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BioNano Genome Map Resource for Oryza sativa ssp.japonica and indica and Its Application in Rice Genome Sequence Correction and Gap Filling 被引量:4
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作者 Ping Chen Xinyun Jing +5 位作者 Baosheng Liao Yan Zhu Jiang Xu Renyi Liu Yinhong Zhao Xuan Li 《Molecular Plant》 SCIE CAS CSCD 2017年第6期895-898,共4页
Dear Editor As one of the most important staple food crops worldwide, rice is among the first plant species whose genomes were sequenced. The reference genome for Oryza sativa ssp. japonica variety Nipponbare was comp... Dear Editor As one of the most important staple food crops worldwide, rice is among the first plant species whose genomes were sequenced. The reference genome for Oryza sativa ssp. japonica variety Nipponbare was completed by the International Rice Genome Sequencing Project (IRGSP) using a bacterial artificial chromosome (BAC)-based cloning strategy (Matsumoto et al., 2005). 展开更多
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Active DNA demethylation in plants:20 years of discovery and beyond
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作者 Heng Zhang Zhizhong Gong Jian-Kang Zhu 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2022年第12期2217-2239,共23页
Maintaining proper DNA methylation levels in the genome requires active demethylation of DNA.However,removing the methyl group from a modified cytosine is chemically difficult and therefore,the underlying mechanism of... Maintaining proper DNA methylation levels in the genome requires active demethylation of DNA.However,removing the methyl group from a modified cytosine is chemically difficult and therefore,the underlying mechanism of demethylation had remained unclear for many years.The discovery of the first eukaryotic DNA demethylase,Arabidopsis thaliana REPRESSOR OF SILENCING 1(ROS1),led to elucidation of the 5-methylcytosine base excision repair mechanism of active DNA demethylation.In the 20 years since ROS1 was discovered,our understanding of this active DNA demethylation pathway,as well as its regulation and biological functions in plants,has greatly expanded.These exciting developments have laid the groundwork for further dissecting the regulatory mechanisms of active DNA demethylation,with potential applications in epigenome editing to facilitate crop breeding and gene therapy. 展开更多
关键词 abiotic stress response base excision repair DNA demethylation DNA methylation histone modification plant growth and development plant microbe interaction
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How long should a kiss last between a kinase and its substrate?
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作者 Chen Zhu Liwen Fu +1 位作者 Yan Xiong Pengcheng Wang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2022年第4期789-791,共3页
The molecular mechanisms underlying the trade-off between plant growth and responses to the ever-changing environment are poorly understood.We previously revealed a phosphorylation-based regulatory loop between the pl... The molecular mechanisms underlying the trade-off between plant growth and responses to the ever-changing environment are poorly understood.We previously revealed a phosphorylation-based regulatory loop between the plant stress hormone abscisic acid(ABA)and the central growth regulator Target of Rapamycin(TOR)(Wang et al.,2018).Under normal conditions,TOR kinase phosphorylates ABA receptors(PYR1/PYL/RCARs)to abolish their ABA binding ability,thereby preventing stress signaling activation and promoting plant growth. 展开更多
关键词 plant PHOSPHORYLATION thereby
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