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Single-cell RNA-seq reveals the transcriptional program underlying tumor progression and metastasis in neuroblastoma
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作者 Zhe Nian Dan Wang +7 位作者 Hao Wang Wenxu Liu Zhenyi Ma Jie Yan Yanna Cao Jie Li Qiang Zhao Zhe Liu 《Frontiers of Medicine》 SCIE CSCD 2024年第4期690-707,共18页
Neuroblastoma(NB)is one of the most common childhood malignancies.Sixty percent of patients present with widely disseminated clinical signs at diagnosis and exhibit poor outcomes.However,the molecular mechanisms trigg... Neuroblastoma(NB)is one of the most common childhood malignancies.Sixty percent of patients present with widely disseminated clinical signs at diagnosis and exhibit poor outcomes.However,the molecular mechanisms triggering NB metastasis remain largely uncharacterized.In this study,we generated a transcriptomic atlas of 15447 NB cells from eight NB samples,including paired samples of primary tumors and bone marrow metastases.We used time-resolved analysis to chart the evolutionary trajectory of NB cells from the primary tumor to the metastases in the same patient and identified a common‘starter’subpopulation that initiates tumor development and metastasis.The‘starter’population exhibited high expression levels of multiple cell cycle-related genes,indicating the important role of cell cycle upregulation in NB tumor progression.In addition,our evolutionary trajectory analysis demonstrated the involvement of partial epithelial-to-mesenchymal transition(p-EMT)along the metastatic route from the primary site to the bone marrow.Our study provides insights into the program driving NB metastasis and presents a signature of metastasis-initiating cells as an independent prognostic indicator and potential therapeutic target to inhibit the initiation of NB metastasis. 展开更多
关键词 single-cell RNA sequencing METASTASIS NEUROBLASTOMA epithelial-to-mesenchymal transition
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Single nucleotide variants in lung cancer
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作者 Xiaoling Tian Zhe Liu 《Chinese Medical Journal Pulmonary and Critical Care Medicine》 2024年第2期88-94,共7页
Germline genetic variants,including single-nucleotide variants(SNVs)and copy number variants(CNVs),account for interpatient heterogeneity.In the past several decades,genome-wide association studies(GWAS)have iden-tifi... Germline genetic variants,including single-nucleotide variants(SNVs)and copy number variants(CNVs),account for interpatient heterogeneity.In the past several decades,genome-wide association studies(GWAS)have iden-tified multiple lung cancer-associated SNVs in Caucasian and Chinese populations.These variants either reside within coding regions and change the structure and function of cancer-related proteins or reside within non-coding regions and alter the expression level of cancer-related proteins.The variants can be used not only for cancer risk assessment and prevention but also for the development of new therapies.In this review,we discuss the lung cancer-associated SNVs identified to date,their contributions to lung tumorigenesis and prognosis,and their potential use in predicting prognosis and implementing therapeutic strategies. 展开更多
关键词 Lung cancer Germline mutation Single nucleotide variants Susceptibility Outcome Precision medicine
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