Structure and diversity dynamics of microbial communities at day and night:investigation of meromictic Lake Doroninskoe,Transbaikalia,Russia

Extreme environmental conditions are key factors in the formation of the structure and diversity of microbial communities. In meromictic ecosystems, extreme conditions and a stable stratification of physical, chemical and biological parameters lead to diversity and heterogeneity of microenvironments. Lake Doroninskoe is located in an extreme geographical area and diff ers from other known meromictic reservoirs of the world by a low level of illumination in the chemocline and a rare type of alkaline water in sedimentary rocks formed by evaporative concentration. To understand the key factors that shape the composition and structure of the microbial community, the macro-and micro-variations in space and time are of great importance. We investigated the short-term dynamics of the structure and diversity of microbial communities of the meromictic soda lake, Lake Doroninskoe, at day and night using highthroughput sequencing and bioinformatics. Metagenomic analysis of 16 S rRNA gene amplicons showed that the microbial communities had a high taxonomic diversity both at day and night. Sixteen bacterial and three archaeal phyla were identified. Proteobacteria were dominant and comprised 75% during the day, increasing to 90% at night. Metabolically stable denitrifying bacteria that were able to use a variety of alternative electron acceptors and electron donors were prevalent in Lake Doroninskoe. They belonged to the families Enterobacteriaceae(class Gammaproteobacteria) and Alcaligenaceae(class Betaproteobacteria). Statistically significant differences between day and night microbial communities were found. During the day, the microbial community was the most diverse. We discuss the peculiarities of the underexplored shortterm dynamics of the structure and diversity of the microbial communities of the meromictic soda Lake Doroninskoe, and propose topics for prospective studies.

Genetic variation of wood tracheid traits and their relationships with growth and wood density in clones of Pinus tabuliformis

To improve wood quality for pulpwood industries, it is important to examine not only wood density but also its components, especially tracheid characteristics. We studied genetic variations in the following tracheid traits by earlywood （EW） and latewood （LW）： tracheid length （TL）, double wall thickness （WT）, radial lumen diameter （R_D1）, tangential lumen diameter （T_D1）, radial central diameter （R_D2）, and tangential central diameter （T_D2）. We also studied the relationship with the following growth traits： diameter at breast height （DBH）, height （H）, crown breadth south-north axis （NSC）, crown breadth east-west axis （EWC）, ring width （RW）, latewood percentage （LWP）, and wood density （WD）. All sample materials were collected from a 33-year old clonal seed orchard of Pinus tabuliformis Carr. Genetic variation among clones was moderate for all tracheid traits, 9.49-26.03%. Clones significantly affected WT, R_D1, R_D2, T_D1, T_D2, and the two ratios WT/R_D1 and TL/T_D2 in EW but had no effects in LW. Clones significantly affected TL in LW but had no effects in EW. H2/C was higher in LW （0.50） than in EW （0.20） for TL, while H 2/C was higher in EW （0.27-0.46） for other tracheid traits and the two ratios （TL/T_D2 and WT/R_D1） than in EW （0.06-0.22）. WD and TL were significantly positively correlated, but WT and TL were negatively correlated both at individual and clone levels; all tracheid diameters and the four ratio values （EW_WT/ R_D1, LW WT/R_D1, EW_TL/T_D2 and LW_TL/ T_D2）, were strongly positively correlated with DBH, H, NSC, WEC and RW, and strongly negatively correlated with WD both at individual and clone levels. The most important variables for predicting WD were LW_TL, EW_WT and R_D1 in both EW and LW （r2= 0.22）. Selecting the top 10% of the clones by DBH would improve DBH growth by 12.19% （wood density was reduced by 0.14%） and produced similar responses between EW and LW for all tracheid traits： a reduction of 0.94 and 3.69% in tracheid length and increases in tracheid diameters （from 0.36 to 5.24%） and double wall thickness （0.07 and 0.87%）. The two ratios WT/R_D1 and TL/T_D2 across tissues （EW and LW） declined 0.59 and 4.56%, respectively. The decreased tracheid length and the ratio between tracheid length and diameter is disadvantageous for pulp production. The unfavorable relationship of tracheid traits with wood density indicate that multiple trait selection using optimal economic weights and optimal breeding strategies are recommended for the current longterm breeding program for P. tabuliformis.

Sensitivity Analysis of Computations of the Vapor-Liquid Equilibria of Methane + Methanol or Glycols at Gas Hydrate Formation Conditions

The Soave-Redlich-Kwong (SRK-EOS) and Peng-Robinson (PR-EOS) equations of state are used often to describe the behavior of pure substances and mixtures despite difficulties in handling substances, like water, with high polarity and hydrogen bonding. They were employed in studying the binary vapor-liquid equilibria (VLE) of methane + methanol, monoethylene glycol (MEG), and triethylene glycol (TEG). These liquids are used to inhibit the formation of gas hydrates. The investigation focused on the conditions at which methane-water clathrates can form 283.89?K to 323.56?K and 5.01?MPa to 18.48?MPa. The pressure of methane in methanol is overestimated by a factor of two by either the SRK-EOS or the PR-EOS. In the methane + MEG system, the predicted pressures for both equations of state are generally less than experimental pressure except for the highest concentration of methane in MEG calculated by the SRK-EOS. In the methane + TEG system, the predictions of both models are close and trend similarly. Because of the comparative lack of extensive experimental methane + TEG data, the similarity of the methane + TEG computed results can be used as a basis for further study of this system experimentally.

Utilization of Pyrosequencing to Monitor the Microbiome Dynamics of Probiotic Treated Poultry (<i>Gallus gallus domesticus</i>) during Downstream Poultry Processing

Antibiotic growth promoters that have been historically employed to control pathogens and increase the rate of animal development for human consumption are currently banned in many countries. Probiotics have been proposed as an alternative to control pathogenic bacteria. Traditional culture methods typically used to monitor probiotic effects on pathogens possess significant limitations such as a lack in sensitivity to detect fastidious and non-culturable bacteria, and are both time consuming and costly. Here, we tested next generation pyrosequencing technology as a streamline and economical method to monitor the effects of a probiotic on microbial communities in juvenile poultry (Gallus gallus domesticus) after exposure to several microbiological challenges and litter conditions. Seven days and repeated again at 39 days following hatching, chicks were challenged with either Salmonella enterica serovar Enteritidis, Campylobacter jejuni, or no bacteria in the presence of, or without a probiotic (i.e., Bacillus subtilis) added to the feed. Three days following each of two challenges (i.e., days 10 and 42, respectively) the microbiome distributions of the poultry caecum were characterized based on 16S rDNA analysis. Generated PCR products were analyzed by automated identification of the samples after pooling, multiplexing and sequencing. A bioinformatics pipeline was then employed to identify microbial distributions at the phylum and genus level for the treatments. In conclusion, our results demonstrated that pyrosequencing technology is a rapid, efficient and cost-effective method to monitor the effects of probiotics on the microbiome of poultry propagated in an agricultural setting.

Resin Production in Natural and Artificial Red-Cockaded Woodpecker Cavity Trees

Resin flow was measured in red-cockaded woodpecker (Picoides borealis Vieillot) clusters in longleaf pine (Pinus palustris Mill.) in the southern region of the Angelina National Forest, Texas. Resin flow (ml) at 1.4 m height over 24 hrs was measured from one 2.5 cm punch through the phloem between 0700 and 1000 hrs from March 1999 to September 2000, for a total of 9 measurements per tree. Resin was sampled in naturally active cavity trees, artificial (insert) active, natural inactive, artificial inactive and control pines (84 sample trees). Resin flow pattern was significantly different during the year, but not significantly different in the cavity tree type resin flow. Cavity trees in the 90th percentile (>33.0 ml resin in 24 hrs) were defined as super resin producing. High average resin flows in August 1999 and September 2000 indicate when to sample resin for potential cavity trees. Regression equations were produced to estimate future resin production.

Geochemical Characterization of Base Metals in Stream Water and Sediments in the Caddo Lake Watershed, Cass, Harrison and Marion Counties, Texas

The Caddo Lake watershed is located in northeastern Texas and encompasses much of Cass, Harrison, and Marion counties. The watershed is drained by major streams and tributaries flowing in an easterly direction over Eocene-aged rocks and sediments of the Wilcox and Claiborne groups, and empty into the western arm of Caddo Lake. Since 1995, Caddo Lake and some of its tributaries have been included on the State of Texas Clean Water Act 303(d) list by the Texas Commission on Environmental Quality (TCEQ) for impairment due to mercury content in edible tissue, depressed dissolved oxygen, base metal concentrations, and low pH values. The purpose of this multi-year study was to characterize base metal concentrations in stream water and sediments in the Caddo Lake watershed, and document the potential watershed transport and contribution to the impairment of Caddo Lake. Recent water (n = 58) and sediment (n = 116) sampling at 29 sites revealed copper, lead, and zinc concentrations within normal limits and below EPA actionable standards. Mercury concentrations were elevated at 21 of the 29 sampling sites, which could lead to methylation and bioavailability to organisms at all trophic level.

Role of the Americans with Disabilities Act in Parental Rights Court Cases

In this paper, media provides a means of thinking critically about the role of ADA regulations should play in parental fights for individuals with mental disabilities, specifically mental illness, developmental disabilities, and brain injuries. Congress passed the Americans with Disabilities Act more than 20 years ago to ensure the rights of individuals with disabilities, including parental rights. Title II of the ADA applies to decisions made in the courtroom and other governmental agencies, which include child custody cases and termination of parental rights. ＂Reasonable Accommodations＂ is one requirement of the ADA to make society more inclusive for individuals with disabilities, even in the realm of parenting. Under Title II, such modifications would include parenting classes, homecare assistance, support groups, community resources, and counseling. Through a critical examination of experiences as depicted through media and court case analyses of parents with mental disabilities, this paper argues that challenging the idea that individuals with disabilities cannot or should not be parents must start in the courtroom, by changing the attitudes and perceptions of judges presiding over child custody cases and termination of parental rights cases involving parents with mental disabilities.

Measuring loblolly pine crowns with drone imagery through deep learning

In modeling forest stand growth and yield,crown width,a measure for stand density,is among the parameters that allows for estimating stand timber volumes.However,accurately measuring tree crown size in the field,in particular for mature trees,is challenging.This study demonstrated a novel method of applying machine learning algorithms to aerial imagery acquired by an unmanned aerial vehicle(UAV)to identify tree crowns and their widths in two loblolly pine plantations in eastern Texas,USA.An ortho mosaic image derived from UAV-captured aerial photos was acquired for each plantation(a young stand before canopy closure,a mature stand with a closed canopy).For each site,the images were split into two subsets:one for training and one for validation purposes.Three widely used object detection methods in deep learning,the Faster region-based convolutional neural network(Faster R-CNN),You Only Look Once version 3(YOLOv3),and single shot detection(SSD),were applied to the training data,respectively.Each was used to train the model for performing crown recognition and crown extraction.Each model output was evaluated using an independent test data set.All three models were successful in detecting tree crowns with an accuracy greater than 93%,except the Faster R-CNN model that failed on the mature site.On the young site,the SSD model performed the best for crown extraction with a coefficient of determination(R^(2))of 0.92,followed by Faster R-CNN(0.88)and YOLOv3(0.62).As to the mature site,the SSD model achieved a R^(2)as high as 0.94,follow by YOLOv3(0.69).These deep leaning algorithms,in particular the SSD model,proved to be successfully in identifying tree crowns and estimating crown widths with satisfactory accuracy.For the purpose of forest inventory on loblolly pine plantations,using UAV-captured imagery paired with the SSD object detention application is a cost-effective alternative to traditional ground measurement.

Rhodes＇s Men： Class, Race, and Ethnicity in Intemational Leadership

At his death in 1902, Cecil Rhodes left an enormous amount of money to his alma mater, Oxford University to fund arguably the most recognized and prestigious scholarship in the world, the Rhodes Scholarship. Formally established one year after his passing, the grant quickly became the most famous educational award in the English-speaking world. Every year, 32 American college seniors are selected to study at Oxford University.1 Many of these elite men have returned from England to distinguish themselves in their chosen fields. Indeed the list of recipients reads like a Who＇s Who of American Leadership. Politicians such as senators J. William Fulbright and Bill Bradley, former President Bill Clinton, public policy analysts Robert Reich and George Stephanopoulos, writer Robert Penn Warren, as well as Supreme Court Justices Bryon White and David Souter, to name but a few, all achieved the status of Rhodes Scholars, a designation that has followed them thorough their respective and impressive careers （Schaeper ＆ Schaeper, 1998）. Undoubtedly, this scholarship has had an enormous impact on the individuals who have been deemed worthy of its selection. Today, selection as a Rhodes Scholar is widely considered a golden ticket to future success for its recipients.

The roles of inter- and intra-sexual selection in behavioral isolation between native and invasive pupfishes

Male-male competition and female mate choice may both play important roles in driving and maintaining reproductive isolation between species. When previously allopatric species come into secondary contact with each other due to introductions, they provide an opportunity to evaluate the identity and strength of reproductive isolating mechanisms. If reproductive isolation is not maintained, hybridization may occur. We examined how reproductive isolating mechanisms medi- ate hybridization between endemic populations of the Red River pupfish Cyprinodon rubrofluviati- lis and the recently introduced sheepshead minnow C. variegatus. In lab-based dominance trials, males of both species won the same number of competitions. However, male C. rubrofluviatilis that won competitions were more aggressive than C, variegatus winners, and more aggression was needed to win against competitor C. variagatus than allopatric C. rubrofluviatilis. Duration of fights also differed based on the relatedness of the competitor. In dichotomous mate choice trials, there were no conspecific or heterospecific preferences expressed by females of either species. Our findings that male-male aggression differs between closely and distantly related groups, but female choice does not suggest that male-male competition may be the more likely mechanism to impede gene flow in this system.

Effects of fertilization and herbicides on growth of young loblolly pine and infestations of Nantucket pine tip moth（Lepidoptera： Tortricidae）

A 2-year-old pine plantation was selected to receive treatments of fertilizers and herbicides to evaluate effects on Nantucket pine tip moth infestations and the tree growth parameters of height, diameter and volume increment. Nitrogen and phosphorus fertilizers, and hexazinone and sulfometuron methyl herbicides were used in creating six treatments： （i） control; （ii） phosphorus; （iii） nitrogen and phosphorus; （iv） phosphorus and herbicide; （v） nitrogen, phosphorus and herbicide; and （vi） herbicide. Treatments were applied in 1987 and 1988. In 1987, trees treated with nitrogen, phosphorus and herbicide had significantly greater height, diameter and volume growth than trees not receiving fertilizer treatments, but did not have significantly higher tip moth infestations than control trees. Treatments receiving phosphorus only had much lower tip moth infestation rates than other treatments except nitrogen and phosphorus. In 1988, tip moth infestations were uniformly low, with no differences in treatment effects observed.

基于多站扫描的点云特征参数与材积结构动态分析

【目的】采用地面激光雷达(TLS)进行多站点扫描获取立木的点云信息,提取有关点云分布的特征参数,拓展立木测树因子,建立基于特征参数的材积模型。【方法】以马褂木(Liriodendron chinense)人工林为研究对象,利用点云数据提供的立木上部直径(d)、树高(H)等因子对两期(2014、2017年)林分结构变化进行分析;设计并提取基于TLS点云的特征参数高度累计百分比,同时提取了其他与高度相关的特征参数作为一组变量;将提取的立木胸径(DBH)与特征参数作为另一组变量;最后分析特征参数、胸径与材积的相关性,通过逐步回归法分别建立基于两组变量的材积模型,并分析两期材积的动态变化。【结果】选用特征参数H25与Ht,var(点云高度方差)拟合两期材积模型,其决定系数R2分别为0.7711、0.7426;利用特征参数H25与胸径拟合,模型预测精度有明显的提升。以上两组材积模型预测各径阶材积变化,其模型值与实测值无显著差异,R2均高于0.9。【结论】研究提取的高度累计百分比与立木测树因子紧密相关,可以很好地反演林木的动态结构。研究建立的材积模型均有较高的精度,可用于林木材积动态变化监测,为地面激光扫描点云参与森林资源动态监测提供理论参考。