Inventory and Management of Fungi Associated with Banana Plant through the Use of Allium ampeloprasum and Cymbopogon citratus Extracts

Despite the nutritional, economic and medicinal values of banana plant, independent of the region and production system is confronted with some diseases such as the fungi disease. These fungal diseases are responsible for the low yields. The objective of this study was to improve the sanitary state of banana plant. To achieve this objective, fungi associated with banana leaves were isolated on Potato Dextrose Agar (PDA) culture medium and their identification was done on the basis of morphological and microscopic characteristics using reference documents. Antifungal activity of Allium ampeloprasum and Cymbopogon citratus extracts were evaluated in vitro on agar medium on the development of Pseudocercospora fijiensis, P. musicola and Pestalopsis sp. The results showed that banana plant harbours a diversity of fungal species, the most frequent being P. fijiensis (51.58%), Pestalopsis sp. (15.47%) and P. musicola (12.03%). Aqueous extracts of C. citratus at the concentration of 15 mg/ml, inhibited 100% of the radial growth of P. fijiensis and Pestalopsis sp with a fungitoxic activity. Similarly, ethanolic extract A. ampeloprasum inhibited at 100% the radial growth of Pestalopsis sp. This antifungal activity was fungistatic. These results suggest that the aqueous and ethanol extracts of the tested plants could be used as alternatives to chemical products in the fight against banana diseases especially Sigatoka. Hence further studies need to be undertaken to isolate the active compounds from these extracts with fungicidal potential.

Toxic and Antifeedant Effects of Different Pesticidal Plant Extracts against Beet Armyworm (Spodoptera exigua)

The beet armyworm(BAW),Spodoptera exigua(Lepidoptera:Noctuidae)is a highly destructive pest of vegetables and field crops.Management of beet armyworm primarily relies on synthetic pesticides,which is threatening the beneficial community and environment.Most importantly,the BAW developed resistance to synthetic pesticides with making it difficult to manage.Therefore,alternative and environment-friendly pest management tactics are urgently required.The use of pesticidal plant extracts provides an effective way for a sustainable pest management program.To evaluate the use of pesticidal plant extracts against BAW,we selected six plant species(Lantana camara,Aloe vera,Azadirachta indica,Cymbopogon citratus,Nicotiana tabacum,and Ocimum basilicum)for initial screening experiment.Four out of six plant species such as A.indica,N.tabacum,C.citratus and O.basilicum showed promising mortality of more than 50%.Therefore,we selected these four plant extracts for the subsequent experiments.Through contact bioassay,A.indica showed high mortality 66.63%,followed by the N.tabacum 53.33%,at 10%w/v concentration.Similarly,N.tabacum showed the highest mortality rate,66%at 10%w/v concentration,followed by the A.indica 46%through feeding bioassay.Furthermore,the feeding deterrence assay showed that C.citratus had a high antifeedant index(−50)followed by A.indica(−39),and N.tabacum(−28).In living plant assay,the N.tabacum extract showed a low mean damage score 3.6 on living cotton plant followed by C.citratus 4.5 and A.indica 5.5.Hence,extracts of three plant species provided promising results against the BAW,which can minimize the use of synthetic chemicals,particularly for small landholding farmers.Further studies are also required to evaluate the effects of these plant extract against BAW on cotton plants under field conditions to optimize the further use.

Wild soybean(Glycine soja)transcription factor GsWRKY40 plays positive roles in plant salt tolerance

Wild soybean(Glycine soja),a relative of cultivated soybean,shows high adaptability to adverse environmental conditions.We identified and characterized a wild soybean transcription factor gene,GsWRKY40,that promotes plant salt stress.GsWRKY40 was highly expressed in wild soybean roots and was up-regulated by salt treatment.GsWRKY40 was localized in nucleus and demonstrated DNA-binding activities but without transcriptional activation.Mutation and overexpression of GsWRKY40 altered salt tolerance of Arabidopsis plants.To understand the molecular mechanism of GsWRKY40 in regulating plant salt resistance,we screened a cDNA library and identified a GsWRKY40 interacting protein GsbHLH92 by using yeast two-hybrid approach.The physical interaction of GsWRKY40 and GsbHLH92 was confirmed by co-immunoprecipitation(co-IP),GST pull-down,and bimolecular fluorescence complementation(BiFC)techniques.Intriguingly,co-overexpression of GsWRKY40 and GsbHLH92 resulted in higher salt tolerance and lower ROS levels than overexpression of GsWRKY40 or GsbHLH92 in composite soybean plants,suggesting that GsWRKY40 and GsbHLH92 may synergistically regulate plant salt resistance through inhibiting ROS production.qRT-PCR data indicated that the expression level of GmSPOD1 gene encoding peroxidase was cooperatively regulated by GsWRKY40 and GsbHLH92,which was confirmed by using a dual luciferase report system and yeast one-hybrid experiment.Our study reveals a pathway that GsWRKY40 and GsbHLH92 collaboratively up-regulate plant salt resistance through impeding GmSPOD1 expression and reducing ROS levels,providing a novel perspective on the regulatory mechanisms underlying plant tolerance to abiotic stresses.

Agronomic Performance, Stability Analysis and Evaluation of Anthracnose Disease Resistance of Common Bean Lines Derived by Marker-Assisted Backcrossing in Uganda

The present study focused on evaluating the agronomic performance, stability, and anthracnose resistance of common bean lines derived through Marker-Assisted Backcrossing in Uganda. Eight marker-assisted selection (MAS) backcross-derived bush bean lines with red seed types, alongside two checks, were evaluated in a randomized complete block design replicated two times in five locations for three consecutive crop-growing seasons in 2021 and 2022. The study aimed to identify lines with both high stable yields and enhanced resistance to anthracnose disease for potential release and utilization in future bean varietal development in Uganda. Agronomic traits, including days to 50% flowering, days to 90% physiological maturity, seed yield, seed yield components, and anthracnose disease reaction under natural infestation were assessed. The response to anthracnose disease was further assessed using six isolates of Colletotrichum lindemuthianum representing six different races. Results indicated that the agronomic performances of the MAS backcross-derived bush bean lines were statistically comparable to the recurrent parent NABE14. Specifically, six lines exhibited statistically equal to or higher performance than NABE14 in terms of seed yield, total number of seeds and number of pods per plant. The combined analysis of variance for seed yield showed significant (p Co-42 and Co-5 anthracnose resistance genes in the derived line. In conclusion, UGKT-B157-4, identified as the best-performing and stable genotype, demonstrates promise for release and use in future bean varietal development in Uganda, offering a combination of high yields and enhanced anthracnose disease resistance. The study provides valuable insights into the potential of Marker-Assisted Backcrossing in improving common bean varieties in the region.

Effect of Light Emitting Diodes (LEDs) on Growth, Mineral Composition, and Nutritional Value of Wheat & Lentil Sprouts

Sprouts are ready-to-eat and are recognized worldwide as functional components of the human diet.Recent advances in innovative agricultural techniques could enable an increase in the production of healthy food.The use of light-emitting diode(LED)in indoor agricultural production could alter the biological feedback loop,increasing the functional benefits of plant foods such as wheat and lentil sprouts and promoting the bioavailability of nutrients.The effects of white(W),red(R),and blue(B)light were investigated on the growth parameters and nutritional value of wheat and lentil sprouts.In the laboratory,seeds were sown under three different LED treat-ments:white,red,and blue light,while normal incandescent light served as a control.Percentage seed germina-tion improved by 18.34%and 12.67%for wheat and 18.34%and 12.67%for lentil sprouts under LED treatments R and B,respectively.An increase in total soluble protein and sugar by 33.4%and 9.23%in wheat and by 31.5%and 5.87%in lentils was observed under the R LED treatment.Vitamin C concentrations in wheat and lentils were significantly increased by R LED compared to all other treatments.Other parameters,including potassium and sodium concentrations,were significantly increased under red and blue light compared to the control;white light,on the other hand,significantly decreased all these parameters.According to the experimental data,red and blue LED light could be beneficial in the production of functional wheat and lentil sprouts with high nutrient concentrations.

Humic Acid Effects on Reducing Corn Leaf Burn Caused by Foliar Spray of Urea-Ammonium Nitrate at Different Humic Acid/Urea-Ammonium Nitrate Ratios

Technologies for reducing corn leaf burn caused by foliar spray of urea-ammonium nitrate (UAN) during the early growing season are limited. A field experiment was carried out to evaluate the effects of humic acid on corn leaf burn caused by foliar spray of undiluted UAN solution on corn canopy at Jackson, TN in 2018. Thirteen treatments of the mixtures of UAN and humic acid were evaluated at V6 of corn with different UAN application rates and different UAN/humic acid ratios. Leaf burn during 1 2, 3, 4, 5, 6, 7, and 14 days after UAN foliar spray significantly differed between with or without humic acid addition. The addition of humic acid to UAN significantly reduced leaf burn at each UAN application rate (15, 25, and 35 gal/acre). The reduction of leaf burn was enhanced as the humic acid/UAN ratio went up from 10% to 30%. Leaf burn due to foliar application of UAN became severer with higher UAN rates. The linear regression of leaf burn 14 days after application with humic acid/UAN ratio was highly significant and negative. However, the linear regression of leaf burn 14 days after application with the UAN application rate was highly significant and positive. In conclusion, adding humic acid to foliar-applied UAN is beneficial for reducing corn leaf burn during the early growing season.

Metabolic analyses reveal different mechanisms of leaf color change in two purple-leaf tea plant (Camellia sinensis L.) cultivars

Purple-leaf tea plants,as anthocyanin-rich cultivars,are valuable materials for manufacturing teas with unique colors or flavors.In this study,a new purple-leaf cultivar“Zixin”(“ZX”)was examined,and its biochemical variation and mechanism of leaf color change were elucidated.The metabolomes of leaves of“ZX”at completely purple,intermediately purple,and completely green stages were analyzed using ultra-performance liquid chromatography quadrupole time of flight mass spectrometry(UPLC-QTOF-MS).Metabolites in the flavonoid biosynthetic pathway remained at high levels in purple leaves,whereas intermediates of porphyrin and chlorophyll metabolism and carotenoid biosynthesis exhibited high levels in green leaves.In addition,fatty acid metabolism was more active in purple leaves,and steroids maintained higher levels in green leaves.Saponin,alcohol,organic acid,and terpenoid-related metabolites also changed significantly during the leaf color change process.Furthermore,the substance changes between“ZX”and“Zijuan”(a thoroughly studied purple-leaf cultivar)were also compared.The leaf color change in“Zijuan”was mainly caused by a decrease in flavonoids/anthocyanins.However,a decrease in flavonoids/anthocyanins,an enhancement of porphyrin,chlorophyll metabolism,carotenoid biosynthesis,and steroids,and a decrease in fatty acids synergistically caused the leaf color change in“ZX”.These findings will facilitate comprehensive research on the regulatory mechanisms of leaf color change in purple-leaf tea cultivars.

Growth,yield and water productivity of dry direct seeded rice and transplanted aromatic rice under different irrigation management regimes

Sustainability of traditionally cultivated rice in the rice-wheat cropping zone(RWCZ)of Pakistan is dwindling due to the high cost of production,declining water resources and escalating labour availability.Thus,farmers and researchers are compelled to find promising alternatives to traditional transplanted rice(TPR).A field study was conducted in Punjab,Pakistan,in 2017 and 2018 to explore the trade-offs between water saving and paddy yield,water productivity and economics of two aromatic rice varieties under dry direct seeded rice(DDSR)and TPR.The experiment was comprised of three irrigation regimes on the basis of soil moisture tension(SMT)viz.,continuous flooded(>–10 kPa SMT),alternate wetting and drying(AWD)(–20 kPa SMT)and aerobic rice(–40 kPa SMT),maintained under TPR and DDSR systems.Two aromatic rice verities:Basmati-515 and Chenab Basmati-2016 were used during both years of study.In both years,DDSR produced higher yields(13–18%)and reduced the total water inputs(8–12%)in comparison to TPR.In comparison to traditional continuous flooded(CF),AWD under DDSR reduced total water input by 27–29%and improved the leaf area index(LAI),tillering,yield(7–9%),and water productivity(44–50%).The performance of AWD with regard to water savings and increased productivity was much higher in DDSR system as compared to AWD in TPR system.Cultivation of DDSR with aerobic irrigation improved water savings(49–55%)and water productivity(22–30%)at the expense of paddy yield reduction(36–39%)and spikelet sterility.With regard to variety,the highest paddy yield(6.6 and 6.7 t ha–1)was recorded in DDSR using Chenab Basmati-2016 under AWD irrigation threshold that attributed to high tiller density and LAI.The economic analysis showed DDSR as more beneficial rice establishment method than TPR with a high benefit-cost ratio(BCR)when the crop was irrigated with AWD irrigation threshold.Our results highlighted that with the use of short duration varieties,DDSR cultivation in conjunction with AWD irrigation can be more beneficial for higher productivity and crop yield.

Controlling plant architecture by manipulation of gibberellicacid signalling in petunia

Since stem elongation is a gibberellic acid(GA)response,GA inhibitors are commonly used to control plant height in the production of potted ornamentals and bedding plants.In this study,we investigated interfering with GA signaling by using molecular techniques as an alternative approach.We isolated three putative GID1 genes(PhGID1A,PhGID1B and PhGID1C)encoding GA receptors from petunia.Virus-induced gene silencing(VIGS)of these genes results in stunted growth,dark-green leaves and late-flowering.We also isolated the gai mutant gene(gai-1)from Arabidopsis.We have generated transgenic petunia plants in which the gai mutant protein is over-expressed under the control of a dexamethasone-inducible promoter.This system permits induction of the dominant Arabidopsis gai mutant gene at a desired stage of plant development in petunia plants by the application of dexamethasone(Dex).The induction of gai in Dex-treated T1 petunia seedlings caused dramatic growth retardation with short internodes.

Effects of light emitting diode lights on plant growth,development and traits a meta-analysis

The various monochromatic Light Emitting Diode(LED)lights are widely used in growth facility for cultivating various plants,particularly horticultural crops because of their higher luminous efficiency,lower radiation and power consumption than the traditional white fluorescent lamp light.However,considerable inconsistent effects have been reported in literature.We conducted a meta-analysis to assess the effects of different colors of LED light on plant growth,development and various traits.Compared to the light from white fluorescent lamps,the red LED light significantly changed 4 out 26 plant characteristics by at least 37%,and blue LED light significantly increased 5 of 26 assessed characteristics by 37%or more.The combination of red/blue LED lights only significantly increased dry weight by 161%among 25 plant characteristics analyzed.Compared to the white LED light,red LED light significantly decreased 2 of 9 plant characteristics by at least 36%,and blue LED light significantly decreased only 1 of 9 plant characteristics,total chlorophyll content,by 42%.In the moderators analyzed,plant taxonomic families significantly influenced the effects of LED lights on shoot dry weight,and plant life cycles and plant taxonomic families significantly affected the effect on stomatal conductance.Through systematic meta-analysis,we found that the effect of LED on plant growth and quality traits was speciesspecific,and the effect was affected by the cultivation conditions.Therefore,we suggest that researchers be more targeted to experiment,and collect traits associated with practical production,especially related to the quality of product data,such as carotenoids,anthocyanin and other antioxidant compounds.This article is to provide more data with practical application,guide the application of LED in horticultural plant factory.

Plant Communities and Factors Responsible for Vegetation Pattern in an Alpine Area of the Northwestern Himalaya

The study intended to describe the alpine vegetation of a protected area of the northwestern Himalaya and identify the important environmental variables responsible for species distribution.We placed random plots covering different habitats and altitude to record species composition and environmental variables.Vegetation was classified using hierarchical cluster analysis and vegetation-environment relationships were evaluated with Canonical Correspondence Analysis.Four communities,each in alpine shrub and meadows were delineated and well justified in the ordination plots.Indicator species for the different communities were identified.Maximum species richness and diversity were found in community IV among shrub communities and community II among the meadows.Studied environmental variables explained 61.5% variation in shrub vegetation and 59.8% variation in meadows.Soil variables explained higher variability (～35%) than spatial variables (～21%) in both shrubs and meadows.Altitude,among the spatial variables and carbon/nitrogen ratio and nitrogen among the soil variables explained maximum variation.About 40% variations left unexplained.Latitude and species diversity among the other variables had significant correlation with ordination axes.Study showed that altitude and C/N ratio played a significant role in species composition.Extensive sampling efforts and inclusion of other non-studied variables are also suggested for better understanding.

A method for the production and expedient screening of CRISPR/Cas9-mediated non-transgenic mutant plants

Developing CRISPR/Cas9-mediated non-transgenic mutants in asexually propagated perennial crop plants is challenging but highly desirable.Here,we report a highly useful method using an Agrobacterium-mediated transient CRISPR/Cas9 gene expression system to create non-transgenic mutant plants without the need for sexual segregation.We have also developed a rapid,cost-effective,and high-throughput mutant screening protocol based on Illumina sequencing followed by high-resolution melting(HRM)analysis.Using tetraploid tobacco as a model species and the phytoene desaturase(PDS)gene as a target,we successfully created and expediently identified mutant plants,which were verified as tetra-allelic mutants.We produced pds mutant shoots at a rate of 47.5%from tobacco leaf explants,without the use of antibiotic selection.Among these pds plants,17.2%were confirmed to be non-transgenic,for an overall non-transgenic mutation rate of 8.2%.Our method is reliable and effective in creating non-transgenic mutant plants without the need to segregate out transgenes through sexual reproduction.This method should be applicable to many economically important,heterozygous,perennial crop species that are more difficult to regenerate.

Endogenous auxin and its manipulation influence in vitro shoot organogenesis of citrus epicotyl explants

Endogenous auxin is an important regulator of in vivo organ development,but its role in in vitro organogenesis is unclear.It has been observed that the basal end of epicotyl cuttings of juvenile citrus seedlings produces fewer shoots than the apical end.Here,we report that elevated endogenous auxin levels in the basal end of citrus epicotyl cuttings are inhibitory for in vitro shoot organogenesis.Using transgenic citrus plants expressing an auxin-inducible GUS reporter gene,we have observed elevated levels of auxin at the basal end of stem cuttings that are mediated by polar auxin transport.Depleting endogenous auxin or blocking polar auxin transport enhances shoot organogenesis.An auxin transport inhibitor,N-1-naphthylphthalamic acid(NPA),can also enhance shoot organogenesis independent of its action on polar auxin transport.Finally,we demonstrate that the promotional effects of depleting endogenous auxin or blocking polar auxin transport on shoot organogenesis are cytokinin-dependent.Our study thus provides meaningful insights into possible roles of endogenous auxin and polar auxin transport,as well as auxin–cytokinin interactions,in in vitro shoot organogenesis.Meanwhile,our results may also provide practical strategies for improving in vitro shoot organogenesis for citrus and many other plant species.

Plant functional type approach for a functional interpretation of altitudinal vegetation zones in the Alborz Mts., Iran

Mountains are an excellent system for evaluating ecological and biogeographical patterns. The obvious variations of the environmental factors along the altitude create different zones with adapted plant assemblages. However, few studies make use of plant functional type(PFT) for describing the variation of vegetation along altitudinal gradients. A PFT is a group of taxa with similar traits which respond similarly to the environmental gradients. In this study, we used PFTs as indicators describing five vegetation zones in the western Alborz Mt, Iran from 2000 – 4500 m. The plant trait data presented here covers six plant traits including growth form, stemleaf ratio, spinescence, hairiness, leaf consistency and plant height of 297 species. We considered altitude and soil factors to test the importance of environmental variables. We applied a multivariate analysis of three table ordination, i.e. environmental, species, and traits data to identify the PFTs. We further applied fourth-corner statistic to quantify trait-environment relationships. A constrained hierarchical clustering was used to detect five altitudinal zones and two zones of low and high nitrogen concentration. With regard to altitude wediscuss the distribution of species, traits and PFTs. Growth form, plant height and stem-leaf ratio were significantly related to altitude and nitrogen. We identified 19 PFTs from which 18 were significantly associated to one or more altitudinal zones. While the lower altitudinal zones contain a variety of PFTs higher altitudes contain less PFTs with the highest altitude containing only one single PFT, tiny rosette plants with soft mesomorphic leaves. We identified grazing and climatic harshness as well as rockiness as the most important drivers of the distribution of plant functional traits and types across the studied gradient.

Characterization of spermidine hydroxycinnamoyl transferases from eggplant (Solanum melongena L.) and its wild relative Solanum richardii Dunal

Eggplant produces a variety of hydroxycinnamic acid amides(HCAAs)that have an important role in plant development and adaptation to environmental changes.In this study,we identified and characterized a spermidine hydroxycinnamoyl transferase(SHT)from eggplant(Solanum melongena)and its wild relative S.richardii,designated as SmSHT and SrSHT,respectively.SmSHT was abundant in flowers and fruits,whereas the level of SrSHT was remarkably low in all tissues.Heat-shock/drought treatment stimulated the expression of SmSHT in both leaves and fruits,indicating its involvement in plant stress response.Both SHT polypeptides had extremely high identity with just five amino-acid substitutions.Recombinant SmSHT catalyzed the synthesis of mono-,bi-and tri-acylated polyamines.Using caffeoyl-CoA as the acyl donor,SmSHT preferred spermidine as the acyl acceptor.When spermidine was the acyl acceptor,the donor preference order for SmSHT was caffeoyl-CoA>feruloyl-CoA>ρ-coumaroyl-CoA.SrSHT exhibited the same substrate specificity as SmSHT,yet exhibited significantly higher catalytic activity than SmSHT.For example,under caffeoyl-CoA and spermidine,Kcat of SrSHT was 37.3%higher than SmSHT.Molecular modeling suggests that five amino-acid substitutions in SrSHT result in four alterations in their predicted 3D structures.In particular,the conserved Lys402 adjacent to the DFGWG motif,and Cys200 in the crossover loop in SmSHT were replaced by Glu and Ser in SrSHT.These substitutions may contribute to the enhanced activity in SrSHT.Our study provides a platform to generate HCAA rich fruits for eggplant and other solanaceous crops.

Expanding the application of a UV-visible reporter for transient gene expression and stable transformation in plants

Green fl uorescent protein(GFP)has been widely used for monitoring gene expression and protein localization in diverse organisms.However,highly sensitive imaging equipment,like fl uorescence microscope,is usually required for the visualization of GFP,limitings its application to fi xed locations in samples.A reporter that can be visualized in realtime regardless the shape,size and location of the target samples will increase the fl exibility and ef fi ciency of research work.Here,we report the application of a GFP-like protein,called eYGFPuv,in both transient expression and stable transformation,in two herbaceous plant species(Arabidopsis and tobacco)and two woody plant species(poplar and citrus).We observed bright fl uorescence under UV light in all of the four plant species without any effects on plant growth or development.eYGFPuv was shown to be effective for imaging transient expression in leaf and root tissues.With a focus on in vitro transformation,we demonstrated that the transgenic events expressing 1x eYGFPuv could be easily identi fi ed visually during the callus stage and the shoot stage,enabling early and ef fi cient selection of transformants.Furthermore,whole-plant level visualization of eYGFPuv revealed its ubiquitous stability in transgenic plants.In addition,our transformation experiments showed that eYGFPuv can also be used to select transgenic plants without antibiotics.This work demonstrates the feasibility of utilizing 1x eYGFPuv in studies of gene expression and plant transformation in diverse plants.

Effects of Planting Methods on Root Yield and Nutrient Removal of Five Cassava Cultivars Planted in Late Rainy Season in Northeastern Thailand

The objectives of this study were to evaluate growth, yield and nutrients removal of five cassava cultivars planted by different planting methods in late rainy season of northeastern Thailand. A split plot design was used in this study. The planting methods (vertical and horizontal) were assigned as main-plots. Cassava cultivars (Rayong-7, Rayong-11, Rayong-72, Huaybong-80 and E-dum) were assigned as sub-plots with four replications. Results showed that vertical planting gave significantly higher fresh storage root yield than those of horizontal planting, across five cassava cultivars. The cultivar Rayong-7 produced maximum fresh storage root yield across two planting methods, but not significantly different from Rayong 11, Huaybong 80 and Edum cultivars. Irrespective of nutrient removal, N, P and K removed ranges from 2.9 - 3.6, 0.8 - 1.3 and 5.3 - 7.9 kg per ton fresh root weight, respectively depending on cassava cultivar. The cultivar Rayong-7 removed the highest quantities of N, and the cultivar Rayong-11 removed maximum of P and K in the present study. Regardless of nutrient removal at different plant parts;N, P and K removed maximum quantities in leaf, stem and storage root, respectively. Planting method had no significant effect on N and P removal, but significant effect on K removal. The vertical planting removed K higher than those of horizontal planting.

Whole-genome,transcriptome,and methylome analyses provide insights into the evolution of platycoside biosynthesis in Platycodon grandiflorus,a medicinal plant

Triterpenoid saponins(TSs)are common plant defense phytochemicals with potential pharmaceutical properties.Platycodon grandiflorus(Campanulaceae)has been traditionally used to treat bronchitis and asthma in East Asia.The oleanane-type TSs,platycosides,are a major component of the P.grandiflorus root extract.Recent studies show that platycosides exhibit anti-inflammatory,antiobesity,anticancer,antiviral,and antiallergy properties.However,the evolutionary history of platycoside biosynthesis genes remains unknown.In this study,we sequenced the genome of P.grandiflorus and investigated the genes involved in platycoside biosynthesis.The draft genome of P.grandiflorus is 680.1 Mb long and contains 40,017 protein-coding genes.Genomic analysis revealed that the CYP716 family genes play a major role in platycoside oxidation.The CYP716 gene family of P.grandiflorus was much larger than that of other Asterid species.Orthologous gene annotation also revealed the expansion ofβ-amyrin synthases(bASs)in P.grandiflorus,which was confirmed by tissue-specific gene expression.In these expanded gene families,we identified key genes showing preferential expression in roots and association with platycoside biosynthesis.In addition,wholegenome bisulfite sequencing showed that CYP716 and bAS genes are hypomethylated in P.grandiflorus,suggesting that epigenetic modification of these two gene families affects platycoside biosynthesis.Thus whole-genome,transcriptome,and methylome data of P.grandiflorus provide novel insights into the regulation of platycoside biosynthesis by CYP716 and bAS gene families.

An optimized procedure for plant recovery from somatic embryos significantly facilitates the genetic improvement of Vitis

Plant regeneration from grapevine(Vitis spp.)via somatic embryogenesis typically is poor.Recovery of plants from Vitis rotundifolia Michx.(muscadine grape)is particularly problematic due to extremely low efficiency,including extended culture durations required for embryo–plant conversion.Poor plant recovery is an obstacle to the selection of improved genetically modified lines.Somatic embryos(SEs)of V.rotundifolia cultivar Delicious(Del-HS)and Vitis vinifera L cultivar Thompson Seedless(TS)were used to identify culture media and conditions that promoted embryo differentiation and plant conversion;this resulted in a two-step culture system.In comparative culture experiments,C2D medium containing 6%sucrose was the most effective,among four distinct formulae tested,for inducing precocious SE germination and cell differentiation.This medium,further supplemented with 4 mM 6-benzylaminopurine(C2D4B),was subsequently determined to enhance post-germinative growth of SE.MS medium supplemented with 0.5 mM 1-naphthaleneacetic acid(MSN)was then utilized to stimulate root and shoot growth of germinated SE.An average of 35%and 80%‘Del-HS’and‘TS’SE,respectively,developed into plants.All plants developed robust root and shoot systems and exhibited excellent survival following transfer to soil.Over 150 plants of‘Del-HS’were regenerated and established within 2.5 months,which is a dramatic reduction from the 6-to 12-month time period previously required.Similarly,88‘TS’plant lines were obtained within the same time period.Subsequently,seven out of eight Vitis cultivars exhibited significantly increased plant conversion percentages,demonstrating broad application of the two-step culture system to produce the large numbers of independent plant lines needed for selection of desired traits.

Planting Date, Seeding Rate, and Cultivar Impact Agronomic Traits and Semolina of Durum Wheat

Durum wheat (Triticum durum Desf.) is a market class of wheat subject to price discounts in the marketplace if quality standards are not met. This study was conducted in order to determine how certain agronomic practices might impact durum wheat quality. The effects of planting date (PD), cultivar, and seeding rate on agronomic and semolina quality traits were investigated in field trials conducted near Hettinger and Minot, ND in 2014 and 2015. The interaction of PD and cultivar was significant for many of the traits evaluated. There was a significant PD X cultivar interaction or PD and cultivar effect for yield in all environments. Planting date X cultivar interacted for test weight at all environments. In general, a delay in PD resulted in a significant decrease in yield and test weight for all cultivars. However, Carpio yielded more than other cultivars in high yielding environments while the yield and test weight of Joppa was more adversely affected by delays in PD. Seeding rate did not have a consistent effect on any agronomic or quality trait. Protein content, kernel yellow pigment content, falling number (FN), and vitreous kernels were more dependent on cultivar, regardless of PD and environment. Semolina extraction, gluten index (GI), and wet gluten (WG) values tended to decrease with a delay in PD. These data continue to support cultivar selection as a critical component for obtaining high-yielding, high-quality durum wheat. However, PD and environment can impact certain agronomic and end-use traits, regardless of cultivar grown.