ecological Adaptive Evolution for Animals and plants on Yun-Gui Plateau for the support.Ka-Lai Pang thanks Ministry of Science and Technology,Taiwan for financial support(105-2621-B-019-002-)Guo Zhu Zhao was funded by the National Natural Science Foundation of China(No.31570019)Mingkwan Doilom acknowledges the Royal Golden Jubilee Ph.D.Program(PHD./0072/2553 in 4.S.M.F./53/A.2.K.Tanaka would like to thank the Japan Society for the Promotion of Science(JSPS26291084 and 16K07474)Walter P.Pfliegler was supported through the U´NKP-16-4-IV New National Excellence Program of the Hungarian Ministry of Human Capacities.Samantha C.Karunarathna thanks Yunnan Provincial Department of Human Resources and Social Security funded postdoctoral project(number 179122)for supporting his postdoctoral research study.The authors extend their appreciation to the International Scientific Partnership Program ISPP at King Saud University for funding this research work through ISPP#0089.KC Rajeshkumar thanks SERB,DST,Government of India for providing financial support under the project YSS/2015/001590Dr.K.M.Paknikar,Director,ARI for providing the facility.Mats Wedin thanks the Swedish Research Council,grants VR 621-2012-3990VR 2016-03589.Alan JL Phillips acknowledges the support from Biosystems and Integrative Sciences Institute(BioISI,FCT/UID/Multi/04046/2013)L.Selbmann,L.Zucconi and S.Onofri thank the Italian National Program for Antarctic Researches(PNRA)for the financial support.The Italian National Antarctic Museum(MNA)is acknowledged for supporting the Mycological Section and the Culture Collection of Fungi from Extreme Environments(CCFEE).
文摘Knowledge of the relationships and thus the classification of fungi,has developed rapidly with increasingly widespread use of molecular techniques,over the past 10–15 years,and continues to accelerate.Several genera have been found to be polyphyletic,and their generic concepts have subsequently been emended.New names have thus been introduced for species which are phylogenetically distinct from the type species of particular genera.The ending of the separate naming of morphs of the same species in 2011,has also caused changes in fungal generic names.In order to facilitate access to all important changes,it was desirable to compile these in a single document.The present article provides a list of generic names of Ascomycota(approximately 6500 accepted names published to the end of 2016),including those which are lichen-forming.Notes and summaries of the changes since the last edition of‘Ainsworth&Bisby’s Dictionary of the Fungi’in 2008 are provided.The notes include the number of accepted species,classification,type species(with location of the type material),culture availability,life-styles,distribution,and selected publications that have appeared since 2008.This work is intended to provide the foundation for updating the ascomycete component of the"Without prejudice list of generic names of Fungi"published in 2013,which will be developed into a list of protected generic names.This will be subjected to the XIXth International Botanical Congress in Shenzhen in July 2017 agreeing to a modification in the rules relating to protected lists,and scrutiny by procedures determined by the Nomenclature Committee for Fungi(NCF).The previously invalidly published generic names Barriopsis,Collophora(as Collophorina),Cryomyces,Dematiopleospora,Heterospora(as Heterosporicola),Lithophila,Palmomyces(as Palmaria)and Saxomyces are validated,as are two previously invalid family names,Bartaliniaceae and Wiesneriomycetaceae.Four species of Lalaria,which were invalidly published are transferred to Taphrina and validated as new combinations.Catenomycopsis Tibell&Constant.is reduced under Chaenothecopsis Vain.,while Dichomera Cooke is reduced under Botryosphaeria Ces.&De Not.(Art.59).